| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is est [H]
Identifier: 86609029
GI number: 86609029
Start: 1637235
End: 1638041
Strand: Reverse
Name: est [H]
Synonym: CYB_1563
Alternate gene names: 86609029
Gene position: 1638041-1637235 (Counterclockwise)
Preceding gene: 86609030
Following gene: 86609027
Centisome position: 53.76
GC content: 59.11
Gene sequence:
>807_bases ATGTTGAGTAACGAACCCTTTTTGTGGCGAGGAGCAGGGGAACACGCCTGTCTGCTGCTACATGGATTGGGGGGCGGTGT TTACGAGTTGCAATGGCTGGCAGAGCGGCTGTTGGCGGCTGGCCTGACGGTGCAGGGATTTAACTATCCCGGCCATGACA GTGCTCCGCATCGCTTACACGACCGCCGGTCTGCCCACATGCCCCCTTCCCGCTGGACGGAGTGGTACGGGCGGGCTTTG GAGCATTATCTGGCTTTGCAGCAGGAGTACCCGCGCGTTTCCTTGGTGGGCTTTTCCACCGGCTGTCTGCTGGCTTTGCA CCTGGCTTTTGCCCATCCCATCCATAAATTGGTGCTGCTGGCGCCATTTTTCGCCATTCGCCACCGCTGGTACTATCTTT TTCGCCCTGAGCAGTACCTGAACAGCCTGGGTTGGCTATTGAAGGAGGTGCCCCGCCTCAGCTTGCCGATTCGGGATGGG GACGCTCGAGCCTTGGCAGAAAGAACGGCCTATTTCCGCAGCTTTAATCTGTCGGCGGTGCGCAGCGCTCTGGAGCTGAT CGAGCGGGTCAAGGGGGAAGTGGCCAGCATCCGGGTTCCCACCCTGATCCTGCAATCCCGCCAAGATATGGTGGTGGACC CCGACCAGGCAATGTGGCTCTATCAAGAGCTGGGATCCGAGGAGAAGATCTTGTCTTGGCTGGAGCACTCCGACCACATC CTCACTTTGGACTGCGAGCGGGAAACGGTGTTTGACCAGGTTTGCGCCTTCCTCAACCAGGATCCTTCTGCGCCCGGATC AGCGTAA
Upstream 100 bases:
>100_bases CCTTTGGGGTCATCAGTGGGTTTGTGGTGATGATGTTGCTGGATATCACCTTGGGCTAGCAAGGGATCCCGTCGCGAAGT GGAACGGAGTTTTATTTTTT
Downstream 100 bases:
>100_bases CCCGCTGCCAAGCACCGCGGGCATCGTAGTCTCGGCTCAAACGCAAGAGACAGTGGCAGTCTTCCGGCTGCGGAAACCAG CTCAGGCTTACCGAAAAGCT
Product: carboxylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLHDRRSAHMPPSRWTEWYGRAL EHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLLAPFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDG DARALAERTAYFRSFNLSAVRSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI LTLDCERETVFDQVCAFLNQDPSAPGSA
Sequences:
>Translated_268_residues MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLHDRRSAHMPPSRWTEWYGRAL EHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLLAPFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDG DARALAERTAYFRSFNLSAVRSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI LTLDCERETVFDQVCAFLNQDPSAPGSA >Mature_268_residues MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLHDRRSAHMPPSRWTEWYGRAL EHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLLAPFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDG DARALAERTAYFRSFNLSAVRSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI LTLDCERETVFDQVCAFLNQDPSAPGSA
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 30608; Mature: 30608
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLH CCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHH DRRSAHMPPSRWTEWYGRALEHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLL HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH APFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDGDARALAERTAYFRSFNLSAV HHHHHHHHCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH RSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI HHHHHHHHHHCCHHHHEEHHHHHHHCCCCCEECCHHHHHHHHHHCCHHHHHHHHHCCCCE LTLDCERETVFDQVCAFLNQDPSAPGSA EEEECCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLSNEPFLWRGAGEHACLLLHGLGGGVYELQWLAERLLAAGLTVQGFNYPGHDSAPHRLH CCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHH DRRSAHMPPSRWTEWYGRALEHYLALQQEYPRVSLVGFSTGCLLALHLAFAHPIHKLVLL HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH APFFAIRHRWYYLFRPEQYLNSLGWLLKEVPRLSLPIRDGDARALAERTAYFRSFNLSAV HHHHHHHHCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH RSALELIERVKGEVASIRVPTLILQSRQDMVVDPDQAMWLYQELGSEEKILSWLEHSDHI HHHHHHHHHHCCHHHHEEHHHHHHHCCCCCEECCHHHHHHHHHHCCHHHHHHHHHCCCCE LTLDCERETVFDQVCAFLNQDPSAPGSA EEEECCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]