Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608995

Identifier: 86608995

GI number: 86608995

Start: 1605871

End: 1606329

Strand: Reverse

Name: 86608995

Synonym: CYB_1529

Alternate gene names: NA

Gene position: 1606329-1605871 (Counterclockwise)

Preceding gene: 86608997

Following gene: 86608990

Centisome position: 52.72

GC content: 53.16

Gene sequence:

>459_bases
ATGAGTGAGCAGTGGTATTTTGCATACGGAAGTAACCTAGATGCCCAGCAGATGGGACACCGTACTGTTGATTTCAAGGA
AGCTAGGCGTGCTCGTTTGCAGGGATACCGCCTGACGTTCAACAAGCGCGGCAACGATGGAACCGGCAAGGCCAACATTG
TCCGGGATCCCTCTGGGGTTGTGTGGGGAGTTGCCTATCTGTGCAGCTCGGACAGGCTGGAGAGGATGGATCGGTATGAA
GGAATTCCGGGAGGTCATTACCGTCGCCAGCAGGTTCAGGTTCGAAGCGATGAGGGTGAAGTGATCGAAGCAATGACTTA
CGTGGCGGGAGATTCATTCATTGATGATTCATTGATCCCAAGCGAGGGATATCTTCAAGGAATCTTGAAGGGGGCACGAG
AGCATGGGCTTCCCCCCGACTACATTCATCAAATTGAAGCGATGGGGTTGGGTGGCTGA

Upstream 100 bases:

>100_bases
AAGTAGCTCATGGAGGGGCGGGATCCCGTGATGCTAATGTGCTCAATATCTCAGTGTAATTCTGGGTAGGCGGGTTCACC
CGACACCAAGGGAACTAGAG

Downstream 100 bases:

>100_bases
GAGCACTCTGTCCAAGGGGATTGAGGCTGCTGGCAAACAGGTTCCTGCCCCTGACCTTAAGATGGAGCCTCAAACCAGGT
GGGTTGATCCCGAACGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGVVWGVAYLCSSDRLERMDRYE
GIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIPSEGYLQGILKGAREHGLPPDYIHQIEAMGLGG

Sequences:

>Translated_152_residues
MSEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGVVWGVAYLCSSDRLERMDRYE
GIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIPSEGYLQGILKGAREHGLPPDYIHQIEAMGLGG
>Mature_151_residues
SEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGVVWGVAYLCSSDRLERMDRYEG
IPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIPSEGYLQGILKGAREHGLPPDYIHQIEAMGLGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI13129018, Length=148, Percent_Identity=33.7837837837838, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17076; Mature: 16945

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGV
CCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCH
VWGVAYLCSSDRLERMDRYEGIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIP
HHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
SEGYLQGILKGAREHGLPPDYIHQIEAMGLGG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEQWYFAYGSNLDAQQMGHRTVDFKEARRARLQGYRLTFNKRGNDGTGKANIVRDPSGV
CCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCH
VWGVAYLCSSDRLERMDRYEGIPGGHYRRQQVQVRSDEGEVIEAMTYVAGDSFIDDSLIP
HHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
SEGYLQGILKGAREHGLPPDYIHQIEAMGLGG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA