| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609075
Identifier: 86609075
GI number: 86609075
Start: 1685058
End: 1685897
Strand: Direct
Name: 86609075
Synonym: CYB_1612
Alternate gene names: NA
Gene position: 1685058-1685897 (Clockwise)
Preceding gene: 86609074
Following gene: 86609082
Centisome position: 55.31
GC content: 61.07
Gene sequence:
>840_bases ATGCAATGGAAGGGTCGGGTCGCCTACTTGGCAACCATGCATCGCAAAGAGCAGGTCATCGGCCCTCTCTTGGCCGAACA TTTGGGGATCCAAGTCCAAGTAGCAACTTTTGACACCGACCAACTGGGCACCTTCTCGCGGGAGCGGCCCCGACCGGGGG ATCCCATCCACACTCTGCGCCTGAAGATTGCAAGGGCTTTGCAGGATCATCCTGAAGCTCTGGGCTTGGCCAGCGAGGGG TCCTTTGGCCCCCACCCTCAGATCCCTTGGATCCCTTGGAATCAGGAGTGGGTCATGCTCAGGGTTTTTGAACCCGGCGC GGAGCCCTTGGAGCTGGTCGGCTATGCAGAGAGCACCCAAACCAATTTCAGCCATCGCTGGGTGCAGAGCTGGGCAGAAG CGCTGGACTTTGCCCAAAGGGCGGGTTTTCCCCAGCATGCCCTGATTGCCCTCGACCGGCCAGAAAAGCCTCAGGTCATC CACAAAGGAATCCAAGATGAAGAGACCCTGAAGCAGGTGGTGGGGGAGATGCTGACTCGGCAAGGGGGCCTTCATCTGGA AACCGACATGCGGGCCATGTGCAACCCAACCCGGCTCCAGGTTATCGCAGCCGCCACCCAAAACCTAATCGCCAAGGCCC AAAGCCTGTGCCCGGCCTGCGGCACTCCCGGCTACTGGCGGATCCGCTCGATCTCTGGACTGCCCTGCGGCCAGTGTGGC GCCCCCACCCCTGTAACCAAGGCGTGGGTATATGGCTGTGCCCGCTGTTCCCATACCCACACCGAGCCTGTGGCAGAGCC CTGGGCGGATCCCGCTCAGTGTGCTTTCTGTAATCCCTAG
Upstream 100 bases:
>100_bases CTTGCCGCTCGAGGCCAGTCCCCTGGTTTGAGTAACCCCAATTGGCCTGAGCCACAAAGCTGCGGGATCCGTTTGCCAGA TCTAGGTTAAGTCTGAGTCT
Downstream 100 bases:
>100_bases CCTTGTCTTGAGCCCGACCTCAGGCTCTCCAGAGCCGGCATTGTCATCCCCGCAGAGGAGTTGTAGTCGTTTCAGGTTAG GGTGAGACACCTGGGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MQWKGRVAYLATMHRKEQVIGPLLAEHLGIQVQVATFDTDQLGTFSRERPRPGDPIHTLRLKIARALQDHPEALGLASEG SFGPHPQIPWIPWNQEWVMLRVFEPGAEPLELVGYAESTQTNFSHRWVQSWAEALDFAQRAGFPQHALIALDRPEKPQVI HKGIQDEETLKQVVGEMLTRQGGLHLETDMRAMCNPTRLQVIAAATQNLIAKAQSLCPACGTPGYWRIRSISGLPCGQCG APTPVTKAWVYGCARCSHTHTEPVAEPWADPAQCAFCNP
Sequences:
>Translated_279_residues MQWKGRVAYLATMHRKEQVIGPLLAEHLGIQVQVATFDTDQLGTFSRERPRPGDPIHTLRLKIARALQDHPEALGLASEG SFGPHPQIPWIPWNQEWVMLRVFEPGAEPLELVGYAESTQTNFSHRWVQSWAEALDFAQRAGFPQHALIALDRPEKPQVI HKGIQDEETLKQVVGEMLTRQGGLHLETDMRAMCNPTRLQVIAAATQNLIAKAQSLCPACGTPGYWRIRSISGLPCGQCG APTPVTKAWVYGCARCSHTHTEPVAEPWADPAQCAFCNP >Mature_279_residues MQWKGRVAYLATMHRKEQVIGPLLAEHLGIQVQVATFDTDQLGTFSRERPRPGDPIHTLRLKIARALQDHPEALGLASEG SFGPHPQIPWIPWNQEWVMLRVFEPGAEPLELVGYAESTQTNFSHRWVQSWAEALDFAQRAGFPQHALIALDRPEKPQVI HKGIQDEETLKQVVGEMLTRQGGLHLETDMRAMCNPTRLQVIAAATQNLIAKAQSLCPACGTPGYWRIRSISGLPCGQCG APTPVTKAWVYGCARCSHTHTEPVAEPWADPAQCAFCNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30975; Mature: 30975
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWKGRVAYLATMHRKEQVIGPLLAEHLGIQVQVATFDTDQLGTFSRERPRPGDPIHTLR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCCCCCHHHHHH LKIARALQDHPEALGLASEGSFGPHPQIPWIPWNQEWVMLRVFEPGAEPLELVGYAESTQ HHHHHHHHHCHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCHHHHEECCHHCC TNFSHRWVQSWAEALDFAQRAGFPQHALIALDRPEKPQVIHKGIQDEETLKQVVGEMLTR CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHH QGGLHLETDMRAMCNPTRLQVIAAATQNLIAKAQSLCPACGTPGYWRIRSISGLPCGQCG CCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC APTPVTKAWVYGCARCSHTHTEPVAEPWADPAQCAFCNP CCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MQWKGRVAYLATMHRKEQVIGPLLAEHLGIQVQVATFDTDQLGTFSRERPRPGDPIHTLR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCCCCCHHHHHH LKIARALQDHPEALGLASEGSFGPHPQIPWIPWNQEWVMLRVFEPGAEPLELVGYAESTQ HHHHHHHHHCHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCHHHHEECCHHCC TNFSHRWVQSWAEALDFAQRAGFPQHALIALDRPEKPQVIHKGIQDEETLKQVVGEMLTR CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHH QGGLHLETDMRAMCNPTRLQVIAAATQNLIAKAQSLCPACGTPGYWRIRSISGLPCGQCG CCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC APTPVTKAWVYGCARCSHTHTEPVAEPWADPAQCAFCNP CCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA