| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is mprA [H]
Identifier: 86609198
GI number: 86609198
Start: 1822506
End: 1823747
Strand: Reverse
Name: mprA [H]
Synonym: CYB_1740
Alternate gene names: 86609198
Gene position: 1823747-1822506 (Counterclockwise)
Preceding gene: 86609199
Following gene: 86609197
Centisome position: 59.86
GC content: 57.81
Gene sequence:
>1242_bases ATGTCCCGTTTTGTGTTCGGCTCGGAGGAACTTGCGCCACTGCTCAGGCAGCAAGGTTGGCGGTTTACCACTGGATATCT GCACATTCACCTCAAGGGACTGGATCCCTCTGAGGGTGCGGAACCCTGGGTGTTGACCTACTACCACGGCAGGCTGCTTT TTTCTGCCGATCAACCCCTCAACACGCAAATCCTGCTGAAACGCCTATCCCGCTTTATTCCTCGCCTCAACTTGGAATGG CCACAGCGGGCCATCTCGGTGGTGCAAGAGCGCTTGATGAAAGACCATTCCTTACCTGAGCTGCTGGAGGCTATCACGCA ATTGGGCCTGCTCAAGCCGGGGGAGCTGGAAGATGCCCTGTGGCTCAACCTGCTTACCGATTTCGACCGCTACCTATTCG AACGGGCAGGCACCTGTTACTTTGAGGTGCAGGAGCAGGTCGCCCAAGAGGCCCCCATTGGCGGGTTTGAGTTGGAGCCG CTGCTGCAAGAAGCCGCCCGGCGCCACGATCGCTGGGCAGATTTGAAGGTGGCGATCCCAACCCTGTTGGCGGTGCCGGT GGTCAATTGGGAACGGGTCAACCGCTACCGCATCACCGATGAGCAACGACAGAAGCTCCACACCCTCACCAAAGATGGCC AGTCGCTGGAAGCAATCGCCAAGAAGCTGTGCCGGGATCGGCTGGAGGTGGCCAATCTCTTTGCCTCCTGGGCGAAAAAA GGTTTGGTCAGCCTACAAACACCCCAAGAGCTGCTGCAGACCAAGCGCCACAACCCGATAACCATCTTGGCGGTGGACGA CAGCGTGGTGATGCAGGAAATCCTACGGCAGTATTTGCCCAACTATCAGGTGATTACAACGGGCAACCCCGCCGAGGTGC TTCCTTTGTTGTTTCAGCATCGGCCCCACCTGTTGTTGATGGATATCGCCATGCCGGGGATCGATGGTCTAGAGCTTTGC CGCATTGTGCGCAGCTTAGAAGAGTTTAAGTCCCTTCCCATCCTGATGGTTACCGCTCGCGATGGTCTGCTGGCCCGCAT CCGCGGCAAATGGTCGGGGGCAACCGCCTACTTGACCAAGCCCTTCAACGAAAGTCAGCTTAATGCAGAGGTGAAGCGGC TTCTGGCCCAACAGCCGCCTGCCCACAGACAAAATCCTCTGTCGGTTCAGGGAGGCAGAACAGGTCATCCTGCCCTGTTT CAGGGATCCCCCCGTTCCCTCGAGGATCAAGCCAAGGCGTAG
Upstream 100 bases:
>100_bases TAAGTGAGCTCTCTGAAGCTCTCCTTTCGACGGTTTGAGCGTGTGGCTGAGGTGAATCGCTGCTCATTTGGCCTGAAGAA GTTGGCCCGGAGAACGCTGC
Downstream 100 bases:
>100_bases TGTCCTTCTGAGTTGATCCCCGTCGCCATTGGCTTTCCTGTCAAAATCAACAAAGGTTTTATGTTAGATAAGAAGTCAAC TCAAGAGACCATAACTTGTC
Product: response regulator
Products: NA
Alternate protein names: Mycobacterial persistence regulator A [H]
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSRFVFGSEELAPLLRQQGWRFTTGYLHIHLKGLDPSEGAEPWVLTYYHGRLLFSADQPLNTQILLKRLSRFIPRLNLEW PQRAISVVQERLMKDHSLPELLEAITQLGLLKPGELEDALWLNLLTDFDRYLFERAGTCYFEVQEQVAQEAPIGGFELEP LLQEAARRHDRWADLKVAIPTLLAVPVVNWERVNRYRITDEQRQKLHTLTKDGQSLEAIAKKLCRDRLEVANLFASWAKK GLVSLQTPQELLQTKRHNPITILAVDDSVVMQEILRQYLPNYQVITTGNPAEVLPLLFQHRPHLLLMDIAMPGIDGLELC RIVRSLEEFKSLPILMVTARDGLLARIRGKWSGATAYLTKPFNESQLNAEVKRLLAQQPPAHRQNPLSVQGGRTGHPALF QGSPRSLEDQAKA
Sequences:
>Translated_413_residues MSRFVFGSEELAPLLRQQGWRFTTGYLHIHLKGLDPSEGAEPWVLTYYHGRLLFSADQPLNTQILLKRLSRFIPRLNLEW PQRAISVVQERLMKDHSLPELLEAITQLGLLKPGELEDALWLNLLTDFDRYLFERAGTCYFEVQEQVAQEAPIGGFELEP LLQEAARRHDRWADLKVAIPTLLAVPVVNWERVNRYRITDEQRQKLHTLTKDGQSLEAIAKKLCRDRLEVANLFASWAKK GLVSLQTPQELLQTKRHNPITILAVDDSVVMQEILRQYLPNYQVITTGNPAEVLPLLFQHRPHLLLMDIAMPGIDGLELC RIVRSLEEFKSLPILMVTARDGLLARIRGKWSGATAYLTKPFNESQLNAEVKRLLAQQPPAHRQNPLSVQGGRTGHPALF QGSPRSLEDQAKA >Mature_412_residues SRFVFGSEELAPLLRQQGWRFTTGYLHIHLKGLDPSEGAEPWVLTYYHGRLLFSADQPLNTQILLKRLSRFIPRLNLEWP QRAISVVQERLMKDHSLPELLEAITQLGLLKPGELEDALWLNLLTDFDRYLFERAGTCYFEVQEQVAQEAPIGGFELEPL LQEAARRHDRWADLKVAIPTLLAVPVVNWERVNRYRITDEQRQKLHTLTKDGQSLEAIAKKLCRDRLEVANLFASWAKKG LVSLQTPQELLQTKRHNPITILAVDDSVVMQEILRQYLPNYQVITTGNPAEVLPLLFQHRPHLLLMDIAMPGIDGLELCR IVRSLEEFKSLPILMVTARDGLLARIRGKWSGATAYLTKPFNESQLNAEVKRLLAQQPPAHRQNPLSVQGGRTGHPALFQ GSPRSLEDQAKA
Specific function: Member of the two-component regulatory system mprB/mprA which contributes to maintaining a balance among several systems involved in stress resistance and is required for establishment and maintenance of persistent infection in the host. Functions as a tr
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789809, Length=119, Percent_Identity=37.8151260504202, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788394, Length=155, Percent_Identity=33.5483870967742, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87082012, Length=119, Percent_Identity=35.2941176470588, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1790863, Length=118, Percent_Identity=33.0508474576271, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790299, Length=131, Percent_Identity=33.587786259542, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 47107; Mature: 46976
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFVFGSEELAPLLRQQGWRFTTGYLHIHLKGLDPSEGAEPWVLTYYHGRLLFSADQPL CCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCEEEEECCCCC NTQILLKRLSRFIPRLNLEWPQRAISVVQERLMKDHSLPELLEAITQLGLLKPGELEDAL CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHH WLNLLTDFDRYLFERAGTCYFEVQEQVAQEAPIGGFELEPLLQEAARRHDRWADLKVAIP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH TLLAVPVVNWERVNRYRITDEQRQKLHTLTKDGQSLEAIAKKLCRDRLEVANLFASWAKK HHHHHCCCCHHHCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLVSLQTPQELLQTKRHNPITILAVDDSVVMQEILRQYLPNYQVITTGNPAEVLPLLFQH CCEECCCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCC RPHLLLMDIAMPGIDGLELCRIVRSLEEFKSLPILMVTARDGLLARIRGKWSGATAYLTK CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCEEEEEC PFNESQLNAEVKRLLAQQPPAHRQNPLSVQGGRTGHPALFQGSPRSLEDQAKA CCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEECCCCCCCHHHCCC >Mature Secondary Structure SRFVFGSEELAPLLRQQGWRFTTGYLHIHLKGLDPSEGAEPWVLTYYHGRLLFSADQPL CCCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCEEEEECCCCC NTQILLKRLSRFIPRLNLEWPQRAISVVQERLMKDHSLPELLEAITQLGLLKPGELEDAL CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHH WLNLLTDFDRYLFERAGTCYFEVQEQVAQEAPIGGFELEPLLQEAARRHDRWADLKVAIP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH TLLAVPVVNWERVNRYRITDEQRQKLHTLTKDGQSLEAIAKKLCRDRLEVANLFASWAKK HHHHHCCCCHHHCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLVSLQTPQELLQTKRHNPITILAVDDSVVMQEILRQYLPNYQVITTGNPAEVLPLLFQH CCEECCCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCC RPHLLLMDIAMPGIDGLELCRIVRSLEEFKSLPILMVTARDGLLARIRGKWSGATAYLTK CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCEEEEEC PFNESQLNAEVKRLLAQQPPAHRQNPLSVQGGRTGHPALFQGSPRSLEDQAKA CCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEECCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA