| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609012
Identifier: 86609012
GI number: 86609012
Start: 1622493
End: 1623155
Strand: Reverse
Name: 86609012
Synonym: CYB_1547
Alternate gene names: NA
Gene position: 1623155-1622493 (Counterclockwise)
Preceding gene: 86609013
Following gene: 86609010
Centisome position: 53.28
GC content: 52.19
Gene sequence:
>663_bases ATGGGGTTGCTTATTTTTATCTTGTTTTTAGCTCTGGCTGCCGGGATCTTGGCTCTAGCCCTTTACCACGAAAAGAAACG TCGAGAAGCTCTGGAACGGGTAGCTGCACAGCTAGGAATGCGCTTTTCTGCCCAGTTGCCTGAAGAGATTCGATCTCGCT TGTTGCAAGCAGGCTTTGGACTGTTTGAACGAGGCCATGGGCGGCGTTTCTATAATTCGATGTCCAAGCGGCTGATCGAT GGCACTGAGATTACCGTTTTTGATTACCAATACACCAGCGGCAGTGGCAAGAGTTCTAGCACTTATCGCCAGTCCGTCTT CTACGCCTATCACGAGGATCTTCATCTGCCCCGTTTTCGGCTGCACCCCGAAAATGCCCTTTTCCATGGCATCGCCAAAG CTTTTGGCATGCAAGATATCAATTTCGAGAGCCACCCTAAGTTCTCCCGGAGCTATCTCTTGCGAGGAGAGAATGAAGCC CAAGTTCGGCTGCGGTTCCATCCTGGCGTCCTTGGTTTTTGGGAGCAGCATCCCAACTATTGCGCCGAAGGAGCTGGCGC CCACCTCATTCTTTGGCAAAATGACCGACAGGTGAGTCCCGAAGGGATGGCAGAATGGATGCACTTGGGGGAAGAGTTGA CTCAACGGCTGCGGCGTATGTAG
Upstream 100 bases:
>100_bases GAGACCGCTCGGCTGAATGGTCGAAGGCAGGGATCCTTTTGGAAATCTGCTCAGGTATTGTGGGGATGGGCGCTGCAGTC TGTAAGCCGAGGGAGACGGT
Downstream 100 bases:
>100_bases TAGCAGAGCCTACGGCCCCCCGCCGCGAACGGTCAACCTCGGCCTAAACCTCACCCCAAGAGGGTGCGCTGCAATCTCAA GAACCTCTCTACTGAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MGLLIFILFLALAAGILALALYHEKKRREALERVAAQLGMRFSAQLPEEIRSRLLQAGFGLFERGHGRRFYNSMSKRLID GTEITVFDYQYTSGSGKSSSTYRQSVFYAYHEDLHLPRFRLHPENALFHGIAKAFGMQDINFESHPKFSRSYLLRGENEA QVRLRFHPGVLGFWEQHPNYCAEGAGAHLILWQNDRQVSPEGMAEWMHLGEELTQRLRRM
Sequences:
>Translated_220_residues MGLLIFILFLALAAGILALALYHEKKRREALERVAAQLGMRFSAQLPEEIRSRLLQAGFGLFERGHGRRFYNSMSKRLID GTEITVFDYQYTSGSGKSSSTYRQSVFYAYHEDLHLPRFRLHPENALFHGIAKAFGMQDINFESHPKFSRSYLLRGENEA QVRLRFHPGVLGFWEQHPNYCAEGAGAHLILWQNDRQVSPEGMAEWMHLGEELTQRLRRM >Mature_219_residues GLLIFILFLALAAGILALALYHEKKRREALERVAAQLGMRFSAQLPEEIRSRLLQAGFGLFERGHGRRFYNSMSKRLIDG TEITVFDYQYTSGSGKSSSTYRQSVFYAYHEDLHLPRFRLHPENALFHGIAKAFGMQDINFESHPKFSRSYLLRGENEAQ VRLRFHPGVLGFWEQHPNYCAEGAGAHLILWQNDRQVSPEGMAEWMHLGEELTQRLRRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25447; Mature: 25315
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLIFILFLALAAGILALALYHEKKRREALERVAAQLGMRFSAQLPEEIRSRLLQAGFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCH LFERGHGRRFYNSMSKRLIDGTEITVFDYQYTSGSGKSSSTYRQSVFYAYHEDLHLPRFR HHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEE LHPENALFHGIAKAFGMQDINFESHPKFSRSYLLRGENEAQVRLRFHPGVLGFWEQHPNY ECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCEEHHHHCCCCH CAEGAGAHLILWQNDRQVSPEGMAEWMHLGEELTQRLRRM HHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLLIFILFLALAAGILALALYHEKKRREALERVAAQLGMRFSAQLPEEIRSRLLQAGFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCH LFERGHGRRFYNSMSKRLIDGTEITVFDYQYTSGSGKSSSTYRQSVFYAYHEDLHLPRFR HHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEE LHPENALFHGIAKAFGMQDINFESHPKFSRSYLLRGENEAQVRLRFHPGVLGFWEQHPNY ECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCEEHHHHCCCCH CAEGAGAHLILWQNDRQVSPEGMAEWMHLGEELTQRLRRM HHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA