| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pyk [H]
Identifier: 86609010
GI number: 86609010
Start: 1620132
End: 1621991
Strand: Reverse
Name: pyk [H]
Synonym: CYB_1545
Alternate gene names: 86609010
Gene position: 1621991-1620132 (Counterclockwise)
Preceding gene: 86609012
Following gene: 86609009
Centisome position: 53.24
GC content: 59.84
Gene sequence:
>1860_bases ATGCATTTGAGGGATTCTTTTCGACGCACCAAAATTGTTGCCACCATCGGCCCTGCCAGCTCAAATCCAGCCATTCTCAG GGAGATGATCCTGCAAGGGGCAACCACCCTTCGCCTCAACTTCTCCCATGGGGATCACGAGCTACACCGCCGCAGCATTC GCCTGATCCGCCAAACCGCGATGGATCTGGGCATCCAGGTCGCCATTTTGCAAGACCTGCAGGGGCCCAAAATCCGCCTG GGCAAGTTCGCCGAAGGCTCGATCACCCTCAAGGCAGGGGATCCCTTTGTGTTGACCAGCAAACCTGTCTTGGGATCCCA AGAGCGCAGTTGGGTCACCTACGACAAGCTGGCCCAAGAAGTGCCCGAAGGAGCGACGATCCTCATCGACGATGGTCGAG TGGAGATGCGGGTGGAAGCCGTGGATCCGGAAGCGGGCGAACTCTTCTGCCGCACCATTGTCGGGGGTACCCTCTCCAAC AACAAGGGGGTCAATTTCCCCGGTGTGCGCCTGAGCATCCGCGCCGTGACCCCAAAAGACAAAGAAGATCTCTACTTCGG CCTCAACCAAGGGGTGGATTGGGTGGCCCTCAGCTTTGTGCGGGATCCCTCTGATGTGCTGGAGCTGCGGGAGCTCATCG CCTCTGCCAAACGGCCTTCTTCGGGCTCAGCCGACAAGCGGGTACCCATCATCGTCAAGATCGAGAAACACGAGGCCATT GAACAGCTGCCCCAGATTTTGGCCCTCAGCGACGGTGTGATGGTGGCGCGGGGAGATCTGGGGGTAGAGCTGCCTGCGGA AGAGGTGCCGATCCTGCAGAAGCGGGTGATCGCCCTGGCCAACTCCCTGGGGATCCCGGTAATTACGGCCACCCAAATGC TGGACAGCATGGTGCACAGCCCCCGGCCTACCCGTGCCGAAATCTCCGATGTGGCCAACGCCATTTTGGATGGCACCGAT GCCGTCATGCTCTCCAACGAGACGGCTGTGGGCAAATACCCTGTCGAGGCCGTTGCCACCATGGCCCGCATTGCCGTGCG CACCGAGCGCGATTACTTTGACCTGACCTACGCCGACCGACGACAACGCCTTCGCGCCCTTGCCATGCAGGAGCTGAGCC AAAACAACGGCAACAGTCCTGCCGGGATGCGGCCCAAAACCCTGATCACCGACTCGATCAGCCGCGCCGTGGGGGAGATC GCCCAAGAGTTGGATGCTGTAGCCGTGATGACCCTGACCAAAACAGGGGCTACCGCTCGCAATGTCTCTAAGTTTCGCCC CCGCACTCCCATCCTAGCCGTAACCCCCCATGTGGAAGTGGCACGGCGGCTGCAGTTGGTTTGGGGGGTACATCCGCTGT TGGTTATGGATTTGGCCACCACCCGCCAGACCTTTCAAGCGGCCATCAGCTTGGCTCAGGAAGATGGCTTGCTCAAGGAT GGCGACTTGGTGGTGCTCAGTGCAGGAACCCTGCCAGGCGTTGCGGGATCCACCGATCTGATCAAGGTGGATGTGGTGAA AGCGGTGGTGGCTCAAGGCAAAGGGTTTGGCAAAGGCATTGTCAGCGGCCCGGCCCGCATCTTGAGATCCAGCCTCGATG CCAGCAAAATCACCGCCGGAGACATTTTGGTTGCCCAATCCACCGACGCCAACTATGTGGAGGCCATCAAACAGGCAGCC GGCGTGATTACCGAAGAAGAGGGAGCCTCCTCTCATGCAGCAGTCATTGGCCTGCGGCTGGGGGTGCCGGTGCTGGTGGG GGTCAAGGATGCTACCCGCTTAATCCGGGATGGATCTATCGTCACTCTGAACCCAGAAAAAGGCATAGTGACCGCAGGAG CCGATGGCTTGGGCTTTTAA
Upstream 100 bases:
>100_bases AAAAAGCGGTGCCTCAAAAAAGACATAACGGGTTATCGTAATCAGAGAGATCCCTACGTGGGGGAAGGATCTGGGCTGCT CTCCCTTGGGAACAGTGGAC
Downstream 100 bases:
>100_bases GCGGGCCTTAAGGTTGCCTGCAATACAAACTTGTATCTCTTGCTACGAAACGAGACCAAGTTCTATGATGGGGGTAGCGA GGCAAGATTTTCCCTGACCC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MHLRDSFRRTKIVATIGPASSNPAILREMILQGATTLRLNFSHGDHELHRRSIRLIRQTAMDLGIQVAILQDLQGPKIRL GKFAEGSITLKAGDPFVLTSKPVLGSQERSWVTYDKLAQEVPEGATILIDDGRVEMRVEAVDPEAGELFCRTIVGGTLSN NKGVNFPGVRLSIRAVTPKDKEDLYFGLNQGVDWVALSFVRDPSDVLELRELIASAKRPSSGSADKRVPIIVKIEKHEAI EQLPQILALSDGVMVARGDLGVELPAEEVPILQKRVIALANSLGIPVITATQMLDSMVHSPRPTRAEISDVANAILDGTD AVMLSNETAVGKYPVEAVATMARIAVRTERDYFDLTYADRRQRLRALAMQELSQNNGNSPAGMRPKTLITDSISRAVGEI AQELDAVAVMTLTKTGATARNVSKFRPRTPILAVTPHVEVARRLQLVWGVHPLLVMDLATTRQTFQAAISLAQEDGLLKD GDLVVLSAGTLPGVAGSTDLIKVDVVKAVVAQGKGFGKGIVSGPARILRSSLDASKITAGDILVAQSTDANYVEAIKQAA GVITEEEGASSHAAVIGLRLGVPVLVGVKDATRLIRDGSIVTLNPEKGIVTAGADGLGF
Sequences:
>Translated_619_residues MHLRDSFRRTKIVATIGPASSNPAILREMILQGATTLRLNFSHGDHELHRRSIRLIRQTAMDLGIQVAILQDLQGPKIRL GKFAEGSITLKAGDPFVLTSKPVLGSQERSWVTYDKLAQEVPEGATILIDDGRVEMRVEAVDPEAGELFCRTIVGGTLSN NKGVNFPGVRLSIRAVTPKDKEDLYFGLNQGVDWVALSFVRDPSDVLELRELIASAKRPSSGSADKRVPIIVKIEKHEAI EQLPQILALSDGVMVARGDLGVELPAEEVPILQKRVIALANSLGIPVITATQMLDSMVHSPRPTRAEISDVANAILDGTD AVMLSNETAVGKYPVEAVATMARIAVRTERDYFDLTYADRRQRLRALAMQELSQNNGNSPAGMRPKTLITDSISRAVGEI AQELDAVAVMTLTKTGATARNVSKFRPRTPILAVTPHVEVARRLQLVWGVHPLLVMDLATTRQTFQAAISLAQEDGLLKD GDLVVLSAGTLPGVAGSTDLIKVDVVKAVVAQGKGFGKGIVSGPARILRSSLDASKITAGDILVAQSTDANYVEAIKQAA GVITEEEGASSHAAVIGLRLGVPVLVGVKDATRLIRDGSIVTLNPEKGIVTAGADGLGF >Mature_619_residues MHLRDSFRRTKIVATIGPASSNPAILREMILQGATTLRLNFSHGDHELHRRSIRLIRQTAMDLGIQVAILQDLQGPKIRL GKFAEGSITLKAGDPFVLTSKPVLGSQERSWVTYDKLAQEVPEGATILIDDGRVEMRVEAVDPEAGELFCRTIVGGTLSN NKGVNFPGVRLSIRAVTPKDKEDLYFGLNQGVDWVALSFVRDPSDVLELRELIASAKRPSSGSADKRVPIIVKIEKHEAI EQLPQILALSDGVMVARGDLGVELPAEEVPILQKRVIALANSLGIPVITATQMLDSMVHSPRPTRAEISDVANAILDGTD AVMLSNETAVGKYPVEAVATMARIAVRTERDYFDLTYADRRQRLRALAMQELSQNNGNSPAGMRPKTLITDSISRAVGEI AQELDAVAVMTLTKTGATARNVSKFRPRTPILAVTPHVEVARRLQLVWGVHPLLVMDLATTRQTFQAAISLAQEDGLLKD GDLVVLSAGTLPGVAGSTDLIKVDVVKAVVAQGKGFGKGIVSGPARILRSSLDASKITAGDILVAQSTDANYVEAIKQAA GVITEEEGASSHAAVIGLRLGVPVLVGVKDATRLIRDGSIVTLNPEKGIVTAGADGLGF
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=516, Percent_Identity=39.1472868217054, Blast_Score=314, Evalue=2e-85, Organism=Homo sapiens, GI10835121, Length=516, Percent_Identity=39.1472868217054, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI33286418, Length=519, Percent_Identity=38.3429672447013, Blast_Score=312, Evalue=5e-85, Organism=Homo sapiens, GI33286422, Length=519, Percent_Identity=38.5356454720617, Blast_Score=311, Evalue=8e-85, Organism=Homo sapiens, GI33286420, Length=519, Percent_Identity=38.5356454720617, Blast_Score=311, Evalue=8e-85, Organism=Homo sapiens, GI310128732, Length=300, Percent_Identity=40, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI310128730, Length=300, Percent_Identity=40, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI310128736, Length=248, Percent_Identity=36.6935483870968, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI310128734, Length=248, Percent_Identity=36.6935483870968, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI310128738, Length=227, Percent_Identity=35.2422907488987, Blast_Score=118, Evalue=2e-26, Organism=Escherichia coli, GI1787965, Length=503, Percent_Identity=42.7435387673956, Blast_Score=364, Evalue=1e-102, Organism=Escherichia coli, GI1788160, Length=504, Percent_Identity=38.2936507936508, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1787994, Length=100, Percent_Identity=34, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17544584, Length=510, Percent_Identity=38.6274509803922, Blast_Score=322, Evalue=4e-88, Organism=Caenorhabditis elegans, GI17506829, Length=510, Percent_Identity=38.4313725490196, Blast_Score=291, Evalue=9e-79, Organism=Caenorhabditis elegans, GI71984413, Length=510, Percent_Identity=38.4313725490196, Blast_Score=291, Evalue=1e-78, Organism=Caenorhabditis elegans, GI71984406, Length=510, Percent_Identity=38.4313725490196, Blast_Score=290, Evalue=1e-78, Organism=Caenorhabditis elegans, GI17506831, Length=510, Percent_Identity=38.4313725490196, Blast_Score=290, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6319279, Length=521, Percent_Identity=38.0038387715931, Blast_Score=296, Evalue=8e-81, Organism=Saccharomyces cerevisiae, GI6324923, Length=506, Percent_Identity=35.1778656126482, Blast_Score=272, Evalue=1e-73, Organism=Drosophila melanogaster, GI24648964, Length=518, Percent_Identity=38.4169884169884, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI28571814, Length=518, Percent_Identity=38.4169884169884, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI24648966, Length=481, Percent_Identity=36.7983367983368, Blast_Score=288, Evalue=6e-78, Organism=Drosophila melanogaster, GI24581235, Length=511, Percent_Identity=33.8551859099804, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI24646914, Length=297, Percent_Identity=40.7407407407407, Blast_Score=198, Evalue=1e-50,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 66234; Mature: 66234
