| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608995
Identifier: 86608995
GI number: 86608995
Start: 1605871
End: 1606329
Strand: Reverse
Name: 86608995
Synonym: CYB_1529
Alternate gene names: NA
Gene position: 1606329-1605871 (Counterclockwise)
Preceding gene: 86608997
Following gene: 86608990
Centisome position: 52.72
GC content: 53.16
Gene sequence:
>459_bases ATGAGTGAGCAGTGGTATTTTGCATACGGAAGTAACCTAGATGCCCAGCAGATGGGACACCGTACTGTTGATTTCAAGGA AGCTAGGCGTGCTCGTTTGCAGGGATACCGCCTGACGTTCAACAAGCGCGGCAACGATGGAACCGGCAAGGCCAACATTG TCCGGGATCCCTCTGGGGTTGTGTGGGGAGTTGCCTATCTGTGCAGCTCGGACAGGCTGGAGAGGATGGATCGGTATGAA GGAATTCCGGGAGGTCATTACCGTCGCCAGCAGGTTCAGGTTCGAAGCGATGAGGGTGAAGTGATCGAAGCAATGACTTA CGTGGCGGGAGATTCATTCATTGATGATTCATTGATCCCAAGCGAGGGATATCTTCAAGGAATCTTGAAGGGGGCACGAG AGCATGGGCTTCCCCCCGACTACATTCATCAAATTGAAGCGATGGGGTTGGGTGGCTGA
Upstream 100 bases:
>100_bases AAGTAGCTCATGGAGGGGCGGGATCCCGTGATGCTAATGTGCTCAATATCTCAGTGTAATTCTGGGTAGGCGGGTTCACC CGACACCAAGGGAACTAGAG
Downstream 100 bases:
>100_bases GAGCACTCTGTCCAAGGGGATTGAGGCTGCTGGCAAACAGGTTCCTGCCCCTGACCTTAAGATGGAGCCTCAAACCAGGT GGGTTGATCCCGAACGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGVVWGVAYLCSSDRLERMDRYE GIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIPSEGYLQGILKGAREHGLPPDYIHQIEAMGLGG
Sequences:
>Translated_152_residues MSEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGVVWGVAYLCSSDRLERMDRYE GIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIPSEGYLQGILKGAREHGLPPDYIHQIEAMGLGG >Mature_151_residues SEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGVVWGVAYLCSSDRLERMDRYEG IPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIPSEGYLQGILKGAREHGLPPDYIHQIEAMGLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13129018, Length=148, Percent_Identity=33.7837837837838, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17076; Mature: 16945
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGV CCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCH VWGVAYLCSSDRLERMDRYEGIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIP HHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCC SEGYLQGILKGAREHGLPPDYIHQIEAMGLGG CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGV CCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCH VWGVAYLCSSDRLERMDRYEGIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIP HHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCC SEGYLQGILKGAREHGLPPDYIHQIEAMGLGG CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA