Click here to switch to the map view.

The map label for this gene is paaE [C]

Identifier: 86609062

GI number: 86609062

Start: 1672893

End: 1673192

Strand: Direct

Name: paaE [C]

Synonym: CYB_1598

Alternate gene names: 86609062

Gene position: 1672893-1673192 (Clockwise)

Preceding gene: 86609058

Following gene: 86609063

Centisome position: 54.91

GC content: 55.67

Gene sequence:

>300_bases
ATGGCTACCTATAAGGTCACTCTGATCAACGAGGAGCAAGGCTTGAACGTCACCATCGATGTGCCGGACGATGAGTACAT
TTTGGACGTGGCGGAAGAGCAAGGGATCGAGCTGCCCTATTCCTGCCGCGCCGGTGCCTGTTCGACCTGTGCCGGCAAGC
TGGTGAGCGGCACAGTGGATCAAAGCGATCAGTCCTTCCTGGACGATGATCAGATCGAGCAGGGCTATGTGCTGACCTGT
GTGGCTTACCCTACTTCCGACTGCACCATCATCACCCACCAAGAAGAAGCCCTTTACTGA

Upstream 100 bases:

>100_bases
AACCGGAAGATTTGCCTATTTCCTCACAAAAGGGTGCTTGATCTGGGGCAGAAGGGTGGCAGGATGAGGAGTGGATGTTT
TTTCTGGAGACCCAACCAGG

Downstream 100 bases:

>100_bases
TCGAGCTTGAATTTCCGTCCTCAACCCCAGCCCCTCTTCCAAAGAGAGAGGGGTTTTTGTTTTGGGTGGCCCAAGGGGGT
GTTCGAGCGCTCCGCGCTGC

Product: ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MATYKVTLINEEQGLNVTIDVPDDEYILDVAEEQGIELPYSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEQGYVLTC
VAYPTSDCTIITHQEEALY

Sequences:

>Translated_99_residues
MATYKVTLINEEQGLNVTIDVPDDEYILDVAEEQGIELPYSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEQGYVLTC
VAYPTSDCTIITHQEEALY
>Mature_98_residues
ATYKVTLINEEQGLNVTIDVPDDEYILDVAEEQGIELPYSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEQGYVLTCV
AYPTSDCTIITHQEEALY

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=87, Percent_Identity=40.2298850574713, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 10833; Mature: 10702

Theoretical pI: Translated: 3.49; Mature: 3.49

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYKVTLINEEQGLNVTIDVPDDEYILDVAEEQGIELPYSCRAGACSTCAGKLVSGTVD
CCEEEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC
QSDQSFLDDDQIEQGYVLTCVAYPTSDCTIITHQEEALY
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCC
>Mature Secondary Structure 
ATYKVTLINEEQGLNVTIDVPDDEYILDVAEEQGIELPYSCRAGACSTCAGKLVSGTVD
CEEEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC
QSDQSFLDDDQIEQGYVLTCVAYPTSDCTIITHQEEALY
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6418732 [H]