| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608985
Identifier: 86608985
GI number: 86608985
Start: 1595184
End: 1595483
Strand: Reverse
Name: 86608985
Synonym: CYB_1518
Alternate gene names: NA
Gene position: 1595483-1595184 (Counterclockwise)
Preceding gene: 86608986
Following gene: 86608984
Centisome position: 52.37
GC content: 64.0
Gene sequence:
>300_bases GTGGAGCGGCTGCCTCACGAGCAGGGATGTGAAGGACAGGGATCCCGCCGCCAGCTTCTCTCAGTGGGCATAGGGGCCCA TGGGCTAGTGGCGGTGGGCATTTCTGCCCATGGGGTGGTAGCCATCGGCGTGGTCACCCACGGCATCCTCTCCATTGGCC TAGTAGCCATGGGCGCTCTCTCCTTTGGGCTGGTGTCCATGGGCTTGGCCAGCGCCGGCCTGGTGTCCATGGGTCTCTCC AGTTGGGGCCAGCACAGCATGAGCCTGATGGAATCCCACGGATCCCATCACCATCCCTAG
Upstream 100 bases:
>100_bases CGGTGGCGGCCTACGTTTTGGATCGCGCTGAGCACAACTGGAGTAGAGGCTAGTGTCCAAAGAGAGGACTCAAGATCCAG CCCTGCTCCAGGGGAGACCA
Downstream 100 bases:
>100_bases GTTTTGACCAACAAACACTGCATTTTTCTCTTTCCCTACAGGTTTATAAGGAGCATCTGCGAATGTTCAGTCTGCAAAGT TACTTGACCCTGGCCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MERLPHEQGCEGQGSRRQLLSVGIGAHGLVAVGISAHGVVAIGVVTHGILSIGLVAMGALSFGLVSMGLASAGLVSMGLS SWGQHSMSLMESHGSHHHP
Sequences:
>Translated_99_residues MERLPHEQGCEGQGSRRQLLSVGIGAHGLVAVGISAHGVVAIGVVTHGILSIGLVAMGALSFGLVSMGLASAGLVSMGLS SWGQHSMSLMESHGSHHHP >Mature_99_residues MERLPHEQGCEGQGSRRQLLSVGIGAHGLVAVGISAHGVVAIGVVTHGILSIGLVAMGALSFGLVSMGLASAGLVSMGLS SWGQHSMSLMESHGSHHHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9999; Mature: 9999
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLPHEQGCEGQGSRRQLLSVGIGAHGLVAVGISAHGVVAIGVVTHGILSIGLVAMGAL CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH SFGLVSMGLASAGLVSMGLSSWGQHSMSLMESHGSHHHP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MERLPHEQGCEGQGSRRQLLSVGIGAHGLVAVGISAHGVVAIGVVTHGILSIGLVAMGAL CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH SFGLVSMGLASAGLVSMGLSSWGQHSMSLMESHGSHHHP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA