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The map label for this gene is yjcR [C]

Identifier: 86609023

GI number: 86609023

Start: 1631827

End: 1632849

Strand: Reverse

Name: yjcR [C]

Synonym: CYB_1558

Alternate gene names: 86609023

Gene position: 1632849-1631827 (Counterclockwise)

Preceding gene: 86609027

Following gene: 86609022

Centisome position: 53.59

GC content: 64.61

Gene sequence:

>1023_bases
ATGCGGCTGCCTCCGCAAGTTGGTGCTTTGGGTCGCCTGGAGCCGGAGGGGGAAGTGCTGCGCATTGCCGGTTCCCCCGG
AGAACGGCTGGGAGAGCTGCTGGTGGCCGAGGGGGATCGCGTGGTGGCAGGCCAAGTGCTAGCCCGCTTGGAAAGCTACG
CCGAGCGGTTGGCGGAGCGAGAGTACGCTGCCGCCCAACTTCAAGAGGCCCGCGCCCGGTTGCAGGCCGAGACCCGTTTC
AGTCAGGCCCAAATCCAAGAGGCACGCACCCGCCTCAGCCGTCTGGACGAGCCGCAACAGATGCAAATCCGCTCCCAGGA
AGCGGTGGTGGAACGTATCCGGGCAGAACTGGCCGATGCCGAGGCCAATCTGGCCCGCTTTCAGGAGCTCTGGCAGGAAG
GAGCAATCTCGCAACAAGAGCTGGATCAACGCCGGCTGCTGGTGCGGCAACGACAGGAGGACTTGCGGGCTGCCGAAGCC
ACCCTGAGCCAACTGCGCCTGGCCCGTGAGCGCGATCTGCTCAATGCCCAAGCCCAAGTCCAAGCTGCCGAGGCGGGACT
GAGTCTGGCCCAAGCCCAAGTCCAACTGGGATCCCTGGCCCGCAATCTGGAACTGGCAGAAGCTCGCCTAGAGCGCACCC
TCATCCGCGCTCCCCGTGCTGGACAGGTGCTCAAGATCCACACCCGCCCTGGAGAGGTCATCCCCGCCGGCGAGGGCATT
CTCGAGCTGGGCAACACTGACCAAATGATGGTGGTGGCCGAGGTCTACGAAACAGACATCTTGCGGGTTCGGCCAGGCCA
GCAGGCCACCATTAGCAACCGCGCTCTGCCAGAAACCCTGCAGGGCCGAGTGGAGCGGGTAGGCCTGCAGATTGGCAAGA
AAGATGTGCTCAACACCGACCCAGCTGCCGATGTGGATGCCCGCGTGGTGGAAGTGTATATCCGCCTGGATCCGGAGAGC
AGCGCCCGCGTGGCTGGCCTGACCAACCTGCAGGTGAATGTGGCCATCGATGTCGAGGGGTAG

Upstream 100 bases:

>100_bases
AGGAGTCGGGCTGCTTGGTTGTGCCGGTCTGGCATGGCTGGGATTGAGCAAACAGGGAGCCACACAGTCGGTATCGGGAA
GTGCAGAGGCAACGGTGGAA

Downstream 100 bases:

>100_bases
GCTCAGCCCATGTACAGCCTGTTCAGTGTGGCTTTTATCGCCCATCGGATCCCGTTGGCCTGGCTGCAGTTGACGCGGGA
GAAGATCCGCCTGCTGGTGG

Product: membrane fusion protein family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRLPPQVGALGRLEPEGEVLRIAGSPGERLGELLVAEGDRVVAGQVLARLESYAERLAEREYAAAQLQEARARLQAETRF
SQAQIQEARTRLSRLDEPQQMQIRSQEAVVERIRAELADAEANLARFQELWQEGAISQQELDQRRLLVRQRQEDLRAAEA
TLSQLRLARERDLLNAQAQVQAAEAGLSLAQAQVQLGSLARNLELAEARLERTLIRAPRAGQVLKIHTRPGEVIPAGEGI
LELGNTDQMMVVAEVYETDILRVRPGQQATISNRALPETLQGRVERVGLQIGKKDVLNTDPAADVDARVVEVYIRLDPES
SARVAGLTNLQVNVAIDVEG

Sequences:

>Translated_340_residues
MRLPPQVGALGRLEPEGEVLRIAGSPGERLGELLVAEGDRVVAGQVLARLESYAERLAEREYAAAQLQEARARLQAETRF
SQAQIQEARTRLSRLDEPQQMQIRSQEAVVERIRAELADAEANLARFQELWQEGAISQQELDQRRLLVRQRQEDLRAAEA
TLSQLRLARERDLLNAQAQVQAAEAGLSLAQAQVQLGSLARNLELAEARLERTLIRAPRAGQVLKIHTRPGEVIPAGEGI
LELGNTDQMMVVAEVYETDILRVRPGQQATISNRALPETLQGRVERVGLQIGKKDVLNTDPAADVDARVVEVYIRLDPES
SARVAGLTNLQVNVAIDVEG
>Mature_340_residues
MRLPPQVGALGRLEPEGEVLRIAGSPGERLGELLVAEGDRVVAGQVLARLESYAERLAEREYAAAQLQEARARLQAETRF
SQAQIQEARTRLSRLDEPQQMQIRSQEAVVERIRAELADAEANLARFQELWQEGAISQQELDQRRLLVRQRQEDLRAAEA
TLSQLRLARERDLLNAQAQVQAAEAGLSLAQAQVQLGSLARNLELAEARLERTLIRAPRAGQVLKIHTRPGEVIPAGEGI
LELGNTDQMMVVAEVYETDILRVRPGQQATISNRALPETLQGRVERVGLQIGKKDVLNTDPAADVDARVVEVYIRLDPES
SARVAGLTNLQVNVAIDVEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1790519, Length=271, Percent_Identity=29.520295202952, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37546; Mature: 37546

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPPQVGALGRLEPEGEVLRIAGSPGERLGELLVAEGDRVVAGQVLARLESYAERLAER
CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
EYAAAQLQEARARLQAETRFSQAQIQEARTRLSRLDEPQQMQIRSQEAVVERIRAELADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EANLARFQELWQEGAISQQELDQRRLLVRQRQEDLRAAEATLSQLRLARERDLLNAQAQV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAEAGLSLAQAQVQLGSLARNLELAEARLERTLIRAPRAGQVLKIHTRPGEVIPAGEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCE
LELGNTDQMMVVAEVYETDILRVRPGQQATISNRALPETLQGRVERVGLQIGKKDVLNTD
EECCCCCCEEEEEEHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCC
PAADVDARVVEVYIRLDPESSARVAGLTNLQVNVAIDVEG
CCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MRLPPQVGALGRLEPEGEVLRIAGSPGERLGELLVAEGDRVVAGQVLARLESYAERLAER
CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
EYAAAQLQEARARLQAETRFSQAQIQEARTRLSRLDEPQQMQIRSQEAVVERIRAELADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EANLARFQELWQEGAISQQELDQRRLLVRQRQEDLRAAEATLSQLRLARERDLLNAQAQV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAEAGLSLAQAQVQLGSLARNLELAEARLERTLIRAPRAGQVLKIHTRPGEVIPAGEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCE
LELGNTDQMMVVAEVYETDILRVRPGQQATISNRALPETLQGRVERVGLQIGKKDVLNTD
EECCCCCCEEEEEEHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCC
PAADVDARVVEVYIRLDPESSARVAGLTNLQVNVAIDVEG
CCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA