Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is est [H]

Identifier: 86609029

GI number: 86609029

Start: 1637235

End: 1638041

Strand: Reverse

Name: est [H]

Synonym: CYB_1563

Alternate gene names: 86609029

Gene position: 1638041-1637235 (Counterclockwise)

Preceding gene: 86609030

Following gene: 86609027

Centisome position: 53.76

GC content: 59.11

Gene sequence:

>807_bases
ATGTTGAGTAACGAACCCTTTTTGTGGCGAGGAGCAGGGGAACACGCCTGTCTGCTGCTACATGGATTGGGGGGCGGTGT
TTACGAGTTGCAATGGCTGGCAGAGCGGCTGTTGGCGGCTGGCCTGACGGTGCAGGGATTTAACTATCCCGGCCATGACA
GTGCTCCGCATCGCTTACACGACCGCCGGTCTGCCCACATGCCCCCTTCCCGCTGGACGGAGTGGTACGGGCGGGCTTTG
GAGCATTATCTGGCTTTGCAGCAGGAGTACCCGCGCGTTTCCTTGGTGGGCTTTTCCACCGGCTGTCTGCTGGCTTTGCA
CCTGGCTTTTGCCCATCCCATCCATAAATTGGTGCTGCTGGCGCCATTTTTCGCCATTCGCCACCGCTGGTACTATCTTT
TTCGCCCTGAGCAGTACCTGAACAGCCTGGGTTGGCTATTGAAGGAGGTGCCCCGCCTCAGCTTGCCGATTCGGGATGGG
GACGCTCGAGCCTTGGCAGAAAGAACGGCCTATTTCCGCAGCTTTAATCTGTCGGCGGTGCGCAGCGCTCTGGAGCTGAT
CGAGCGGGTCAAGGGGGAAGTGGCCAGCATCCGGGTTCCCACCCTGATCCTGCAATCCCGCCAAGATATGGTGGTGGACC
CCGACCAGGCAATGTGGCTCTATCAAGAGCTGGGATCCGAGGAGAAGATCTTGTCTTGGCTGGAGCACTCCGACCACATC
CTCACTTTGGACTGCGAGCGGGAAACGGTGTTTGACCAGGTTTGCGCCTTCCTCAACCAGGATCCTTCTGCGCCCGGATC
AGCGTAA

Upstream 100 bases:

>100_bases
CCTTTGGGGTCATCAGTGGGTTTGTGGTGATGATGTTGCTGGATATCACCTTGGGCTAGCAAGGGATCCCGTCGCGAAGT
GGAACGGAGTTTTATTTTTT

Downstream 100 bases:

>100_bases
CCCGCTGCCAAGCACCGCGGGCATCGTAGTCTCGGCTCAAACGCAAGAGACAGTGGCAGTCTTCCGGCTGCGGAAACCAG
CTCAGGCTTACCGAAAAGCT

Product: carboxylesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLHDRRSAHMPPSRWTEWYGRAL
EHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLLAPFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDG
DARALAERTAYFRSFNLSAVRSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI
LTLDCERETVFDQVCAFLNQDPSAPGSA

Sequences:

>Translated_268_residues
MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLHDRRSAHMPPSRWTEWYGRAL
EHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLLAPFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDG
DARALAERTAYFRSFNLSAVRSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI
LTLDCERETVFDQVCAFLNQDPSAPGSA
>Mature_268_residues
MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLHDRRSAHMPPSRWTEWYGRAL
EHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLLAPFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDG
DARALAERTAYFRSFNLSAVRSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI
LTLDCERETVFDQVCAFLNQDPSAPGSA

Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]

COG id: COG1647

COG function: function code R; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012354
- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: =3.1.1.1 [H]

Molecular weight: Translated: 30608; Mature: 30608

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLH
CCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHH
DRRSAHMPPSRWTEWYGRALEHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
APFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDGDARALAERTAYFRSFNLSAV
HHHHHHHHCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
RSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI
HHHHHHHHHHCCHHHHEEHHHHHHHCCCCCEECCHHHHHHHHHHCCHHHHHHHHHCCCCE
LTLDCERETVFDQVCAFLNQDPSAPGSA
EEEECCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLH
CCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHH
DRRSAHMPPSRWTEWYGRALEHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
APFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDGDARALAERTAYFRSFNLSAV
HHHHHHHHCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
RSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI
HHHHHHHHHHCCHHHHEEHHHHHHHCCCCCEECCHHHHHHHHHHCCHHHHHHHHHCCCCE
LTLDCERETVFDQVCAFLNQDPSAPGSA
EEEECCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1369099 [H]