Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609222

Identifier: 86609222

GI number: 86609222

Start: 1847726

End: 1849105

Strand: Reverse

Name: 86609222

Synonym: CYB_1764

Alternate gene names: NA

Gene position: 1849105-1847726 (Counterclockwise)

Preceding gene: 86609223

Following gene: 86609221

Centisome position: 60.69

GC content: 61.16

Gene sequence:

>1380_bases
ATGCAAGGCGTACTGCTGATCCTCTACATGTTGGTTGTCAGTGGCCTGATTGCCGTTGTTGGGGATCGGGTGGGCTACCG
CATTGGCAAAAAGCGCCTTACCTGGTTTAACCTGCGCCCCCGCCATACCGCCATTCTGGTGGCCGTGGTGACCGGCGTGA
GCATCTCCGCCCTGACTTTGGGCACACTGCTGCTCCTCAACCGCTCTCTGTCGGAGGCCCTGTTCAGCTACACCAACCAA
ATTGCCCAGGCGGAGCAAGAGCTGCGGGCCCTCAACCGCCAAAAAGCCCTCTTGGAAGCGGAAAATGCCGCTCTCAGGGT
TGAGCGAGACCACCTCAAGATGGATCTCGACCAATTTCGCAGCCAGCAGTCGGCAGCCCAAACCCGCCTGAGCGAAGTGC
GCGATCAGCTGGCAGTGGCGCTGCAGGAGCGGCAGGAGGCGGAGGCCAAGCTGGCGGCAGCCAACGAGCAACTGGCCAAG
GTGCAGCCCAGTTTGGATCGAGCCCATGCCGAGTTGGAGGCAGTGAAGGCAGAGGTGGAGTCGGCCCGCCAGGTGATCGC
CACCCTGGAGTCGCAAAAACAAGCCCTGCAACTGGATCGGGATCAGCTGGAGCGCTCCCTGGATGTGGTGCAGGCGGCCT
TAACCCAACTGGAGAACCAGAAAAACCAGCTTGAGCAGGAGATCGAGCAGCTCAACCAATTGGCGGTGCGGCTGCGGCGG
GGGGAACTGGCCATCTTGGCGGGGGAAGTTTTGGCAACAGGAGTTGTGGAGGCTCCAAGAGGGGCAAAACCAGAGGCGAT
CCGGCGGCAGTTTGAGCACCTTTTGGCCCAGGCGGAACAGCGGGCCCTTGCCCTTGGATCCCAGCCCATGCCCCCTCTGG
AAAACGCGATCTTGATCCGCCGCGAGGATGCCGATCAAGCCTTGGAGAAGTTGCAAGAGCCCGGTAGCTGGGCGGTGCGC
ATTCTCTCTGTTACCAACCGGCTCAAGGGGGAGCCTGTGCCTGTGCTCGTGCAGATTTACCCCAACCAGCGGATTTTCGC
CAAGGGATCCGTGCTGGCCCACGGGGTGATTCAACCGGGTTTGAGCGAAAATCAGATCCAACAGCAACTGCTGGGGCTGC
TGAACCAGGCCAATCAGCGCTCGCAAGAGGAGGGGCTTCTCTCCGATCCCATCACCGGCACTGTGGGGGAGTTCTCCCAG
GTCAAGTTTCTGGAGGTTGTGCAGCATCTCCGCCAGAGCACCACCCCTCTGGATGTGAAGCTAGTTGCCGACACCGACAT
CTACACGGCAGGACCGTTGCGGGTGAGTTTTCTGATGGCGGAAGCTTCTGGTCAACCCGGCTCTTCTGGGGCTCAGCAGG
CGGGGCGTCCTGAGGGATGA

Upstream 100 bases:

>100_bases
CCAAAAATCCCTACAAAACAGCGCCGAAATCTATCTCCCAGCAACTTGCAAAATCCTCAGGGCAACCTTGCTAAGATTTC
CATGGCAGGGATCCGCGAAT

Downstream 100 bases:

>100_bases
CGGATTCACTCCATTCGGCAAGGCTGAAGAGCGAACGAGTGCTGATCGGTTTCGACCCAGGGCGCGACAAATGCGGCATT
GCTGTGGTGCAGGTGTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTLGTLLLLNRSLSEALFSYTNQ
IAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFRSQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAK
VQPSLDRAHAELEAVKAEVESARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR
GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIRREDADQALEKLQEPGSWAVR
ILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPGLSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQ
VKFLEVVQHLRQSTTPLDVKLVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG

Sequences:

>Translated_459_residues
MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTLGTLLLLNRSLSEALFSYTNQ
IAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFRSQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAK
VQPSLDRAHAELEAVKAEVESARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR
GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIRREDADQALEKLQEPGSWAVR
ILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPGLSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQ
VKFLEVVQHLRQSTTPLDVKLVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG
>Mature_459_residues
MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTLGTLLLLNRSLSEALFSYTNQ
IAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFRSQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAK
VQPSLDRAHAELEAVKAEVESARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR
GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIRREDADQALEKLQEPGSWAVR
ILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPGLSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQ
VKFLEVVQHLRQSTTPLDVKLVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG

Specific function: Unknown

COG id: COG4372

COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021435 [H]

Pfam domain/function: PF11283 DUF3084 [H]

EC number: NA

Molecular weight: Translated: 50429; Mature: 50429

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH
GTLLLLNRSLSEALFSYTNQIAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
SQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAKVQPSLDRAHAELEAVKAEVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIR
CCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
REDADQALEKLQEPGSWAVRILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPG
ECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCC
LSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQVKFLEVVQHLRQSTTPLDVK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG
EEECCCCEECCCCEEEEEEEECCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH
GTLLLLNRSLSEALFSYTNQIAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
SQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAKVQPSLDRAHAELEAVKAEVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIR
CCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
REDADQALEKLQEPGSWAVRILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPG
ECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCC
LSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQVKFLEVVQHLRQSTTPLDVK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG
EEECCCCEECCCCEEEEEEEECCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840; 8391534 [H]