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The map label for this gene is ndh [H]

Identifier: 86609207

GI number: 86609207

Start: 1831900

End: 1833117

Strand: Reverse

Name: ndh [H]

Synonym: CYB_1748

Alternate gene names: 86609207

Gene position: 1833117-1831900 (Counterclockwise)

Preceding gene: 86609208

Following gene: 86609201

Centisome position: 60.17

GC content: 62.89

Gene sequence:

>1218_bases
ATGAATCGCATTTGCATTCTTGGGGGCGGCTTTGGCGGGTTGTACACAGCTTTGGAACTGAGCCGGCAACCCTGGCCAGA
ACCACCCCAGATCACCTTGGTCGATCGGCAGGAGCGGTTCGTCTTTGCCCCCCTGCTTTATGAGCTGCTCACCGGAGAAA
TGGAAGACTGGGAGGTGGCCCCCCGTTTTCAAGATCTGCTGCCCCCGGGATCGGTGCAGTTTCGCCGCGGATCTGTCCAG
GCCATTGACCCTCAAGCCCGCCGCGTGGAGCTGGAAGATGGGCAGAGCTTGGAGTACGACGCGCTGGTGCTGGCGCTGGG
GGGAGAAACCCCTCTGGAGAGCGTTCCGGGAGCGGCGGAGTTTGCTTTTCCCTTTCGCACCCTGGCAGATGCTCAGCGGC
TGCGCGCCCACCTGAAGGCGTTGGAAGACCGGGATCCGGCTCAGCCTGTGGCTCTGGCCATTGCAGGAGCAGGGGCTAGT
GGCGTGGAATTGGCCTGCAAATTGGCGGATCGGCTGGGCTGGCGGGGACGGATCCGCCTCATCGAGTTGGGATCCCAAAT
CTTGTCCGGCTTTGCTCTCTCCAGCCGGGAGGCGGCCCAAGAGGCGCTGGCCCAACGGCGGGTGCAGGTGGAGTTGCAAA
CCAAGGTCTTGGGCATCGAGGCCCTTGGCGAGAACGGCGCCCCTCCCTTCCATCTGCAGCTGCAACGGCTGGAGACCCAG
GAGATCGCCACAGATCTTGTGGATGCTGTGCTGTGGACTGTCGGAACCCGACCGGCAGCGGTGATTGCCAATTTGGATCT
GCCCAAAACGGAGCGGGGACGGCTACAGGTTTTGTCCACCCTACAAACCCCCACCTTCCCAGAGATCTTTGCCTTGGGAG
ATGCAGCAGCGGTGGTGGATGCGGAGGGCAAGCCGGTGCCGGCCACAGCCCAAGCGGCTTTTCAACAGGCCGGTTATTGC
GCCTGGAACCTGTGGGCTTTGCTCACCCAGGAGCGGCCTCTCTTGCCCTTTCGCTACTTTTCTCTGGGGGAAATGCTCAG
CCTGGGGGTGGATACGGCGGTGCTTTCTGCCCTTGGCGGCCTCACACTGACCGGCCCCCTGGGCTATTTGGCCCGGCGAA
CTGCCTATTTGGTGCGCCTGCCCACACTGGAACACCAGCTCAAGGTGGGATGGAATTGGATCACCCGCCCCCTGTGGCAA
GGGCTGCTGGCCCGCTAG

Upstream 100 bases:

>100_bases
CCCTCGTTGCCCCTTCTGCATCAGCAGGGTGTGATTGTTAAGTCGGGGCCTTTCGCGCAACTTTGATAACGTCTGATAAC
GTCACGTGAACCATCCGAGC

Downstream 100 bases:

>100_bases
GATCCCTGTAACTGGCAAGAGCGCTCGTAGGCCGCTCGCACTGCCTGCATCAGGGCTCCCCGCACCCCCGCCTGCTCCAA
GGCTTGGATCCCGGCAATGG

Product: pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNRICILGGGFGGLYTALELSRQPWPEPPQITLVDRQERFVFAPLLYELLTGEMEDWEVAPRFQDLLPPGSVQFRRGSVQ
AIDPQARRVELEDGQSLEYDALVLALGGETPLESVPGAAEFAFPFRTLADAQRLRAHLKALEDRDPAQPVALAIAGAGAS
GVELACKLADRLGWRGRIRLIELGSQILSGFALSSREAAQEALAQRRVQVELQTKVLGIEALGENGAPPFHLQLQRLETQ
EIATDLVDAVLWTVGTRPAAVIANLDLPKTERGRLQVLSTLQTPTFPEIFALGDAAAVVDAEGKPVPATAQAAFQQAGYC
AWNLWALLTQERPLLPFRYFSLGEMLSLGVDTAVLSALGGLTLTGPLGYLARRTAYLVRLPTLEHQLKVGWNWITRPLWQ
GLLAR

Sequences:

>Translated_405_residues
MNRICILGGGFGGLYTALELSRQPWPEPPQITLVDRQERFVFAPLLYELLTGEMEDWEVAPRFQDLLPPGSVQFRRGSVQ
AIDPQARRVELEDGQSLEYDALVLALGGETPLESVPGAAEFAFPFRTLADAQRLRAHLKALEDRDPAQPVALAIAGAGAS
GVELACKLADRLGWRGRIRLIELGSQILSGFALSSREAAQEALAQRRVQVELQTKVLGIEALGENGAPPFHLQLQRLETQ
EIATDLVDAVLWTVGTRPAAVIANLDLPKTERGRLQVLSTLQTPTFPEIFALGDAAAVVDAEGKPVPATAQAAFQQAGYC
AWNLWALLTQERPLLPFRYFSLGEMLSLGVDTAVLSALGGLTLTGPLGYLARRTAYLVRLPTLEHQLKVGWNWITRPLWQ
GLLAR
>Mature_405_residues
MNRICILGGGFGGLYTALELSRQPWPEPPQITLVDRQERFVFAPLLYELLTGEMEDWEVAPRFQDLLPPGSVQFRRGSVQ
AIDPQARRVELEDGQSLEYDALVLALGGETPLESVPGAAEFAFPFRTLADAQRLRAHLKALEDRDPAQPVALAIAGAGAS
GVELACKLADRLGWRGRIRLIELGSQILSGFALSSREAAQEALAQRRVQVELQTKVLGIEALGENGAPPFHLQLQRLETQ
EIATDLVDAVLWTVGTRPAAVIANLDLPKTERGRLQVLSTLQTPTFPEIFALGDAAAVVDAEGKPVPATAQAAFQQAGYC
AWNLWALLTQERPLLPFRYFSLGEMLSLGVDTAVLSALGGLTLTGPLGYLARRTAYLVRLPTLEHQLKVGWNWITRPLWQ
GLLAR

Specific function: Transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Does not couple the redox reaction to proton translocation [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cell membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1787352, Length=362, Percent_Identity=30.3867403314917, Blast_Score=120, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6323515, Length=477, Percent_Identity=23.0607966457023, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320118, Length=458, Percent_Identity=23.5807860262009, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.6.99.3 [H]

Molecular weight: Translated: 44249; Mature: 44249

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRICILGGGFGGLYTALELSRQPWPEPPQITLVDRQERFVFAPLLYELLTGEMEDWEVA
CCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEHHHHHHHHHCCCCCCCCCC
PRFQDLLPPGSVQFRRGSVQAIDPQARRVELEDGQSLEYDALVLALGGETPLESVPGAAE
CHHHHCCCCCCCEEECCCCEEECCHHHEEECCCCCCCCEEEEEEEECCCCCHHHCCCCHH
FAFPFRTLADAQRLRAHLKALEDRDPAQPVALAIAGAGASGVELACKLADRLGWRGRIRL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEH
IELGSQILSGFALSSREAAQEALAQRRVQVELQTKVLGIEALGENGAPPFHLQLQRLETQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEHEEEEEEECCCCCCCCEEEEHHHHHHH
EIATDLVDAVLWTVGTRPAAVIANLDLPKTERGRLQVLSTLQTPTFPEIFALGDAAAVVD
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCEEEEE
AEGKPVPATAQAAFQQAGYCAWNLWALLTQERPLLPFRYFSLGEMLSLGVDTAVLSALGG
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCC
LTLTGPLGYLARRTAYLVRLPTLEHQLKVGWNWITRPLWQGLLAR
CEEECHHHHHHHHHEEEEECCCHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRICILGGGFGGLYTALELSRQPWPEPPQITLVDRQERFVFAPLLYELLTGEMEDWEVA
CCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEHHHHHHHHHCCCCCCCCCC
PRFQDLLPPGSVQFRRGSVQAIDPQARRVELEDGQSLEYDALVLALGGETPLESVPGAAE
CHHHHCCCCCCCEEECCCCEEECCHHHEEECCCCCCCCEEEEEEEECCCCCHHHCCCCHH
FAFPFRTLADAQRLRAHLKALEDRDPAQPVALAIAGAGASGVELACKLADRLGWRGRIRL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEH
IELGSQILSGFALSSREAAQEALAQRRVQVELQTKVLGIEALGENGAPPFHLQLQRLETQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEHEEEEEEECCCCCCCCEEEEHHHHHHH
EIATDLVDAVLWTVGTRPAAVIANLDLPKTERGRLQVLSTLQTPTFPEIFALGDAAAVVD
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCEEEEE
AEGKPVPATAQAAFQQAGYCAWNLWALLTQERPLLPFRYFSLGEMLSLGVDTAVLSALGG
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCC
LTLTGPLGYLARRTAYLVRLPTLEHQLKVGWNWITRPLWQGLLAR
CEEECHHHHHHHHHEEEEECCCHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]