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The map label for this gene is yfiK [H]

Identifier: 86608828

GI number: 86608828

Start: 1422603

End: 1423346

Strand: Direct

Name: yfiK [H]

Synonym: CYB_1354

Alternate gene names: 86608828

Gene position: 1422603-1423346 (Clockwise)

Preceding gene: 86608827

Following gene: 86608830

Centisome position: 46.69

GC content: 55.65

Gene sequence:

>744_bases
GTGAGTACCCTCCTTGCTGAAGATGACGCTCTCTACCGTCAGCATGTTCATAGCCTGCTAACACAACATTTGCCTGAGTT
CGGCCCGGTGTATATAGCCTCGAATGGTAGAGAGGCGTTGGAACTCTACCGCCAGCACCACCCCAGCTTCGTGTTGATGG
ACATTCGCATGCCTGAGATGACCGGGATCGAGGTAGCGCGGCAGGTTTGGTCAGAGTGCCCCAGCACGCGCATCATTTTT
TGGTCGCATTTTGCCGATGAAGTCTATGTGCGGGAGCTGCACAAGATCGTGCCTCCGCAAACTGTCTATGGCTACCTTTT
GAAAAATTGCACCGATGAAAAATTGGTCAGCGCCATCCAAGCGGTGGTGCAGGATGAGCAATGCGTGATCGACCGAGAGG
TGCGCGGGGTCGATTCCCGTTCACAAAACAAAATCACCGGTCTCAGCGATGCCGAGTACGAAGTGCTGATCGACATTGCC
CTCGGCCTCACCGACCAGGCCATTGCTGCACGGCGCTTTTTGTCCCGCCGAGGGGTAACCAACCGTCTGCGCAACCTCTA
CGACAAGTTAGAAGTCAGCAACGACCAAATTGAGAGCGACGAGTGGGGAACCACCTTCAGCTTGCGGGCCAGAGCCATCC
GTCTTGCCTTCAAACGGGGGTTGATCAACGCCCAACTGCTGGACGAGGAGGAAGTGCATTTGGATCACTGGCTCAGCCGC
TACCGACTGGATCCGTTGGACTAG

Upstream 100 bases:

>100_bases
CTCCTTTTGAGTACTGCTCAATAGTGCCTTGCCTTCCCTTGTGGGTGTTTTTAGAGTTAGGAAGTGAAAAGAAAGTATTC
GGTAACTCTGATAAAGGCCT

Downstream 100 bases:

>100_bases
AGAGGGGGTGTTCGAGCCGTCATCGCTCTTGGCAAGCACTTGTAGTCAATTCCCTTGCCAGCGACCAAGGAGACTTGGGC
TCAATGGCTGGCCACCCCGC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSTLLAEDDALYRQHVHSLLTQHLPEFGPVYIASNGREALELYRQHHPSFVLMDIRMPEMTGIEVARQVWSECPSTRIIF
WSHFADEVYVRELHKIVPPQTVYGYLLKNCTDEKLVSAIQAVVQDEQCVIDREVRGVDSRSQNKITGLSDAEYEVLIDIA
LGLTDQAIAARRFLSRRGVTNRLRNLYDKLEVSNDQIESDEWGTTFSLRARAIRLAFKRGLINAQLLDEEEVHLDHWLSR
YRLDPLD

Sequences:

>Translated_247_residues
MSTLLAEDDALYRQHVHSLLTQHLPEFGPVYIASNGREALELYRQHHPSFVLMDIRMPEMTGIEVARQVWSECPSTRIIF
WSHFADEVYVRELHKIVPPQTVYGYLLKNCTDEKLVSAIQAVVQDEQCVIDREVRGVDSRSQNKITGLSDAEYEVLIDIA
LGLTDQAIAARRFLSRRGVTNRLRNLYDKLEVSNDQIESDEWGTTFSLRARAIRLAFKRGLINAQLLDEEEVHLDHWLSR
YRLDPLD
>Mature_246_residues
STLLAEDDALYRQHVHSLLTQHLPEFGPVYIASNGREALELYRQHHPSFVLMDIRMPEMTGIEVARQVWSECPSTRIIFW
SHFADEVYVRELHKIVPPQTVYGYLLKNCTDEKLVSAIQAVVQDEQCVIDREVRGVDSRSQNKITGLSDAEYEVLIDIAL
GLTDQAIAARRFLSRRGVTNRLRNLYDKLEVSNDQIESDEWGTTFSLRARAIRLAFKRGLINAQLLDEEEVHLDHWLSRY
RLDPLD

Specific function: Member of the two-component regulatory system yfiJ/yfiK [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28563; Mature: 28432

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLLAEDDALYRQHVHSLLTQHLPEFGPVYIASNGREALELYRQHHPSFVLMDIRMPEM
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCH
TGIEVARQVWSECPSTRIIFWSHFADEVYVRELHKIVPPQTVYGYLLKNCTDEKLVSAIQ
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
AVVQDEQCVIDREVRGVDSRSQNKITGLSDAEYEVLIDIALGLTDQAIAARRFLSRRGVT
HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCHH
NRLRNLYDKLEVSNDQIESDEWGTTFSLRARAIRLAFKRGLINAQLLDEEEVHLDHWLSR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH
YRLDPLD
HCCCCCC
>Mature Secondary Structure 
STLLAEDDALYRQHVHSLLTQHLPEFGPVYIASNGREALELYRQHHPSFVLMDIRMPEM
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCH
TGIEVARQVWSECPSTRIIFWSHFADEVYVRELHKIVPPQTVYGYLLKNCTDEKLVSAIQ
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
AVVQDEQCVIDREVRGVDSRSQNKITGLSDAEYEVLIDIALGLTDQAIAARRFLSRRGVT
HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCHH
NRLRNLYDKLEVSNDQIESDEWGTTFSLRARAIRLAFKRGLINAQLLDEEEVHLDHWLSR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH
YRLDPLD
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]