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLRDSFRRTKIVATIGPASSNPAILREMILQGATTLRLNFSHGDHELHRRSIRLIRQTA CCCHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH MDLGIQVAILQDLQGPKIRLGKFAEGSITLKAGDPFVLTSKPVLGSQERSWVTYDKLAQE HHCCEEEEEECCCCCCCEEECEECCCEEEEECCCCEEEECCCCCCCCCCCEEHHHHHHHH VPEGATILIDDGRVEMRVEAVDPEAGELFCRTIVGGTLSNNKGVNFPGVRLSIRAVTPKD CCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC KEDLYFGLNQGVDWVALSFVRDPSDVLELRELIASAKRPSSGSADKRVPIIVKIEKHEAI CCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHH EQLPQILALSDGVMVARGDLGVELPAEEVPILQKRVIALANSLGIPVITATQMLDSMVHS HHHHHHHHHCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHC PRPTRAEISDVANAILDGTDAVMLSNETAVGKYPVEAVATMARIAVRTERDYFDLTYADR CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHH RQRLRALAMQELSQNNGNSPAGMRPKTLITDSISRAVGEIAQELDAVAVMTLTKTGATAR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHH NVSKFRPRTPILAVTPHVEVARRLQLVWGVHPLLVMDLATTRQTFQAAISLAQEDGLLKD HHHHCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEC GDLVVLSAGTLPGVAGSTDLIKVDVVKAVVAQGKGFGKGIVSGPARILRSSLDASKITAG CCEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEC DILVAQSTDANYVEAIKQAAGVITEEEGASSHAAVIGLRLGVPVLVGVKDATRLIRDGSI CEEEEECCCCHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHCCCE VTLNPEKGIVTAGADGLGF EEECCCCCEEEECCCCCCC >Mature Secondary Structure MHLRDSFRRTKIVATIGPASSNPAILREMILQGATTLRLNFSHGDHELHRRSIRLIRQTA CCCHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH MDLGIQVAILQDLQGPKIRLGKFAEGSITLKAGDPFVLTSKPVLGSQERSWVTYDKLAQE HHCCEEEEEECCCCCCCEEECEECCCEEEEECCCCEEEECCCCCCCCCCCEEHHHHHHHH VPEGATILIDDGRVEMRVEAVDPEAGELFCRTIVGGTLSNNKGVNFPGVRLSIRAVTPKD CCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC KEDLYFGLNQGVDWVALSFVRDPSDVLELRELIASAKRPSSGSADKRVPIIVKIEKHEAI CCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHH EQLPQILALSDGVMVARGDLGVELPAEEVPILQKRVIALANSLGIPVITATQMLDSMVHS HHHHHHHHHCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHC PRPTRAEISDVANAILDGTDAVMLSNETAVGKYPVEAVATMARIAVRTERDYFDLTYADR CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHH RQRLRALAMQELSQNNGNSPAGMRPKTLITDSISRAVGEIAQELDAVAVMTLTKTGATAR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHH NVSKFRPRTPILAVTPHVEVARRLQLVWGVHPLLVMDLATTRQTFQAAISLAQEDGLLKD HHHHCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEC GDLVVLSAGTLPGVAGSTDLIKVDVVKAVVAQGKGFGKGIVSGPARILRSSLDASKITAG CCEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEC DILVAQSTDANYVEAIKQAAGVITEEEGASSHAAVIGLRLGVPVLVGVKDATRLIRDGSI CEEEEECCCCHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHCCCE VTLNPEKGIVTAGADGLGF EEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]