| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608707
Identifier: 86608707
GI number: 86608707
Start: 1273448
End: 1274140
Strand: Direct
Name: 86608707
Synonym: CYB_1231
Alternate gene names: NA
Gene position: 1273448-1274140 (Clockwise)
Preceding gene: 86608704
Following gene: 86608708
Centisome position: 41.8
GC content: 60.46
Gene sequence:
>693_bases ATGCCCACTTTTGCCTCTTGCCGCCCGTGCACCTGGGCAGTAAAACCAGGGTGGGAGGGTGTGTGGCAGATGAATATCGC GGTCTTGGGGTTCAAAGGGGGCGTGGGCAAAACCACCACAGCGGTGCATTTGGCCCTCTACCTTCAGCAAAAACAAGGGG CAGCTCCTGCGGGTGGGTCGGGGATGGCCCTGTTGATCGACGCCGATCCCAATCGCTCGGCCTCTCGCTGGGCAGAACGG GGATCATCCTTTCCTATCAAGGTATTGGCCGGGGATCCCACCACTCCCACGCCCACAGGCTTTCAGCACACGGTGATCGA CACCCCTGCCCGTCCCACCCCGGAACAGTTACACGCTCTGGCGCAGCGGTGTGATCTGCTGCTTTTGCCCTGTTCCCCGG ATGCCTTGGCTCTAGATGCCTTGATGCTGACCGCCAAGGCCCTAGACCGGTTGGGGGCAAAGCACTACAAGGTCTTGCTG ACGCTGGTTCCCCCCTGGCCCAACCGAGATGGAGCGGAGGCCCGCAACTTTCTCAAGCAAGTCGGGATTCCTCTCTGCCA CCATTCCATTCGCCGCACGGTGGCTTTTCAACGGGCTGCTCTGGAGGGGGTCTGTGTTCACGAGATCCCAGAGCCGAGAG CCAAACAAGCTTGGTCAGACTACGTTGCTGTGGGGGAGGAAATCTCGTCATGA
Upstream 100 bases:
>100_bases TTATGCCAGCCAAGGATATCCTACCGGCGAAGCCTAAAGATTGCGCAACCGGGAGAACTTCTCCCCGCGGCCGGCTCTCC CGAGTTGCCCCAAGACCCCA
Downstream 100 bases:
>100_bases GCAAGTTTGAGCGCCTTCTCGACCGGCAGCCAGAGGGGATCCCGGCCCGACCCGCCCCGAAAAAGCTGAGCGCCCAAGCC TACAAGATTCCAGAACCCAA
Product: partition protein A
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPTFASCRPCTWAVKPGWEGVWQMNIAVLGFKGGVGKTTTAVHLALYLQQKQGAAPAGGSGMALLIDADPNRSASRWAER GSSFPIKVLAGDPTTPTPTGFQHTVIDTPARPTPEQLHALAQRCDLLLLPCSPDALALDALMLTAKALDRLGAKHYKVLL TLVPPWPNRDGAEARNFLKQVGIPLCHHSIRRTVAFQRAALEGVCVHEIPEPRAKQAWSDYVAVGEEISS
Sequences:
>Translated_230_residues MPTFASCRPCTWAVKPGWEGVWQMNIAVLGFKGGVGKTTTAVHLALYLQQKQGAAPAGGSGMALLIDADPNRSASRWAER GSSFPIKVLAGDPTTPTPTGFQHTVIDTPARPTPEQLHALAQRCDLLLLPCSPDALALDALMLTAKALDRLGAKHYKVLL TLVPPWPNRDGAEARNFLKQVGIPLCHHSIRRTVAFQRAALEGVCVHEIPEPRAKQAWSDYVAVGEEISS >Mature_229_residues PTFASCRPCTWAVKPGWEGVWQMNIAVLGFKGGVGKTTTAVHLALYLQQKQGAAPAGGSGMALLIDADPNRSASRWAERG SSFPIKVLAGDPTTPTPTGFQHTVIDTPARPTPEQLHALAQRCDLLLLPCSPDALALDALMLTAKALDRLGAKHYKVLLT LVPPWPNRDGAEARNFLKQVGIPLCHHSIRRTVAFQRAALEGVCVHEIPEPRAKQAWSDYVAVGEEISS
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24772; Mature: 24641
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFASCRPCTWAVKPGWEGVWQMNIAVLGFKGGVGKTTTAVHLALYLQQKQGAAPAGGS CCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC GMALLIDADPNRSASRWAERGSSFPIKVLAGDPTTPTPTGFQHTVIDTPARPTPEQLHAL CEEEEEECCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHH AQRCDLLLLPCSPDALALDALMLTAKALDRLGAKHYKVLLTLVPPWPNRDGAEARNFLKQ HHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHH VGIPLCHHSIRRTVAFQRAALEGVCVHEIPEPRAKQAWSDYVAVGEEISS HCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTFASCRPCTWAVKPGWEGVWQMNIAVLGFKGGVGKTTTAVHLALYLQQKQGAAPAGGS CCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC GMALLIDADPNRSASRWAERGSSFPIKVLAGDPTTPTPTGFQHTVIDTPARPTPEQLHAL CEEEEEECCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHH AQRCDLLLLPCSPDALALDALMLTAKALDRLGAKHYKVLLTLVPPWPNRDGAEARNFLKQ HHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHH VGIPLCHHSIRRTVAFQRAALEGVCVHEIPEPRAKQAWSDYVAVGEEISS HCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA