| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is gufA [H]
Identifier: 86609030
GI number: 86609030
Start: 1638083
End: 1638856
Strand: Reverse
Name: gufA [H]
Synonym: CYB_1565
Alternate gene names: 86609030
Gene position: 1638856-1638083 (Counterclockwise)
Preceding gene: 86609031
Following gene: 86609029
Centisome position: 53.79
GC content: 61.24
Gene sequence:
>774_bases GTGCATCCAATCGCGATGGGATCCCTGGCTAGCTTTATCGCCGGCTTGGCGACGGGGCTGGGGGCTTTGCCGGCCCTTTT TCTTCCCTCGCTCTCCGAAAGGGTACAAGGGATCCTGCTGGGGTTTGGGGGTGGGGTGATGTTGGCGGCCACCTCTTTTT CCCTGCTGGTGCCGGGCACCGAGGCAGCCATGGCGCTGGGGTATTCCCCATTTGGGGCGGCTGTGGTGATGGTGGCAGGC CTGTTGTTGGGGGCGATCTTCCTGGAGAGTGCCCACCGCTTTTTTCCCCACGAGCACTTTTTCAAAGGGGTTGAAGGGGA GAACCGCGCCCATTTGAAGCGGATTTGGCTGTTCATCATTGCCATTGCCCTGCACAATTTCCCGGAAGGACTGGCGGTGG GAGTGGGTTTCGCTACCGGCCAAGTCGGCGATGGGTTGGCGTTGGCGTTGGGGATCGGCTTGCAGAACATGCCAGAAGGG CTGGTGGTGGCTTTGTCACTGGTGGGCCAGGGGTACTCGCGGCTGTTCGCTTTTGGCATCGCCCTGCTGACCGGACTGGT GGAGCCCATCGGCGGGATCCTGGGAGCAACGGTGGTCTCTCTGGCGCAGCCCCTACTACCCTGGGGCATGGCTTTTGCGG CGGGGGCGATGTTGTTTGTCATTTCCGATGAGATCATCCCTGAGTCGCACCGGCAGGGGTTGGAGCGGGAGGGCACCTTT GGGGTCATCAGTGGGTTTGTGGTGATGATGTTGCTGGATATCACCTTGGGCTAG
Upstream 100 bases:
>100_bases CTTTCAGAACCTCGCCTATGCCGCTCGAGCCAGCAATGTTCACACAACGTTGGAAAGGGAGGAGAATTGAAAAGCATTCG GCCTTTGTGGAGATTGGCTT
Downstream 100 bases:
>100_bases CAAGGGATCCCGTCGCGAAGTGGAACGGAGTTTTATTTTTTATGTTGAGTAACGAACCCTTTTTGTGGCGAGGAGCAGGG GAACACGCCTGTCTGCTGCT
Product: zinc/iron ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MHPIAMGSLASFIAGLATGLGALPALFLPSLSERVQGILLGFGGGVMLAATSFSLLVPGTEAAMALGYSPFGAAVVMVAG LLLGAIFLESAHRFFPHEHFFKGVEGENRAHLKRIWLFIIAIALHNFPEGLAVGVGFATGQVGDGLALALGIGLQNMPEG LVVALSLVGQGYSRLFAFGIALLTGLVEPIGGILGATVVSLAQPLLPWGMAFAAGAMLFVISDEIIPESHRQGLEREGTF GVISGFVVMMLLDITLG
Sequences:
>Translated_257_residues MHPIAMGSLASFIAGLATGLGALPALFLPSLSERVQGILLGFGGGVMLAATSFSLLVPGTEAAMALGYSPFGAAVVMVAG LLLGAIFLESAHRFFPHEHFFKGVEGENRAHLKRIWLFIIAIALHNFPEGLAVGVGFATGQVGDGLALALGIGLQNMPEG LVVALSLVGQGYSRLFAFGIALLTGLVEPIGGILGATVVSLAQPLLPWGMAFAAGAMLFVISDEIIPESHRQGLEREGTF GVISGFVVMMLLDITLG >Mature_257_residues MHPIAMGSLASFIAGLATGLGALPALFLPSLSERVQGILLGFGGGVMLAATSFSLLVPGTEAAMALGYSPFGAAVVMVAG LLLGAIFLESAHRFFPHEHFFKGVEGENRAHLKRIWLFIIAIALHNFPEGLAVGVGFATGQVGDGLALALGIGLQNMPEG LVVALSLVGQGYSRLFAFGIALLTGLVEPIGGILGATVVSLAQPLLPWGMAFAAGAMLFVISDEIIPESHRQGLEREGTF GVISGFVVMMLLDITLG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=324, Percent_Identity=35.8024691358025, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI229577422, Length=154, Percent_Identity=50, Blast_Score=140, Evalue=1e-33, Organism=Escherichia coli, GI1789419, Length=245, Percent_Identity=30.6122448979592, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17507805, Length=318, Percent_Identity=35.5345911949685, Blast_Score=154, Evalue=5e-38, Organism=Drosophila melanogaster, GI24652846, Length=163, Percent_Identity=46.0122699386503, Blast_Score=136, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 26509; Mature: 26509
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPIAMGSLASFIAGLATGLGALPALFLPSLSERVQGILLGFGGGVMLAATSFSLLVPGT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHEEECCC EAAMALGYSPFGAAVVMVAGLLLGAIFLESAHRFFPHEHFFKGVEGENRAHLKRIWLFII HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHH AIALHNFPEGLAVGVGFATGQVGDGLALALGIGLQNMPEGLVVALSLVGQGYSRLFAFGI HHHHHCCCCHHEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHH ALLTGLVEPIGGILGATVVSLAQPLLPWGMAFAAGAMLFVISDEIIPESHRQGLEREGTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCH GVISGFVVMMLLDITLG HHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPIAMGSLASFIAGLATGLGALPALFLPSLSERVQGILLGFGGGVMLAATSFSLLVPGT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHEEECCC EAAMALGYSPFGAAVVMVAGLLLGAIFLESAHRFFPHEHFFKGVEGENRAHLKRIWLFII HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHH AIALHNFPEGLAVGVGFATGQVGDGLALALGIGLQNMPEGLVVALSLVGQGYSRLFAFGI HHHHHCCCCHHEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHH ALLTGLVEPIGGILGATVVSLAQPLLPWGMAFAAGAMLFVISDEIIPESHRQGLEREGTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCH GVISGFVVMMLLDITLG HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]