| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yjgP [C]
Identifier: 86608831
GI number: 86608831
Start: 1426849
End: 1427961
Strand: Direct
Name: yjgP [C]
Synonym: CYB_1357
Alternate gene names: 86608831
Gene position: 1426849-1427961 (Clockwise)
Preceding gene: 86608830
Following gene: 86608832
Centisome position: 46.83
GC content: 61.01
Gene sequence:
>1113_bases ATGGCACGGTTGCTCACCAAGTTCTGGCTGCTGGAGCGCTATCTGTTTGGGGAGATGCTCACCCCGGTGCTGGCCGGTGT TGCGGGGGGAACCCTGCTGCTGCTGGTGGGCCGGTTGTTTACCCTGGCCGAGCGGCTGGTCGAGGGATCCGTCCCCCCCC TGACGGTGTTGCGTCTTTTGGTTTTGGATCTGCCGGAGATGGTGGTGCTGGGCATGCCCATTGCCGCCTTCTTTGCCACC ATGCTCACCTTGGGCAAGCTGAGCGGCAACAGTGAGATCACCGCTATGCGGGCAGCCGGGATCCCTTTTAGCCGGATTTT CCGACCCCTGCTGCTGGTGGGGTTGGCCATGAGCTTGAGCGCTTTTTTCATCAGCAACGTGTTGCTGCCGGCCAGCAAAC AGCAAATCCGCCAGATCGATCAGCAGGCTTTGCTGGCCCAGGCCACCACCCCGGTGCAATACGATGTCTTTTTCAAAACC GAAGACAACCTCTGGTTCTTCATCCGCCAAGTGGACCCCCGGTTGAATACCATGCAAGATGTTACGATTTTGCGGGTGGA TCCCTTGCCGGGAGGCAAATACCAGTTGGTGGAAGTGACCTTGGCCGCTCAGGCAGTGTGGAACGGACTGGAGTGGAGCC TGAGCGAAGGGGCAACCCACCTTTACGGCCCCACGGGTCTCAGCATTGCCGAGCAAACGTTTCATCGCAAGCCGTTGCAA GTTTCCCAGGATCTGGCTGCCCTGATGCAGCCGCCGGTTCCCCCCAGCGAGTTGAGCTTGCCGGAGCTGGCAGAGCGGAT TTCCCGCCTGGCCCGCTCCAATCTCAATACTCAGGCTCTGCGCACCGAGTTCCACATGCGCTTCTCCCTGCCCTTGGCCA GCTTTTTTGCCGTGCTGATTTCGCTCCCCCTGGGATCCACCACCGCGCGGCGGGTGGGACGCTACGGGGGCGTCGTCTTC GGGATCCTGTTGGTGTTTGGCTACTACGTGGTTCTGAGCGTGTCTCGCAGCTTGGGAGAAGTGGGAGCCCTTCCCCCTTG GGCGGCAGCCTGGAGCTTCAACATCTTGTTCGGCGGCATCGGACTGGTGCTGCTGGCCCGTTTCCTGCGCTAG
Upstream 100 bases:
>100_bases AAATCGATAAGCCTGGTTCAGGGCTTTTGCTGCCGATTTTTCGGCCATTGCAACTCGCCTCTCCCTTGGGGATGAGGGCG ATCCCCTTCGATTCTCAAAC
Downstream 100 bases:
>100_bases GGATCCACCCTAGAATCCGCCAGTCTCAGTTCTCAAGGATGTCTCGAAGAAGGCAGGGATCAACTTTCCTTTCTCTCTCC TCTCGCCTCGCGTAGCTCAG
Product: YjgP/YjgQ family protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; Unclassified ABC-Type Transport System Permease
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MARLLTKFWLLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVEGSVPPLTVLRLLVLDLPEMVVLGMPIAAFFAT MLTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLSAFFISNVLLPASKQQIRQIDQQALLAQATTPVQYDVFFKT EDNLWFFIRQVDPRLNTMQDVTILRVDPLPGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRKPLQ VSQDLAALMQPPVPPSELSLPELAERISRLARSNLNTQALRTEFHMRFSLPLASFFAVLISLPLGSTTARRVGRYGGVVF GILLVFGYYVVLSVSRSLGEVGALPPWAAAWSFNILFGGIGLVLLARFLR
Sequences:
>Translated_370_residues MARLLTKFWLLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVEGSVPPLTVLRLLVLDLPEMVVLGMPIAAFFAT MLTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLSAFFISNVLLPASKQQIRQIDQQALLAQATTPVQYDVFFKT EDNLWFFIRQVDPRLNTMQDVTILRVDPLPGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRKPLQ VSQDLAALMQPPVPPSELSLPELAERISRLARSNLNTQALRTEFHMRFSLPLASFFAVLISLPLGSTTARRVGRYGGVVF GILLVFGYYVVLSVSRSLGEVGALPPWAAAWSFNILFGGIGLVLLARFLR >Mature_369_residues ARLLTKFWLLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVEGSVPPLTVLRLLVLDLPEMVVLGMPIAAFFATM LTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLSAFFISNVLLPASKQQIRQIDQQALLAQATTPVQYDVFFKTE DNLWFFIRQVDPRLNTMQDVTILRVDPLPGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRKPLQV SQDLAALMQPPVPPSELSLPELAERISRLARSNLNTQALRTEFHMRFSLPLASFFAVLISLPLGSTTARRVGRYGGVVFG ILLVFGYYVVLSVSRSLGEVGALPPWAAAWSFNILFGGIGLVLLARFLR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40667; Mature: 40535
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLLTKFWLLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVEGSVPPLTVLRLL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VLDLPEMVVLGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLS HHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH AFFISNVLLPASKQQIRQIDQQALLAQATTPVQYDVFFKTEDNLWFFIRQVDPRLNTMQD HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCCCCHHC VTILRVDPLPGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRKPLQ EEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHCCCCEECCCCCCHHHHHHHCCCCCH VSQDLAALMQPPVPPSELSLPELAERISRLARSNLNTQALRTEFHMRFSLPLASFFAVLI HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCHHHHHHHHH SLPLGSTTARRVGRYGGVVFGILLVFGYYVVLSVSRSLGEVGALPPWAAAWSFNILFGGI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GLVLLARFLR HHHHHHHHHC >Mature Secondary Structure ARLLTKFWLLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVEGSVPPLTVLRLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VLDLPEMVVLGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLS HHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH AFFISNVLLPASKQQIRQIDQQALLAQATTPVQYDVFFKTEDNLWFFIRQVDPRLNTMQD HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCCCCHHC VTILRVDPLPGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRKPLQ EEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHCCCCEECCCCCCHHHHHHHCCCCCH VSQDLAALMQPPVPPSELSLPELAERISRLARSNLNTQALRTEFHMRFSLPLASFFAVLI HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCHHHHHHHHH SLPLGSTTARRVGRYGGVVFGILLVFGYYVVLSVSRSLGEVGALPPWAAAWSFNILFGGI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GLVLLARFLR HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA