| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609222
Identifier: 86609222
GI number: 86609222
Start: 1847726
End: 1849105
Strand: Reverse
Name: 86609222
Synonym: CYB_1764
Alternate gene names: NA
Gene position: 1849105-1847726 (Counterclockwise)
Preceding gene: 86609223
Following gene: 86609221
Centisome position: 60.69
GC content: 61.16
Gene sequence:
>1380_bases ATGCAAGGCGTACTGCTGATCCTCTACATGTTGGTTGTCAGTGGCCTGATTGCCGTTGTTGGGGATCGGGTGGGCTACCG CATTGGCAAAAAGCGCCTTACCTGGTTTAACCTGCGCCCCCGCCATACCGCCATTCTGGTGGCCGTGGTGACCGGCGTGA GCATCTCCGCCCTGACTTTGGGCACACTGCTGCTCCTCAACCGCTCTCTGTCGGAGGCCCTGTTCAGCTACACCAACCAA ATTGCCCAGGCGGAGCAAGAGCTGCGGGCCCTCAACCGCCAAAAAGCCCTCTTGGAAGCGGAAAATGCCGCTCTCAGGGT TGAGCGAGACCACCTCAAGATGGATCTCGACCAATTTCGCAGCCAGCAGTCGGCAGCCCAAACCCGCCTGAGCGAAGTGC GCGATCAGCTGGCAGTGGCGCTGCAGGAGCGGCAGGAGGCGGAGGCCAAGCTGGCGGCAGCCAACGAGCAACTGGCCAAG GTGCAGCCCAGTTTGGATCGAGCCCATGCCGAGTTGGAGGCAGTGAAGGCAGAGGTGGAGTCGGCCCGCCAGGTGATCGC CACCCTGGAGTCGCAAAAACAAGCCCTGCAACTGGATCGGGATCAGCTGGAGCGCTCCCTGGATGTGGTGCAGGCGGCCT TAACCCAACTGGAGAACCAGAAAAACCAGCTTGAGCAGGAGATCGAGCAGCTCAACCAATTGGCGGTGCGGCTGCGGCGG GGGGAACTGGCCATCTTGGCGGGGGAAGTTTTGGCAACAGGAGTTGTGGAGGCTCCAAGAGGGGCAAAACCAGAGGCGAT CCGGCGGCAGTTTGAGCACCTTTTGGCCCAGGCGGAACAGCGGGCCCTTGCCCTTGGATCCCAGCCCATGCCCCCTCTGG AAAACGCGATCTTGATCCGCCGCGAGGATGCCGATCAAGCCTTGGAGAAGTTGCAAGAGCCCGGTAGCTGGGCGGTGCGC ATTCTCTCTGTTACCAACCGGCTCAAGGGGGAGCCTGTGCCTGTGCTCGTGCAGATTTACCCCAACCAGCGGATTTTCGC CAAGGGATCCGTGCTGGCCCACGGGGTGATTCAACCGGGTTTGAGCGAAAATCAGATCCAACAGCAACTGCTGGGGCTGC TGAACCAGGCCAATCAGCGCTCGCAAGAGGAGGGGCTTCTCTCCGATCCCATCACCGGCACTGTGGGGGAGTTCTCCCAG GTCAAGTTTCTGGAGGTTGTGCAGCATCTCCGCCAGAGCACCACCCCTCTGGATGTGAAGCTAGTTGCCGACACCGACAT CTACACGGCAGGACCGTTGCGGGTGAGTTTTCTGATGGCGGAAGCTTCTGGTCAACCCGGCTCTTCTGGGGCTCAGCAGG CGGGGCGTCCTGAGGGATGA
Upstream 100 bases:
>100_bases CCAAAAATCCCTACAAAACAGCGCCGAAATCTATCTCCCAGCAACTTGCAAAATCCTCAGGGCAACCTTGCTAAGATTTC CATGGCAGGGATCCGCGAAT
Downstream 100 bases:
>100_bases CGGATTCACTCCATTCGGCAAGGCTGAAGAGCGAACGAGTGCTGATCGGTTTCGACCCAGGGCGCGACAAATGCGGCATT GCTGTGGTGCAGGTGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTLGTLLLLNRSLSEALFSYTNQ IAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFRSQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAK VQPSLDRAHAELEAVKAEVESARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIRREDADQALEKLQEPGSWAVR ILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPGLSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQ VKFLEVVQHLRQSTTPLDVKLVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG
Sequences:
>Translated_459_residues MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTLGTLLLLNRSLSEALFSYTNQ IAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFRSQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAK VQPSLDRAHAELEAVKAEVESARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIRREDADQALEKLQEPGSWAVR ILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPGLSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQ VKFLEVVQHLRQSTTPLDVKLVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG >Mature_459_residues MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTLGTLLLLNRSLSEALFSYTNQ IAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFRSQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAK VQPSLDRAHAELEAVKAEVESARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIRREDADQALEKLQEPGSWAVR ILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPGLSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQ VKFLEVVQHLRQSTTPLDVKLVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG
Specific function: Unknown
COG id: COG4372
COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021435 [H]
Pfam domain/function: PF11283 DUF3084 [H]
EC number: NA
Molecular weight: Translated: 50429; Mature: 50429
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH GTLLLLNRSLSEALFSYTNQIAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH SQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAKVQPSLDRAHAELEAVKAEVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIR CCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE REDADQALEKLQEPGSWAVRILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPG ECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCC LSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQVKFLEVVQHLRQSTTPLDVK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE LVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG EEECCCCEECCCCEEEEEEEECCCCCCCCCHHCCCCCCC >Mature Secondary Structure MQGVLLILYMLVVSGLIAVVGDRVGYRIGKKRLTWFNLRPRHTAILVAVVTGVSISALTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH GTLLLLNRSLSEALFSYTNQIAQAEQELRALNRQKALLEAENAALRVERDHLKMDLDQFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH SQQSAAQTRLSEVRDQLAVALQERQEAEAKLAAANEQLAKVQPSLDRAHAELEAVKAEVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SARQVIATLESQKQALQLDRDQLERSLDVVQAALTQLENQKNQLEQEIEQLNQLAVRLRR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GELAILAGEVLATGVVEAPRGAKPEAIRRQFEHLLAQAEQRALALGSQPMPPLENAILIR CCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE REDADQALEKLQEPGSWAVRILSVTNRLKGEPVPVLVQIYPNQRIFAKGSVLAHGVIQPG ECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCC LSENQIQQQLLGLLNQANQRSQEEGLLSDPITGTVGEFSQVKFLEVVQHLRQSTTPLDVK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE LVADTDIYTAGPLRVSFLMAEASGQPGSSGAQQAGRPEG EEECCCCEECCCCEEEEEEEECCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11759840; 8391534 [H]