Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is devC

Identifier: 86609022

GI number: 86609022

Start: 1630633

End: 1631817

Strand: Reverse

Name: devC

Synonym: CYB_1557

Alternate gene names: NA

Gene position: 1631817-1630633 (Counterclockwise)

Preceding gene: 86609023

Following gene: 86609021

Centisome position: 53.56

GC content: 59.07

Gene sequence:

>1185_bases
ATGTACAGCCTGTTCAGTGTGGCTTTTATCGCCCATCGGATCCCGTTGGCCTGGCTGCAGTTGACGCGGGAGAAGATCCG
CCTGCTGGTGGCCCTGGCGGGCATTGCCTTTGCTTGCATCTTGATGTTCATGCAGTTGGGCTTCCAAGACAGTCTGCTGG
AAAGTGCCATCCGCTTCCACGTGGCCCTGAAGGGAGAGATCTTCCTGGTCAGCCCCCAGTCCAACGCCCTGATTGCCATG
AACACCTTCTCCCAGCGGCGACTCTATCAGGCTTTGGGCTTTGAGGGGGTGCGGGCCATCTCGCCTGTCTATGTGGGCTT
TGCCCTCTGGAAAAACCCAGAGACCCGCCGTACCCGCAGCATTTTTGTGGTAGGAGTGGATCCCTCGGCTGATCTGTTGG
ACTTGCCGGAACTGACGCCGGACAAGCTGGAAGAGATCAAAAAGGCGGACGTGGTGCTGTTTGACCGCCGCTCCCGCAGC
GAGTTTGGCCCCATCCCAGAGTGGTTTGAGTCCGGGCGAGAGGTGGTTACTGAGGTGGGAAACCGCCGCGTCCAGGTGGG
GGGCCTGTTTGAGATGGGGGCCACCTTTGGAGCCGACGGCACCATCCTCACCAGCGACCTCAATTTCCTGCGCATTTTTC
CGCAGCGGGGGCGCGGCCTAGTGGATATCGGCGTGGTGCAGCTTCAGCCGGGTGTGGATCCGGATCCCTTGGTGCGGCAG
ATGCGGGCTTTGCTGCCGGAAGATGTGCGGGTGCTCTCACGGGCGGAGTTTATCGATATGGAGCAAACCTACTGGGAAGA
GGGCACAGCCATCGGCTTTATTTTCGGCCTGGGGGTGGGCATGGGCTTTATTGTCGGCATTGTGATTGTCTATCAAATTC
TCTACACCGATGTGTCGGATCACCTGGCAGAATATGCCACTCTCAAAGCCATGGGCTATACCGATACCTACCTGCTGGGG
GTGGTATTTCAGGAGGCGCTCCTGCTGGCCGGCTTGGGGTACATTCCTGCCTTTGCCCTGTCGGTTTTGCTCTACGATTT
GACGGCCAATGCCACGTTGCTGCCTATTGCCATGACCTTCAACCGGGCAGTGCTGGTGCTGGGGCTGGCGGTGAGCATGT
GTTTCATCTCAGGAGCGATTGCCGTGCGACGGCTGCGGGCAGCCGATCCTGCCGACATTTTCTAG

Upstream 100 bases:

>100_bases
AGTGTATATCCGCCTGGATCCGGAGAGCAGCGCCCGCGTGGCTGGCCTGACCAACCTGCAGGTGAATGTGGCCATCGATG
TCGAGGGGTAGGCTCAGCCC

Downstream 100 bases:

>100_bases
AGTTTTGGCTGTGGGCAGGGCGCCGGGGCGTTGGTAAGTCAATAGTCTGCCAAAGGGGATCGGATGGATGGTGAAGGGTT
TGAGCTAGGCTGTCTAAAAA

Product: glycolipid ABC exporter (DevE) family permease protein

Products: NA

Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter Permease Protein; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFHVALKGEIFLVSPQSNALIAM
NTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRSIFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRS
EFGPIPEWFESGREVVTEVGNRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ
MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSDHLAEYATLKAMGYTDTYLLG
VVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTFNRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF

Sequences:

>Translated_394_residues
MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFHVALKGEIFLVSPQSNALIAM
NTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRSIFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRS
EFGPIPEWFESGREVVTEVGNRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ
MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSDHLAEYATLKAMGYTDTYLLG
VVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTFNRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF
>Mature_394_residues
MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFHVALKGEIFLVSPQSNALIAM
NTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRSIFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRS
EFGPIPEWFESGREVVTEVGNRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ
MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSDHLAEYATLKAMGYTDTYLLG
VVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTFNRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43587; Mature: 43587

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEE
VALKGEIFLVSPQSNALIAMNTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRS
EEEECEEEEECCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE
IFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRSEFGPIPEWFESGREVVTEVG
EEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
NRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ
CCEEEECCCHHHCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHH
MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSD
HHHHCHHHHHHHHHHHHHCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLAEYATLKAMGYTDTYLLGVVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHH
NRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYSLFSVAFIAHRIPLAWLQLTREKIRLLVALAGIAFACILMFMQLGFQDSLLESAIRFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEE
VALKGEIFLVSPQSNALIAMNTFSQRRLYQALGFEGVRAISPVYVGFALWKNPETRRTRS
EEEECEEEEECCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE
IFVVGVDPSADLLDLPELTPDKLEEIKKADVVLFDRRSRSEFGPIPEWFESGREVVTEVG
EEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
NRRVQVGGLFEMGATFGADGTILTSDLNFLRIFPQRGRGLVDIGVVQLQPGVDPDPLVRQ
CCEEEECCCHHHCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHH
MRALLPEDVRVLSRAEFIDMEQTYWEEGTAIGFIFGLGVGMGFIVGIVIVYQILYTDVSD
HHHHCHHHHHHHHHHHHHCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLAEYATLKAMGYTDTYLLGVVFQEALLLAGLGYIPAFALSVLLYDLTANATLLPIAMTF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHH
NRAVLVLGLAVSMCFISGAIAVRRLRAADPADIF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA