| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is phnE-2 [H]
Identifier: 86608936
GI number: 86608936
Start: 1543957
End: 1544766
Strand: Direct
Name: phnE-2 [H]
Synonym: CYB_1468
Alternate gene names: 86608936
Gene position: 1543957-1544766 (Clockwise)
Preceding gene: 86608935
Following gene: 86608937
Centisome position: 50.68
GC content: 54.94
Gene sequence:
>810_bases ATGGCACAGGCAACGACACTGAGCGGGCGCCAATGGTCGCCACCACCTTTGATTAAAAATCCTTGGGTTCGCTGGGGACT GATTCTTGGGGCGGTCATTTACCTGATCTTTGCGCTTTCTACTCTCAATTTCGATCCAGCCCGGGTAGCCCGCGGTATGC AGCGTAGTGGCCGTCTCTTGTTGGCCTTTTTGCATCCCGATTTCACCACCCGCGGCAACTTGATTGTCACCGGGATGCTG GAAAGTGTGACCATGGCCGCCATTTCCACCGTGGCAGGATTTATTGTCGCGGTTCCGGTGGGGTTTGGGGCCGCACGCAA CTTGGTGCCAATGCCGGTCTACCTGGTTTGTCGTGGCCTGATTGCCCTGTCGCGCACCTTCCAAGAGGTGATCATCGCCA TTTTGTTTGTGGTCATGTTTGGCTTTGGGCCTTTTGCTGGAGTGCTCACCCTCACCTTTGGGAGTTTGGGTTTTTTCAGC AAGCTTTTGGCAGAAGACATCGAAGAAATTGATGCAGTACAGGTGGAGGCGATTCGCTCCACGGGGGCTTCTTGGCTCCA AATGGTCAGCTACGCGGTGGTGCCGCAGGTGTTGCCCCGCATGATCGGCTTGACTCTGTATCGTTTCGACATCAACATTC GGGAGGCGGCCATTCTGGGGATTGTCGGTGCCGGTGGGATTGGCTCTACCCTGAACACCTCCTTACGTCGCTACGACTAT GACACGGCCTCTGCCATCATCCTTGTGATTATCGCTCTGGTGATGGTGGTGGAATTGAGTTCTGGTTGGATTCGCAAGAG GGTGCAATAA
Upstream 100 bases:
>100_bases GAAGAAAACGAAGCCGTCTCGGCTGGAGTAGCCACCCACTAAGGGATCCCTTGCAGAAGTCAGTAGAAGTCAATAGAAGT CAGTAGTGCGGAGCACACCC
Downstream 100 bases:
>100_bases TGCCTGTTCTGGAAAGCAGTGGGATCAAGACCTGGCAGTGGCGCAATCAAAAGCAAACTTTGCTTGAGTATGCCTTCTGG TTGGCTCTGCTGTTACTGAT
Product: phosphonate ABC transporter, permease protein
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MAQATTLSGRQWSPPPLIKNPWVRWGLILGAVIYLIFALSTLNFDPARVARGMQRSGRLLLAFLHPDFTTRGNLIVTGML ESVTMAAISTVAGFIVAVPVGFGAARNLVPMPVYLVCRGLIALSRTFQEVIIAILFVVMFGFGPFAGVLTLTFGSLGFFS KLLAEDIEEIDAVQVEAIRSTGASWLQMVSYAVVPQVLPRMIGLTLYRFDINIREAAILGIVGAGGIGSTLNTSLRRYDY DTASAIILVIIALVMVVELSSGWIRKRVQ
Sequences:
>Translated_269_residues MAQATTLSGRQWSPPPLIKNPWVRWGLILGAVIYLIFALSTLNFDPARVARGMQRSGRLLLAFLHPDFTTRGNLIVTGML ESVTMAAISTVAGFIVAVPVGFGAARNLVPMPVYLVCRGLIALSRTFQEVIIAILFVVMFGFGPFAGVLTLTFGSLGFFS KLLAEDIEEIDAVQVEAIRSTGASWLQMVSYAVVPQVLPRMIGLTLYRFDINIREAAILGIVGAGGIGSTLNTSLRRYDY DTASAIILVIIALVMVVELSSGWIRKRVQ >Mature_268_residues AQATTLSGRQWSPPPLIKNPWVRWGLILGAVIYLIFALSTLNFDPARVARGMQRSGRLLLAFLHPDFTTRGNLIVTGMLE SVTMAAISTVAGFIVAVPVGFGAARNLVPMPVYLVCRGLIALSRTFQEVIIAILFVVMFGFGPFAGVLTLTFGSLGFFSK LLAEDIEEIDAVQVEAIRSTGASWLQMVSYAVVPQVLPRMIGLTLYRFDINIREAAILGIVGAGGIGSTLNTSLRRYDYD TASAIILVIIALVMVVELSSGWIRKRVQ
Specific function: Part of the ABC transporter complex phnCDE involved in phosphate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29192; Mature: 29061
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQATTLSGRQWSPPPLIKNPWVRWGLILGAVIYLIFALSTLNFDPARVARGMQRSGRLL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEE LAFLHPDFTTRGNLIVTGMLESVTMAAISTVAGFIVAVPVGFGAARNLVPMPVYLVCRGL EEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH IALSRTFQEVIIAILFVVMFGFGPFAGVLTLTFGSLGFFSKLLAEDIEEIDAVQVEAIRS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGASWLQMVSYAVVPQVLPRMIGLTLYRFDINIREAAILGIVGAGGIGSTLNTSLRRYDY CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHEEEEECCCCCHHHHHHHHHCCC DTASAIILVIIALVMVVELSSGWIRKRVQ CHHHHHHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure AQATTLSGRQWSPPPLIKNPWVRWGLILGAVIYLIFALSTLNFDPARVARGMQRSGRLL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEE LAFLHPDFTTRGNLIVTGMLESVTMAAISTVAGFIVAVPVGFGAARNLVPMPVYLVCRGL EEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH IALSRTFQEVIIAILFVVMFGFGPFAGVLTLTFGSLGFFSKLLAEDIEEIDAVQVEAIRS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGASWLQMVSYAVVPQVLPRMIGLTLYRFDINIREAAILGIVGAGGIGSTLNTSLRRYDY CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHEEEEECCCCCHHHHHHHHHCCC DTASAIILVIIALVMVVELSSGWIRKRVQ CHHHHHHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA