Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609053

Identifier: 86609053

GI number: 86609053

Start: 1660376

End: 1660687

Strand: Direct

Name: 86609053

Synonym: CYB_1588

Alternate gene names: NA

Gene position: 1660376-1660687 (Clockwise)

Preceding gene: 86609052

Following gene: 86609054

Centisome position: 54.5

GC content: 56.09

Gene sequence:

>312_bases
ATGGCCCTGAATCCAAAGAGGATCCGCCGCATCCACCGCACCCTTGCCCCCATCCTGGCCTTGCCTTTGGTGGTAACGGT
GCTAACGGGATCCCTGTATCAAATTGCCCGCCTCAACCAAAACTTCGACTACTACTGGCTGATCCAAATCCACAAAGGGC
AGTGGGGCCCCCTCGATCTGCAAGCGGTTTACCCCTTCTTAAACGGACTGGGGCTGCTGGTGATGGTGGCCACCGGTCTC
AGTATGTGGTTACCCACAAAACTCCATCGCCGCCCCAAACATACGGAGTCCCAGAGGGTTTTGGATGGATAA

Upstream 100 bases:

>100_bases
CACGTGGAGGAGCTGTCCAGGAGCCGTTCTTGAGCGAGAATAGGGGCTAGCTGCCCTGATAGCATGGCAGGGATCGCCCC
ATTGCCCTGGAGAAAGCTCA

Downstream 100 bases:

>100_bases
ACCTGTAGGGTAAACACCTAAGAAACATTCCAGAAAACCCTACACTTCTCGGAATAGATTTGAATACACTAGAAGCATAG
AGGTTTTGCTTATACCTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MALNPKRIRRIHRTLAPILALPLVVTVLTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDLQAVYPFLNGLGLLVMVATGL
SMWLPTKLHRRPKHTESQRVLDG

Sequences:

>Translated_103_residues
MALNPKRIRRIHRTLAPILALPLVVTVLTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDLQAVYPFLNGLGLLVMVATGL
SMWLPTKLHRRPKHTESQRVLDG
>Mature_102_residues
ALNPKRIRRIHRTLAPILALPLVVTVLTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDLQAVYPFLNGLGLLVMVATGLS
MWLPTKLHRRPKHTESQRVLDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11824; Mature: 11693

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNPKRIRRIHRTLAPILALPLVVTVLTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCCHH
QAVYPFLNGLGLLVMVATGLSMWLPTKLHRRPKHTESQRVLDG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALNPKRIRRIHRTLAPILALPLVVTVLTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCCHH
QAVYPFLNGLGLLVMVATGLSMWLPTKLHRRPKHTESQRVLDG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA