| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is devC
Identifier: 86609022
GI number: 86609022
Start: 1630633
End: 1631817
Strand: Reverse
Name: devC
Synonym: CYB_1557
Alternate gene names: NA
Gene position: 1631817-1630633 (Counterclockwise)
Preceding gene: 86609023
Following gene: 86609021
Centisome position: 53.56
GC content: 59.07
Gene sequence:
>1185_bases ATGTACAGCCTGTTCAGTGTGGCTTTTATCGCCCATCGGATCCCGTTGGCCTGGCTGCAGTTGACGCGGGAGAAGATCCG CCTGCTGGTGGCCCTGGCGGGCATTGCCTTTGCTTGCATCTTGATGTTCATGCAGTTGGGCTTCCAAGACAGTCTGCTGG AAAGTGCCATCCGCTTCCACGTGGCCCTGAAGGGAGAGATCTTCCTGGTCAGCCCCCAGTCCAACGCCCTGATTGCCATG AACACCTTCTCCCAGCGGCGACTCTATCAGGCTTTGGGCTTTGAGGGGGTGCGGGCCATCTCGCCTGTCTATGTGGGCTT TGCCCTCTGGAAAAACCCAGAGACCCGCCGTACCCGCAGCATTTTTGTGGTAGGAGTGGATCCCTCGGCTGATCTGTTGG ACTTGCCGGAACTGACGCCGGACAAGCTGGAAGAGATCAAAAAGGCGGACGTGGTGCTGTTTGACCGCCGCTCCCGCAGC GAGTTTGGCCCCATCCCAGAGTGGTTTGAGTCCGGGCGAGAGGTGGTTACTGAGGTGGGAAACCGCCGCGTCCAGGTGGG GGGCCTGTTTGAGATGGGGGCCACCTTTGGAGCCGACGGCACCATCCTCACCAGCGACCTCAATTTCCTGCGCATTTTTC CGCAGCGGGGGCGCGGCCTAGTGGATATCGGCGTGGTGCAGCTTCAGCCGGGTGTGGATCCGGATCCCTTGGTGCGGCAG ATGCGGGCTTTGCTGCCGGAAGATGTGCGGGTGCTCTCACGGGCGGAGTTTATCGATATGGAGCAAACCTACTGGGAAGA GGGCACAGCCATCGGCTTTATTTTCGGCCTGGGGGTGGGCATGGGCTTTATTGTCGGCATTGTGATTGTCTATCAAATTC TCTACACCGATGTGTCGGATCACCTGGCAGAATATGCCACTCTCAAAGCCATGGGCTATACCGATACCTACCTGCTGGGG GTGGTATTTCAGGAGGCGCTCCTGCTGGCCGGCTTGGGGTACATTCCTGCCTTTGCCCTGTCGGTTTTGCTCTACGATTT GACGGCCAATGCCACGTTGCTGCCTATTGCCATGACCTTCAACCGGGCAGTGCTGGTGCTGGGGCTGGCGGTGAGCATGT GTTTCATCTCAGGAGCGATTGCCGTGCGACGGCTGCGGGCAGCCGATCCTGCCGACATTTTCTAG
Upstream 100 bases:
>100_bases AGTGTATATCCGCCTGGATCCGGAGAGCAGCGCCCGCGTGGCTGGCCTGACCAACCTGCAGGTGAATGTGGCCATCGATG TCGAGGGGTAGGCTCAGCCC
Downstream 100 bases:
>100_bases AGTTTTGGCTGTGGGCAGGGCGCCGGGGCGTTGGTAAGTCAATAGTCTGCCAAAGGGGATCGGATGGATGGTGAAGGGTT TGAGCTAGGCTGTCTAAAAA
Product: glycolipid ABC exporter (DevE) family permease protein
Products: NA
Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter Permease Protein; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFHVALKGEIFLVSPQSNALIAM NTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRSIFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRS EFGPIPEWFESGREVVTEVGNRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSDHLAEYATLKAMGYTDTYLLG VVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTFNRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF
Sequences:
>Translated_394_residues MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFHVALKGEIFLVSPQSNALIAM NTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRSIFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRS EFGPIPEWFESGREVVTEVGNRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSDHLAEYATLKAMGYTDTYLLG VVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTFNRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF >Mature_394_residues MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFHVALKGEIFLVSPQSNALIAM NTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRSIFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRS EFGPIPEWFESGREVVTEVGNRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSDHLAEYATLKAMGYTDTYLLG VVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTFNRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43587; Mature: 43587
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEE VALKGEIFLVSPQSNALIAMNTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRS EEEECEEEEECCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE IFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRSEFGPIPEWFESGREVVTEVG EEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC NRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ CCEEEECCCHHHCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHH MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSD HHHHCHHHHHHHHHHHHHCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAEYATLKAMGYTDTYLLGVVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHH NRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEE VALKGEIFLVSPQSNALIAMNTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRS EEEECEEEEECCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE IFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRSEFGPIPEWFESGREVVTEVG EEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC NRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ CCEEEECCCHHHCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHH MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSD HHHHCHHHHHHHHHHHHHCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAEYATLKAMGYTDTYLLGVVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHH NRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA