Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608990

Identifier: 86608990

GI number: 86608990

Start: 1602950

End: 1603453

Strand: Reverse

Name: 86608990

Synonym: CYB_1523

Alternate gene names: NA

Gene position: 1603453-1602950 (Counterclockwise)

Preceding gene: 86608995

Following gene: 86608988

Centisome position: 52.63

GC content: 60.52

Gene sequence:

>504_bases
ATGGTGGTTAGTTTGGCAGCACAGGCCGCAACCCTTGTGGATACTGCTCCCCAAAACGGGATCCCGACGGCGGCAATGCA
ACAGGTGGCGGATGTGCTCACTCAGGTGGCTCAACACCTGGATCACCTGCAATACACCACCTTGCGCTACCCCGATGGCG
GCTGGCTGACGGTGCGGGTGGTCGAGGATCCTGCTGCTGGCGACTCATCCTCAGAGGGATCCCAGCCGACGACCCATCTG
TGGATCCCGGCCTTCGGCCACCTGGAAGATGCCCACACCACGCTGGCAGAGCTTAAGGATCGAGCGCCGGAGCTGGAGAC
CGCTTCTTTTGGGGTCTTGGAGCTGTTGTTCTTGGCGTTGGGCCTTTCTCGGGCCGATGGTATTGTCTTTTACGACCAAG
CTGGGGATCGGCAACAGGGCAAAACCGTAGCCTGCCGAGCTCTGACGGAACAGGTCAACCGGTCTCTTCGCAGATGGGCT
TCCCCACCCCCTTCAATGGCTTGA

Upstream 100 bases:

>100_bases
GCAACTTCCGCCGTGACAGGGCGGTGCTCTAACCAATTGAACTACAGCCCCAATCGCTGCGAATATCTATTCTGGATGTG
GACGAGGATTGTTGTCAATC

Downstream 100 bases:

>100_bases
GCTCTTGAACTTTTCTCTTTTATTTTATGGTTTTGTGGTCATTTCGATTCAAACTAGGACAAAGCGTTGAATGCGGAGGG
CCAGAAGGCTTTTCTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MVVSLAAQAATLVDTAPQNGIPTAAMQQVADVLTQVAQHLDHLQYTTLRYPDGGWLTVRVVEDPAAGDSSSEGSQPTTHL
WIPAFGHLEDAHTTLAELKDRAPELETASFGVLELLFLALGLSRADGIVFYDQAGDRQQGKTVACRALTEQVNRSLRRWA
SPPPSMA

Sequences:

>Translated_167_residues
MVVSLAAQAATLVDTAPQNGIPTAAMQQVADVLTQVAQHLDHLQYTTLRYPDGGWLTVRVVEDPAAGDSSSEGSQPTTHL
WIPAFGHLEDAHTTLAELKDRAPELETASFGVLELLFLALGLSRADGIVFYDQAGDRQQGKTVACRALTEQVNRSLRRWA
SPPPSMA
>Mature_167_residues
MVVSLAAQAATLVDTAPQNGIPTAAMQQVADVLTQVAQHLDHLQYTTLRYPDGGWLTVRVVEDPAAGDSSSEGSQPTTHL
WIPAFGHLEDAHTTLAELKDRAPELETASFGVLELLFLALGLSRADGIVFYDQAGDRQQGKTVACRALTEQVNRSLRRWA
SPPPSMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17975; Mature: 17975

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVSLAAQAATLVDTAPQNGIPTAAMQQVADVLTQVAQHLDHLQYTTLRYPDGGWLTVRV
CEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEE
VEDPAAGDSSSEGSQPTTHLWIPAFGHLEDAHTTLAELKDRAPELETASFGVLELLFLAL
EECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
GLSRADGIVFYDQAGDRQQGKTVACRALTEQVNRSLRRWASPPPSMA
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVVSLAAQAATLVDTAPQNGIPTAAMQQVADVLTQVAQHLDHLQYTTLRYPDGGWLTVRV
CEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEE
VEDPAAGDSSSEGSQPTTHLWIPAFGHLEDAHTTLAELKDRAPELETASFGVLELLFLAL
EECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
GLSRADGIVFYDQAGDRQQGKTVACRALTEQVNRSLRRWASPPPSMA
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA