Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608972

Identifier: 86608972

GI number: 86608972

Start: 1579254

End: 1579796

Strand: Reverse

Name: 86608972

Synonym: CYB_1505

Alternate gene names: NA

Gene position: 1579796-1579254 (Counterclockwise)

Preceding gene: 86608973

Following gene: 86608971

Centisome position: 51.85

GC content: 60.96

Gene sequence:

>543_bases
ATGAAGTCTGCTGCTCGCCTAGCTTGTCTGCTTGCCGGACTGATCCTAGGAGCGGGGATCCCCGTCATTGCTCCCGCCCC
CGCCCTTCCCGTTGCCCAAGCCGGTTTCCGGCCCTATCTCAATGCCCGTTTCGGCTACCGCATCGACTACCCGGCAGACT
TTATCCCGCAAGGGGAATCCGACAATGGCGACGGCCAAGTGTTCCTCGGTCAAGACGGGGCTGAGCTGCGCGTTTGGGGT
GGGTACAACATTTTTCAAGCAACGCCCGCCAGCGCCCTGCAGGAAGAACTTCGCCGCAGCCGGGAAAACCAACGCCGGGT
TACTTACCAAGCTGTTGGCCGGGATTTCTTTGTGGTCTCCGGCTACGAGCCCGTTCGTGTCAGCGGTGCGGAGCCCTTTG
GCCAGCGGATTTTCTATCTCAAAACAGTTGTCCGCCCTTCGCTGCAAGCTGGCTTTGAGTTCGTGTACCCGGCCAGCCGG
CGCGAGCGCTATGACCGAGATGTGGAAGCTATAGCCCGTTCCCTGCGCCTTGCCGATCCCTGA

Upstream 100 bases:

>100_bases
CTTTTGGGAAAGAGCTTGGACAAACCAAATTCTGTCCCCCTAGGAGAGGGGCTGGAGGTGAGAGAGCTTAGGATAGCTAC
AGATTAGAGCAATCAAAACC

Downstream 100 bases:

>100_bases
GCTAGACCCAAGTTGGGGCATGATCGTAGGGATCCCTGGCAAAAACGATGGTGAAGAAACCTCTGGATGATTGCCTGCTG
GAGCGGATGCGGGTTGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKSAARLACLLAGLILGAGIPVIAPAPALPVAQAGFRPYLNARFGYRIDYPADFIPQGESDNGDGQVFLGQDGAELRVWG
GYNIFQATPASALQEELRRSRENQRRVTYQAVGRDFFVVSGYEPVRVSGAEPFGQRIFYLKTVVRPSLQAGFEFVYPASR
RERYDRDVEAIARSLRLADP

Sequences:

>Translated_180_residues
MKSAARLACLLAGLILGAGIPVIAPAPALPVAQAGFRPYLNARFGYRIDYPADFIPQGESDNGDGQVFLGQDGAELRVWG
GYNIFQATPASALQEELRRSRENQRRVTYQAVGRDFFVVSGYEPVRVSGAEPFGQRIFYLKTVVRPSLQAGFEFVYPASR
RERYDRDVEAIARSLRLADP
>Mature_180_residues
MKSAARLACLLAGLILGAGIPVIAPAPALPVAQAGFRPYLNARFGYRIDYPADFIPQGESDNGDGQVFLGQDGAELRVWG
GYNIFQATPASALQEELRRSRENQRRVTYQAVGRDFFVVSGYEPVRVSGAEPFGQRIFYLKTVVRPSLQAGFEFVYPASR
RERYDRDVEAIARSLRLADP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19916; Mature: 19916

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAARLACLLAGLILGAGIPVIAPAPALPVAQAGFRPYLNARFGYRIDYPADFIPQGES
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
DNGDGQVFLGQDGAELRVWGGYNIFQATPASALQEELRRSRENQRRVTYQAVGRDFFVVS
CCCCCEEEECCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
GYEPVRVSGAEPFGQRIFYLKTVVRPSLQAGFEFVYPASRRERYDRDVEAIARSLRLADP
CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSAARLACLLAGLILGAGIPVIAPAPALPVAQAGFRPYLNARFGYRIDYPADFIPQGES
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
DNGDGQVFLGQDGAELRVWGGYNIFQATPASALQEELRRSRENQRRVTYQAVGRDFFVVS
CCCCCEEEECCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
GYEPVRVSGAEPFGQRIFYLKTVVRPSLQAGFEFVYPASRRERYDRDVEAIARSLRLADP
CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA