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The map label for this gene is sufB [C]

Identifier: 86608874

GI number: 86608874

Start: 1473110

End: 1474546

Strand: Reverse

Name: sufB [C]

Synonym: CYB_1405

Alternate gene names: 86608874

Gene position: 1474546-1473110 (Counterclockwise)

Preceding gene: 86608880

Following gene: 86608873

Centisome position: 48.4

GC content: 56.02

Gene sequence:

>1437_bases
ATGTCTACGAGCGTCCGCGCCCTGGTCAACCAGCCCTACAAGTACGGCTTTGTAACCGACATCCCCTCTGAGTCGATTGG
CAAAGGCTTGAACGAAGAGGTGATTCGGCAGATCTGGGCCAAGAAAGGGGAGCCGGACTTTATGCTAGAGTTCCGGCTGC
GGGCCTACCGCCAGTGGCTGAAGATGAGCGAGCCCACCTGGCCCAACGTCAGCTACCCGCCCATTGACTACCAAAACATT
GTCTACTACTCGGCCCCTAAGGTGCAGCCCAAGAAAAAGAGCCTGGACGAAGTGGATCCGGTGCTGTTGGAGACCTTCGA
GAAATTGGGGATCCCCTTGTCAGAGCAAAAGCGGCTGGCCAATGTGGCGGTGGATGCCATCTTCGACAGCGTTTCGGTAG
CCACCACCTTCCGGGAAAAGCTGGCCAAGGAAGGCGTGATCTTCTGCTCCATGTCGGAGGCACTGCGGGAGTATCCAGAG
CTGGTGCGCAAGTACTTGGGCAGTGTGGTTCCCATTGCCGATAACTACTACGCTGCGCTGAACTCGGCGGTGTTTAGCGA
TGGCTCCTTTGTCTATGTGCCCAAAGGGGTGCGCTGTCCCATGGAGCTCTCCACCTATTTCCGCATCAACAACGGCGAAT
CGGGCCAGTTTGAGCGCACCCTGATCATTGCCGACGAGGGATCCTACGTCAGCTACTTGGAAGGGTGTACTGCCCCCATG
TTCGACACCAACCAACTGCATGCGGCGGTGGTGGAGTTAATTGTCCTAGACAATGCCGAGATCAAGTACTCGACGGTGCA
GAACTGGTATGCCGGCGACGAAAACGGCAAAGGGGGCATTTACAACTTTGTAACCAAGCGCGGCCTGTGTCAGGGAGCAA
ACTCCAAGATCTCCTGGACGCAAGTGGAGACCGGCTCGGCCATCACTTGGAAATATCCTAGCTGCGTGTTGGTGGGGGAA
AACTCGGTGGGCGAGTTTTACTCGGTTGCCCTAACCAACAACTACCAGCAGGCCGATACCGGCACCAAGATGATTCACGT
GGGCCGCAACACCCGCAGCAAAATCATTTCCAAGGGCATCTCGGCTGGGCACTCCAAAAACAGCTACCGCGGCCTGGTCA
AAATCGGGCCGAAAGCAGAAGGGGCCCGCAATTTTTCCCAGTGCGATTCCATGTTGATCGGGGATCAGTGCAGCGCCAAC
ACCTTCCCCTATATCGAGGTGCAAAACAACACCGCCAAAGTGGAGCACGAAGCTTCCACCTCTAAGATTGGAGAAGAGCA
ATTGTTCTACTTCCAGTCCCGCGGCATCTCTGCGGAAGATGCTGTGTCCATGATCATCAGCGGCTTCTGCCGAGAAGTGT
TCAACCAACTGCCGATGGAGTTTGCTGTAGAAGCCGATCGGTTGCTGAGCCTGAAGTTAGAGGGATCCGTCGGCTAG

Upstream 100 bases:

>100_bases
GCTAAAGTAACCTGAGGATCAGTTAAACAACAACTCTGTTGTTTTATTTGGCCATCTGTCTTAGTCGCGTTTCTACCCTG
TCACTACCCGAGAGCCATCC

Downstream 100 bases:

>100_bases
GGGATTGTTCCCGACGTGAAGCTAAGCAGCTGGGGAGAGGCTACTGACATCAGTGGGATTTCAGGAGAGGGGTGACTCCC
AAGGCAGAGAGGTTTTGAAC

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MSTSVRALVNQPYKYGFVTDIPSESIGKGLNEEVIRQIWAKKGEPDFMLEFRLRAYRQWLKMSEPTWPNVSYPPIDYQNI
VYYSAPKVQPKKKSLDEVDPVLLETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFREKLAKEGVIFCSMSEALREYPE
LVRKYLGSVVPIADNYYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTLIIADEGSYVSYLEGCTAPM
FDTNQLHAAVVELIVLDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGANSKISWTQVETGSAITWKYPSCVLVGE
NSVGEFYSVALTNNYQQADTGTKMIHVGRNTRSKIISKGISAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSAN
TFPYIEVQNNTAKVEHEASTSKIGEEQLFYFQSRGISAEDAVSMIISGFCREVFNQLPMEFAVEADRLLSLKLEGSVG

Sequences:

>Translated_478_residues
MSTSVRALVNQPYKYGFVTDIPSESIGKGLNEEVIRQIWAKKGEPDFMLEFRLRAYRQWLKMSEPTWPNVSYPPIDYQNI
VYYSAPKVQPKKKSLDEVDPVLLETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFREKLAKEGVIFCSMSEALREYPE
LVRKYLGSVVPIADNYYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTLIIADEGSYVSYLEGCTAPM
FDTNQLHAAVVELIVLDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGANSKISWTQVETGSAITWKYPSCVLVGE
NSVGEFYSVALTNNYQQADTGTKMIHVGRNTRSKIISKGISAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSAN
TFPYIEVQNNTAKVEHEASTSKIGEEQLFYFQSRGISAEDAVSMIISGFCREVFNQLPMEFAVEADRLLSLKLEGSVG
>Mature_477_residues
STSVRALVNQPYKYGFVTDIPSESIGKGLNEEVIRQIWAKKGEPDFMLEFRLRAYRQWLKMSEPTWPNVSYPPIDYQNIV
YYSAPKVQPKKKSLDEVDPVLLETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFREKLAKEGVIFCSMSEALREYPEL
VRKYLGSVVPIADNYYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTLIIADEGSYVSYLEGCTAPMF
DTNQLHAAVVELIVLDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGANSKISWTQVETGSAITWKYPSCVLVGEN
SVGEFYSVALTNNYQQADTGTKMIHVGRNTRSKIISKGISAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSANT
FPYIEVQNNTAKVEHEASTSKIGEEQLFYFQSRGISAEDAVSMIISGFCREVFNQLPMEFAVEADRLLSLKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=64.509394572025, Blast_Score=655, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=156, Percent_Identity=29.4871794871795, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53198; Mature: 53067

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVRALVNQPYKYGFVTDIPSESIGKGLNEEVIRQIWAKKGEPDFMLEFRLRAYRQWL
CCCCHHHHHCCCCCCCEEECCCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KMSEPTWPNVSYPPIDYQNIVYYSAPKVQPKKKSLDEVDPVLLETFEKLGIPLSEQKRLA
HCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCHHHCCHHHHHHHHHHCCCHHHHHHHH
NVAVDAIFDSVSVATTFREKLAKEGVIFCSMSEALREYPELVRKYLGSVVPIADNYYAAL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
NSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTLIIADEGSYVSYLEGCTAPM
HHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCC
FDTNQLHAAVVELIVLDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGANSKISWT
CCCCHHHHHHHHHHEECCCCEEEEEHHCCCCCCCCCCCCHHHHHHHCCHHCCCCCCEEEE
QVETGSAITWKYPSCVLVGENSVGEFYSVALTNNYQQADTGTKMIHVGRNTRSKIISKGI
EEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCHHHHHHHHHH
SAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSANTFPYIEVQNNTAKVEHEAST
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCEEEECCCCEEEEECCHH
SKIGEEQLFYFQSRGISAEDAVSMIISGFCREVFNQLPMEFAVEADRLLSLKLEGSVG
HHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure 
STSVRALVNQPYKYGFVTDIPSESIGKGLNEEVIRQIWAKKGEPDFMLEFRLRAYRQWL
CCCHHHHHCCCCCCCEEECCCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KMSEPTWPNVSYPPIDYQNIVYYSAPKVQPKKKSLDEVDPVLLETFEKLGIPLSEQKRLA
HCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCHHHCCHHHHHHHHHHCCCHHHHHHHH
NVAVDAIFDSVSVATTFREKLAKEGVIFCSMSEALREYPELVRKYLGSVVPIADNYYAAL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
NSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTLIIADEGSYVSYLEGCTAPM
HHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCC
FDTNQLHAAVVELIVLDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGANSKISWT
CCCCHHHHHHHHHHEECCCCEEEEEHHCCCCCCCCCCCCHHHHHHHCCHHCCCCCCEEEE
QVETGSAITWKYPSCVLVGENSVGEFYSVALTNNYQQADTGTKMIHVGRNTRSKIISKGI
EEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCHHHHHHHHHH
SAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSANTFPYIEVQNNTAKVEHEAST
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCEEEECCCCEEEEECCHH
SKIGEEQLFYFQSRGISAEDAVSMIISGFCREVFNQLPMEFAVEADRLLSLKLEGSVG
HHCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]