| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is phnE-3 [H]
Identifier: 86608937
GI number: 86608937
Start: 1544766
End: 1545578
Strand: Direct
Name: phnE-3 [H]
Synonym: CYB_1469
Alternate gene names: 86608937
Gene position: 1544766-1545578 (Clockwise)
Preceding gene: 86608936
Following gene: 86608943
Centisome position: 50.7
GC content: 54.74
Gene sequence:
>813_bases ATGCCTGTTCTGGAAAGCAGTGGGATCAAGACCTGGCAGTGGCGCAATCAAAAGCAAACTTTGCTTGAGTATGCCTTCTG GTTGGCTCTGCTGTTACTGATGTTTGCCTGCGCTAAGTTCATTGCAGACCGTACCACCTGGGGCTTTGTGCTGGATGCAC CGCGCCAGGGAAGAGAAATGCTCTCGCGGGGGGTACCGCCCCGTTGGGACTACATGTCACAGCTTTGGCGCCCCCTTTGG GATACCCTCACCATTGCCACATTGGGTACGGCCCTTTCCTTTGTGATTTCGGTGCCGGTGGCCTTTTTGGCAGCCCGCAA CACCACTCCCAATTTGCTGGTGCGCTACATCGCCCTGTTCATCATCGTCGGCACCCGTTCGGTTAACTCCCTGATTTGGG CTTTGATCCTGGTGGTTGTTCTTGGGCCAGGGGTCTTGTCCGGAACCTTAGCCATTGCCCTACGCTCTGTCGGATTTATG GGCAAGCTGATCTATGAAGGCATCGAAGAGATTAACGAAGAACCAGTAGAAGCGATCCGTTCCACGGGGGCTAGCGGTGC CCAGGTACTGAGCTATGCCATTTGGCCGCAGGTGATCACCAACATCCTCGGGGTAACAATTTACCGTTGGGATATCAATT TGCGAGAGTCTACGGTGGTTGGATTGGTCGGTGCCGGTGGAATTGGCCTACAGCTAGATGCTTCCATCAACACCCTGCGC TGGAATCAGGTGAGCATGATCCTGCTTGTGATCTTCGTTTCTGTGTTCATCAGCGAGTGGATCTCCGCCAAGGCCCGGCA AGCCCTGACTTAG
Upstream 100 bases:
>100_bases GCTACGACTATGACACGGCCTCTGCCATCATCCTTGTGATTATCGCTCTGGTGATGGTGGTGGAATTGAGTTCTGGTTGG ATTCGCAAGAGGGTGCAATA
Downstream 100 bases:
>100_bases CCCAGGGATCCGGATAGGCTACGGTGAAGGGCAGTTTGCAACAGCACAACTGTATGACTCATGACGGAAGAACTGTTTCG GGCGGAGGCCTATCTCACCA
Product: phosphonate ABC transporter, permease protein
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPVLESSGIKTWQWRNQKQTLLEYAFWLALLLLMFACAKFIADRTTWGFVLDAPRQGREMLSRGVPPRWDYMSQLWRPLW DTLTIATLGTALSFVISVPVAFLAARNTTPNLLVRYIALFIIVGTRSVNSLIWALILVVVLGPGVLSGTLAIALRSVGFM GKLIYEGIEEINEEPVEAIRSTGASGAQVLSYAIWPQVITNILGVTIYRWDINLRESTVVGLVGAGGIGLQLDASINTLR WNQVSMILLVIFVSVFISEWISAKARQALT
Sequences:
>Translated_270_residues MPVLESSGIKTWQWRNQKQTLLEYAFWLALLLLMFACAKFIADRTTWGFVLDAPRQGREMLSRGVPPRWDYMSQLWRPLW DTLTIATLGTALSFVISVPVAFLAARNTTPNLLVRYIALFIIVGTRSVNSLIWALILVVVLGPGVLSGTLAIALRSVGFM GKLIYEGIEEINEEPVEAIRSTGASGAQVLSYAIWPQVITNILGVTIYRWDINLRESTVVGLVGAGGIGLQLDASINTLR WNQVSMILLVIFVSVFISEWISAKARQALT >Mature_269_residues PVLESSGIKTWQWRNQKQTLLEYAFWLALLLLMFACAKFIADRTTWGFVLDAPRQGREMLSRGVPPRWDYMSQLWRPLWD TLTIATLGTALSFVISVPVAFLAARNTTPNLLVRYIALFIIVGTRSVNSLIWALILVVVLGPGVLSGTLAIALRSVGFMG KLIYEGIEEINEEPVEAIRSTGASGAQVLSYAIWPQVITNILGVTIYRWDINLRESTVVGLVGAGGIGLQLDASINTLRW NQVSMILLVIFVSVFISEWISAKARQALT
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29940; Mature: 29808
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLESSGIKTWQWRNQKQTLLEYAFWLALLLLMFACAKFIADRTTWGFVLDAPRQGREM CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHH LSRGVPPRWDYMSQLWRPLWDTLTIATLGTALSFVISVPVAFLAARNTTPNLLVRYIALF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IIVGTRSVNSLIWALILVVVLGPGVLSGTLAIALRSVGFMGKLIYEGIEEINEEPVEAIR HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH STGASGAQVLSYAIWPQVITNILGVTIYRWDINLRESTVVGLVGAGGIGLQLDASINTLR HCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHEEEEEECCCCCEEEECCCCCEE WNQVSMILLVIFVSVFISEWISAKARQALT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PVLESSGIKTWQWRNQKQTLLEYAFWLALLLLMFACAKFIADRTTWGFVLDAPRQGREM CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHH LSRGVPPRWDYMSQLWRPLWDTLTIATLGTALSFVISVPVAFLAARNTTPNLLVRYIALF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IIVGTRSVNSLIWALILVVVLGPGVLSGTLAIALRSVGFMGKLIYEGIEEINEEPVEAIR HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH STGASGAQVLSYAIWPQVITNILGVTIYRWDINLRESTVVGLVGAGGIGLQLDASINTLR HCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHEEEEEECCCCCEEEECCCCCEE WNQVSMILLVIFVSVFISEWISAKARQALT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]