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The map label for this gene is yvdB [H]

Identifier: 86609074

GI number: 86609074

Start: 1683282

End: 1684988

Strand: Direct

Name: yvdB [H]

Synonym: CYB_1611

Alternate gene names: 86609074

Gene position: 1683282-1684988 (Clockwise)

Preceding gene: 86609073

Following gene: 86609075

Centisome position: 55.25

GC content: 60.57

Gene sequence:

>1707_bases
ATGCTAAGCCAAGCGAAAGAACAACAGTCCGGCAACAGGAGATTTCTGGATTGGCACCGACGTCTGAGCCCAGACAACTG
GCGCGGGGATCTGTTCGGCGGGTTGACGACGGCGATTGTTTCCTTGCCGATGGCCTTGGCCTTTGGGGTGGCTTCGGGGG
CAGGGCCGGTGGCGGGCTTGTACGGAGCAGTATGCGTGGGCTTTTTTGCGGCTCTGTTTGGGGGTACGCCCACGCTCATC
TCCGAACCCACCGGGCCGATGACTGTGATGATGACGGCGGTGGTTGCTAATGTTACAGCTCGTTACCCGGAGCAGGGGCT
GGGGCCGGCCTTCACCGTGGTGATGCTGGGGGGCTTATTTCAGATCCTGTTTGGATCCCTGAAACTGGGTAAATACATCA
CCCTCATGCCCTACAGCGTTATTTCCGGCTTTATGTCCGGGATCGGCTGGATCATGATTTTGCTGCAGATCCCGCCGCTG
CTGGGCCACGCCAGCCAGGGGGGAGTGATTGGGGCGGTGCAGAACCTGCCGACCTACCTGCTCAACCTCAAGATACCAGA
GCTGGGGCTGGGGTTGCTGACGCTTGCCATCCTTTTTGGCTATCCCAAGCCCTGGCGACGGGTGGTGCCGCCGCAGTTGG
TGGCTTTGGTGTTGGGAACGCTGGTGGCCAGCTTGTTTATGGCCGATTGGGATTTGCGGCGCATTGGCCCCATCCCCACC
GGTTTGCCGCAGTTGCAGTGGCCGCAGTTGCCCTTTGCTTCCCTGGCCAACTTGGTGCTGGATGGGGTGGTGCTGGGGAT
GCTGGGCTGCATCGATACCCTCTTAACGGCAGTCATTGCTGATAACCTCACCCGCACCCGCCACGACTCCGACCAAGAGC
TGATCGGGCAGGGGATCGCCAATATTGTCTCTGGCTTCCTGGGGGGCTTACCGGGAGCCGGCGCCACCATGGGCACAGTG
GTGAACATCCAGTCGGGCGGACGTACCCCTCTAGCCGGCATTACCCGAGCGTTAATCCTGCTGATGGTGGTGCTGTTTGC
CGCTCCCCTCACGCAAGGGATCCCAATGGCGGTGCTGGCAGGGATCGCCTTTAAGGTGGGGGTGGATATCCTCGACTGGA
GCTTCCTCAAGCGGGCCCACCGCCTTTCCCTCAAAGGGGCAGCCATCATGTACGGAGTGATGTTCATGACGGTGTTTGTG
GATCTCATCGCTGCCGTAGGGGTGGGGGTGTTTGTGGCCAACTTGCTCACCATTCAACGCCTCAGCGAGATCCACTCCGA
AGAGGTGAAAGCCATTACCGATGCCGATGATGCGGTGGATCTCACTCCCCGTGAGAGGGAATTGCTGCGCCAGGGATGCG
GGCAGGTGTTGCTGTTTTACCTGAGCGGGCCGATGATCTTCGGGGTTTCCCAAGCCATTTCCCGCCAACATCAGGCGGTG
GCCTCCTGCCAAGCGCTGGTGGTGGATCTATCAGATGTGCCGATGCTGGGAGTTTCGGCGACGCTATCCTTGGAAAATGC
CATTCGCGAGGCCCTGGATCGGGGCAAACAGGTGTGGATTGTTGGGGCCAAGGGCCGGATCCGGCAGCGCCTGGAAAACC
TACATTTGCCGCTGCCCCCAGAGCGGTTTGTGGACAGCCGTGAGGTGGCTTTGGCCGAGGCTGTTGCCCAGTTGGGCTTG
CCGCTCGAGGCCAGTCCCCTGGTTTGA

Upstream 100 bases:

>100_bases
GAATCCTTGAGGGAAACTATAGAAGAAAATCTATTCTCTAGCATGATCTCTATAGTAACGTTCAATGATAGGCTGCCCAT
AGCGTGGAGGGCTTTGGGGC

Downstream 100 bases:

>100_bases
GTAACCCCAATTGGCCTGAGCCACAAAGCTGCGGGATCCGTTTGCCAGATCTAGGTTAAGTCTGAGTCTATGCAATGGAA
GGGTCGGGTCGCCTACTTGG

Product: SulP family sulfate permease

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MLSQAKEQQSGNRRFLDWHRRLSPDNWRGDLFGGLTTAIVSLPMALAFGVASGAGPVAGLYGAVCVGFFAALFGGTPTLI
SEPTGPMTVMMTAVVANVTARYPEQGLGPAFTVVMLGGLFQILFGSLKLGKYITLMPYSVISGFMSGIGWIMILLQIPPL
LGHASQGGVIGAVQNLPTYLLNLKIPELGLGLLTLAILFGYPKPWRRVVPPQLVALVLGTLVASLFMADWDLRRIGPIPT
GLPQLQWPQLPFASLANLVLDGVVLGMLGCIDTLLTAVIADNLTRTRHDSDQELIGQGIANIVSGFLGGLPGAGATMGTV
VNIQSGGRTPLAGITRALILLMVVLFAAPLTQGIPMAVLAGIAFKVGVDILDWSFLKRAHRLSLKGAAIMYGVMFMTVFV
DLIAAVGVGVFVANLLTIQRLSEIHSEEVKAITDADDAVDLTPRERELLRQGCGQVLLFYLSGPMIFGVSQAISRQHQAV
ASCQALVVDLSDVPMLGVSATLSLENAIREALDRGKQVWIVGAKGRIRQRLENLHLPLPPERFVDSREVALAEAVAQLGL
PLEASPLV

Sequences:

>Translated_568_residues
MLSQAKEQQSGNRRFLDWHRRLSPDNWRGDLFGGLTTAIVSLPMALAFGVASGAGPVAGLYGAVCVGFFAALFGGTPTLI
SEPTGPMTVMMTAVVANVTARYPEQGLGPAFTVVMLGGLFQILFGSLKLGKYITLMPYSVISGFMSGIGWIMILLQIPPL
LGHASQGGVIGAVQNLPTYLLNLKIPELGLGLLTLAILFGYPKPWRRVVPPQLVALVLGTLVASLFMADWDLRRIGPIPT
GLPQLQWPQLPFASLANLVLDGVVLGMLGCIDTLLTAVIADNLTRTRHDSDQELIGQGIANIVSGFLGGLPGAGATMGTV
VNIQSGGRTPLAGITRALILLMVVLFAAPLTQGIPMAVLAGIAFKVGVDILDWSFLKRAHRLSLKGAAIMYGVMFMTVFV
DLIAAVGVGVFVANLLTIQRLSEIHSEEVKAITDADDAVDLTPRERELLRQGCGQVLLFYLSGPMIFGVSQAISRQHQAV
ASCQALVVDLSDVPMLGVSATLSLENAIREALDRGKQVWIVGAKGRIRQRLENLHLPLPPERFVDSREVALAEAVAQLGL
PLEASPLV
>Mature_568_residues
MLSQAKEQQSGNRRFLDWHRRLSPDNWRGDLFGGLTTAIVSLPMALAFGVASGAGPVAGLYGAVCVGFFAALFGGTPTLI
SEPTGPMTVMMTAVVANVTARYPEQGLGPAFTVVMLGGLFQILFGSLKLGKYITLMPYSVISGFMSGIGWIMILLQIPPL
LGHASQGGVIGAVQNLPTYLLNLKIPELGLGLLTLAILFGYPKPWRRVVPPQLVALVLGTLVASLFMADWDLRRIGPIPT
GLPQLQWPQLPFASLANLVLDGVVLGMLGCIDTLLTAVIADNLTRTRHDSDQELIGQGIANIVSGFLGGLPGAGATMGTV
VNIQSGGRTPLAGITRALILLMVVLFAAPLTQGIPMAVLAGIAFKVGVDILDWSFLKRAHRLSLKGAAIMYGVMFMTVFV
DLIAAVGVGVFVANLLTIQRLSEIHSEEVKAITDADDAVDLTPRERELLRQGCGQVLLFYLSGPMIFGVSQAISRQHQAV
ASCQALVVDLSDVPMLGVSATLSLENAIREALDRGKQVWIVGAKGRIRQRLENLHLPLPPERFVDSREVALAEAVAQLGL
PLEASPLV

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI45827802, Length=444, Percent_Identity=24.5495495495495, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI39752683, Length=489, Percent_Identity=23.5173824130879, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI20336282, Length=549, Percent_Identity=24.0437158469945, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI16306483, Length=549, Percent_Identity=24.0437158469945, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI45827800, Length=489, Percent_Identity=23.5173824130879, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI269784651, Length=368, Percent_Identity=24.7282608695652, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI262206105, Length=445, Percent_Identity=25.6179775280899, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI262206075, Length=445, Percent_Identity=25.6179775280899, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI262206069, Length=445, Percent_Identity=25.6179775280899, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI262206063, Length=445, Percent_Identity=25.6179775280899, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI4557535, Length=374, Percent_Identity=25.1336898395722, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI4505697, Length=395, Percent_Identity=23.2911392405063, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI94721257, Length=446, Percent_Identity=24.2152466367713, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI94721259, Length=446, Percent_Identity=24.2152466367713, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI94721253, Length=441, Percent_Identity=24.2630385487528, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI94721255, Length=441, Percent_Identity=24.2630385487528, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI87081859, Length=451, Percent_Identity=28.8248337028825, Blast_Score=148, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI86564196, Length=500, Percent_Identity=24, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI86565215, Length=458, Percent_Identity=24.0174672489083, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17566848, Length=584, Percent_Identity=23.458904109589, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI86564876, Length=532, Percent_Identity=24.2481203007519, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17551690, Length=428, Percent_Identity=21.7289719626168, Blast_Score=91, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319771, Length=431, Percent_Identity=22.5058004640371, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6323121, Length=449, Percent_Identity=22.0489977728285, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24649801, Length=466, Percent_Identity=26.1802575107296, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19922482, Length=503, Percent_Identity=23.0616302186879, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21355087, Length=410, Percent_Identity=21.7073170731707, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI85815873, Length=378, Percent_Identity=25.9259259259259, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24647160, Length=417, Percent_Identity=21.5827338129496, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24666186, Length=423, Percent_Identity=22.9314420803783, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24663084, Length=553, Percent_Identity=23.1464737793852, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21357695, Length=553, Percent_Identity=23.1464737793852, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21358229, Length=605, Percent_Identity=22.8099173553719, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21358633, Length=449, Percent_Identity=22.4944320712695, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 60395; Mature: 60395

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLSQAKEQQSGNRRFLDWHRRLSPDNWRGDLFGGLTTAIVSLPMALAFGVASGAGPVAGL
CCCCCHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
YGAVCVGFFAALFGGTPTLISEPTGPMTVMMTAVVANVTARYPEQGLGPAFTVVMLGGLF
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QILFGSLKLGKYITLMPYSVISGFMSGIGWIMILLQIPPLLGHASQGGVIGAVQNLPTYL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHH
LNLKIPELGLGLLTLAILFGYPKPWRRVVPPQLVALVLGTLVASLFMADWDLRRIGPIPT
HCCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
GLPQLQWPQLPFASLANLVLDGVVLGMLGCIDTLLTAVIADNLTRTRHDSDQELIGQGIA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NIVSGFLGGLPGAGATMGTVVNIQSGGRTPLAGITRALILLMVVLFAAPLTQGIPMAVLA
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GIAFKVGVDILDWSFLKRAHRLSLKGAAIMYGVMFMTVFVDLIAAVGVGVFVANLLTIQR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEIHSEEVKAITDADDAVDLTPRERELLRQGCGQVLLFYLSGPMIFGVSQAISRQHQAV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ASCQALVVDLSDVPMLGVSATLSLENAIREALDRGKQVWIVGAKGRIRQRLENLHLPLPP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCH
ERFVDSREVALAEAVAQLGLPLEASPLV
HHHCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]