Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609039

Identifier: 86609039

GI number: 86609039

Start: 1647491

End: 1647931

Strand: Direct

Name: 86609039

Synonym: CYB_1574

Alternate gene names: NA

Gene position: 1647491-1647931 (Clockwise)

Preceding gene: 86609038

Following gene: 86609042

Centisome position: 54.07

GC content: 64.85

Gene sequence:

>441_bases
GTGCGGGGCAGCCGCCGTGGCTGGGAATGGCGTTGGGGATCCCTGCGCCTTCGCGGCCGTTGGCCGGCGCAGCGGGGAGA
ACGTTGCTCCCCCAGAGATTGGCCCTACCTGTGGAAGCTGGGCAAGCAGCTCCACATCCAATCTTGGCAAGGAGGGGTGG
AAATTGGCTTTGCCGATCCGGCTTTGACGGGGCAATGCTTGGGACTAATCGCCGCTCTACCCCCTCAGTTGGCCCAACAC
CTGCGCTTGACCTTCGCTCGCATCGGTTGGCACGGATGGGGATCCCTGGTGATCCGGTTGCGCGGCTGGCAGGTGCTGGG
GCTGGCCTTGAAACTGGGGTGGCTCGCCCTATCGCGCCATCGGAAGGGATCCCCAGCAAAAATAGCCCATGGGACAGCTG
GCGTCAGGAGCAAAGCGCTGGGGGGGGAACTGCAGCGCTGA

Upstream 100 bases:

>100_bases
TCTCTTGTTCTGGCCTCAACAGCTCATTCTGCGCTACCGCAAACCCTGGCAGGGCCCCCTTGCCTGGATCTGGAAATGGC
ACGGCTGGGGAGGCTGGGCC

Downstream 100 bases:

>100_bases
CGCGGTCAGGCCGGCTGCAGCGCCGGGCAGCAATTCAACAGAGGCATGACCTACCCGCCTCCCCCTTCGCCCTGGCCGTT
GGTAGGGGTGGGGGCAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADPALTGQCLGLIAALPPQLAQH
LRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRHRKGSPAKIAHGTAGVRSKALGGELQR

Sequences:

>Translated_146_residues
MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADPALTGQCLGLIAALPPQLAQH
LRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRHRKGSPAKIAHGTAGVRSKALGGELQR
>Mature_146_residues
MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADPALTGQCLGLIAALPPQLAQH
LRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRHRKGSPAKIAHGTAGVRSKALGGELQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16451; Mature: 16451

Theoretical pI: Translated: 12.42; Mature: 12.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADP
CCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCEEEECCCC
ALTGQCLGLIAALPPQLAQHLRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRH
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC
RKGSPAKIAHGTAGVRSKALGGELQR
CCCCCCEEECCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRGSRRGWEWRWGSLRLRGRWPAQRGERCSPRDWPYLWKLGKQLHIQSWQGGVEIGFADP
CCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCEEEECCCC
ALTGQCLGLIAALPPQLAQHLRLTFARIGWHGWGSLVIRLRGWQVLGLALKLGWLALSRH
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC
RKGSPAKIAHGTAGVRSKALGGELQR
CCCCCCEEECCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA