Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608971

Identifier: 86608971

GI number: 86608971

Start: 1578643

End: 1579203

Strand: Reverse

Name: 86608971

Synonym: CYB_1504

Alternate gene names: NA

Gene position: 1579203-1578643 (Counterclockwise)

Preceding gene: 86608972

Following gene: 86608970

Centisome position: 51.83

GC content: 61.5

Gene sequence:

>561_bases
GTGAAGAAACCTCTGGATGATTGCCTGCTGGAGCGGATGCGGGTTGTTGGCCTGTCTTCTTGGCGGGCTTTACAGGCCCA
GGCCGGGATCAGCCGCCGCGCCCTTGATCAGGTGCGCCGAGGGAAGTGGGGATCCCTGCGCCTGGAGCAGCTCCAAAAGC
TGGCTGCCGCCCTGCAGTGGGACTTGGGATCCCTGCTGCGCCTCAACGGGAATGACAAAATGGGAGCCACCGATTCCTCA
GAAGTCCTCTTCTCTCTGCTGCAGCCGCTGCTCACCAGCTACCCCACTGTCCGCCAGATTGCCCAGCGCAAGCCCGATTG
GCCGGCCCAAAACGTGACAGCTCTGTTTCGCTCCTTAGACGCTCTGCTGCAGCACTGGGGGTATGAGTCCATTGGCAGCC
CCCTTGAATCCGTCCCCTTCGATCCGCAACGGCATCAGCCGGATCAGCCGGATATTCAGAAGGGGGATCCCGTTTACATT
CGCTTTGTCGGCTACCGCCGCGGTGACCACATCCTCTGCCCAGCCAAAGTCAGCCGTTCCCTGCCTGGAGGATTGAGCTG
A

Upstream 100 bases:

>100_bases
ACCGAGATGTGGAAGCTATAGCCCGTTCCCTGCGCCTTGCCGATCCCTGAGCTAGACCCAAGTTGGGGCATGATCGTAGG
GATCCCTGGCAAAAACGATG

Downstream 100 bases:

>100_bases
TGGCACCTGCCCCCAAAGCGACCCTAGCCATTGATTTTGGCACCAGCAACACGGTGGTGGCAGTTTGGGATCCCGCCCAA
GCAGTGCCCCGTCTCCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKPLDDCLLERMRVVGLSSWRALQAQAGISRRALDQVRRGKWGSLRLEQLQKLAAALQWDLGSLLRLNGNDKMGATDSS
EVLFSLLQPLLTSYPTVRQIAQRKPDWPAQNVTALFRSLDALLQHWGYESIGSPLESVPFDPQRHQPDQPDIQKGDPVYI
RFVGYRRGDHILCPAKVSRSLPGGLS

Sequences:

>Translated_186_residues
MKKPLDDCLLERMRVVGLSSWRALQAQAGISRRALDQVRRGKWGSLRLEQLQKLAAALQWDLGSLLRLNGNDKMGATDSS
EVLFSLLQPLLTSYPTVRQIAQRKPDWPAQNVTALFRSLDALLQHWGYESIGSPLESVPFDPQRHQPDQPDIQKGDPVYI
RFVGYRRGDHILCPAKVSRSLPGGLS
>Mature_186_residues
MKKPLDDCLLERMRVVGLSSWRALQAQAGISRRALDQVRRGKWGSLRLEQLQKLAAALQWDLGSLLRLNGNDKMGATDSS
EVLFSLLQPLLTSYPTVRQIAQRKPDWPAQNVTALFRSLDALLQHWGYESIGSPLESVPFDPQRHQPDQPDIQKGDPVYI
RFVGYRRGDHILCPAKVSRSLPGGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20910; Mature: 20910

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPLDDCLLERMRVVGLSSWRALQAQAGISRRALDQVRRGKWGSLRLEQLQKLAAALQW
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DLGSLLRLNGNDKMGATDSSEVLFSLLQPLLTSYPTVRQIAQRKPDWPAQNVTALFRSLD
HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH
ALLQHWGYESIGSPLESVPFDPQRHQPDQPDIQKGDPVYIRFVGYRRGDHILCPAKVSRS
HHHHHCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECHHHHHCC
LPGGLS
CCCCCC
>Mature Secondary Structure
MKKPLDDCLLERMRVVGLSSWRALQAQAGISRRALDQVRRGKWGSLRLEQLQKLAAALQW
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DLGSLLRLNGNDKMGATDSSEVLFSLLQPLLTSYPTVRQIAQRKPDWPAQNVTALFRSLD
HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH
ALLQHWGYESIGSPLESVPFDPQRHQPDQPDIQKGDPVYIRFVGYRRGDHILCPAKVSRS
HHHHHCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECHHHHHCC
LPGGLS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA