| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609259
Identifier: 86609259
GI number: 86609259
Start: 1887577
End: 1887981
Strand: Reverse
Name: 86609259
Synonym: CYB_1801
Alternate gene names: NA
Gene position: 1887981-1887577 (Counterclockwise)
Preceding gene: 86609260
Following gene: 86609258
Centisome position: 61.97
GC content: 55.06
Gene sequence:
>405_bases ATGGTAGGCATCTTCAAGCGCTTGTTCGGCTCGCGCGGCAAAGCTGCGGCCACGTCCTCACCGGAAACTGTTGCTAAGCC AACCCCAAAGAAAGCGAAAAACGACAATACTTTTTTTCTCGACCCAGATGAAGCCAAAACCCTTGGCAACATCGAGTATA TGCGCACCCCCAGGATCGTGAAGCACACCTTCCAGGATTTCGGCAGCAAGGAGAAGGTGGAGGTGGTGGAGCAGGTCTCT TCCCTCAGCAAAGTTAAGTTGTCCACAGAGCAAGCCAAAACTCCTGAAACTGCTGCTGAGCAGGGATCCTCCGCTTCAAG CAGCAGCGGAGCAAGCCCACGCCGTCAGGGGGGATCGGACATGGATACCTTCCGCAATATGGCCCGCAGCCTGAGACGCA AATAG
Upstream 100 bases:
>100_bases TCATGACCGGGCCTGGCCCTCACCTTGCCAAGGGCGGGTGGCCAATATCAGTGCCTAGGGATCCGGCTCAACTTCCTTAC CCATTGCAGGCAAAACGACC
Downstream 100 bases:
>100_bases GCCAAATTCAGGTTGATCCCCGTCAGAGCCGAGCCAGAGGCTGGATCCCAGCTTTCTTCTTCACGGCAGCGGCAGGCGTG ATACAACTGCTATCGAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MVGIFKRLFGSRGKAAATSSPETVAKPTPKKAKNDNTFFLDPDEAKTLGNIEYMRTPRIVKHTFQDFGSKEKVEVVEQVS SLSKVKLSTEQAKTPETAAEQGSSASSSSGASPRRQGGSDMDTFRNMARSLRRK
Sequences:
>Translated_134_residues MVGIFKRLFGSRGKAAATSSPETVAKPTPKKAKNDNTFFLDPDEAKTLGNIEYMRTPRIVKHTFQDFGSKEKVEVVEQVS SLSKVKLSTEQAKTPETAAEQGSSASSSSGASPRRQGGSDMDTFRNMARSLRRK >Mature_134_residues MVGIFKRLFGSRGKAAATSSPETVAKPTPKKAKNDNTFFLDPDEAKTLGNIEYMRTPRIVKHTFQDFGSKEKVEVVEQVS SLSKVKLSTEQAKTPETAAEQGSSASSSSGASPRRQGGSDMDTFRNMARSLRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14630; Mature: 14630
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGIFKRLFGSRGKAAATSSPETVAKPTPKKAKNDNTFFLDPDEAKTLGNIEYMRTPRIV CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHCCHHH KHTFQDFGSKEKVEVVEQVSSLSKVKLSTEQAKTPETAAEQGSSASSSSGASPRRQGGSD HHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCH MDTFRNMARSLRRK HHHHHHHHHHHHCC >Mature Secondary Structure MVGIFKRLFGSRGKAAATSSPETVAKPTPKKAKNDNTFFLDPDEAKTLGNIEYMRTPRIV CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHCCHHH KHTFQDFGSKEKVEVVEQVSSLSKVKLSTEQAKTPETAAEQGSSASSSSGASPRRQGGSD HHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCH MDTFRNMARSLRRK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA