| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608704
Identifier: 86608704
GI number: 86608704
Start: 1270032
End: 1271426
Strand: Direct
Name: 86608704
Synonym: CYB_1228
Alternate gene names: NA
Gene position: 1270032-1271426 (Clockwise)
Preceding gene: 86608702
Following gene: 86608707
Centisome position: 41.69
GC content: 59.71
Gene sequence:
>1395_bases GTGGGCTTCTGTTGGCATGTGGCTGTGAGGAAAGGTGGAAAGGTGCAAAACGAATTGAACCCCGCTCGAGATCCTTGTAG CGCAGGGATCCCGGCCCAACCTACTGCAGAGTCCACCTCCCCCAAACCAGAACCGGCTGCTGAGAGCCGGCCAAACCAAC TGACGGATCCAGATCCTCGCCTCAGCTGTTCTCAACAAAAACGAGAGCAGGAACGCCGCTCCTTACCTTGGCGTCTGGGG CTGGCCAACGTGCTCTCGGCAGGGTTGCATTTCATCGCGATGAGCTGGGTGGGTTGGCAGCCTAGGATCCGGGAAGAGGA GGAGATAATCTCCTTTCAGTGGGTGGAGATGGCGGATGAGCCGCCCCCAGAGCCGCAGTGGATTGCGCCCGTCTCCGCCC GTGAGTCCGGTGTCTCTGAACCTCGGGATCACGTATCGGTGCGGCAGTCGCAAGTGCCCAGCCCAAGTGAAGAGGCCACT TCTGCGGCGGCACAGCCTTTGGTTGCCTCAGCCGCAGGGAGTCCTGTCCCTGGGATCCTCCCCCCATCCCCAAGGGAGCT TGAGATGCCCCAACCCAACCGCGACTCTGCCTCTCCTCAGCAGCAGCCAAAGGCCAGGTTAGAAAATCTGTCAGCGGGTT TAGCAGCTCTGGAGCAGGCAGTTGCCGATCACAATTGGGCGGAGGCGCTACATCTGACGGAAGAATGGCTGGATCACTGG CCTCTGTCCTCTCCACAGCGCCAGCAACTGCAGGACTATCGTCAGCATCTGCAAAGCCTACTGGCTACCTCCTCGGCAGC AGCAGTGGAGACCAAATCGGCTCAGATCTCTCCTGCTCAATCCCTCAAGCCTCAACCCGAAAGAGCAGCAAGTTCTCCTG AGGTTTTGCCACAACCCTACCTGTCGGCTCCAGCGGATCCGCATCCAACTTTGCCCTCTCCAGAGCCGATCGCAGCCCCG TTGGAAGAGCCTTCTCCCACCTTGCCCCCGACTTTTCCTACCAGATCCCACAGCTCCAGCCTTGGTCGCACCAGTGGGAT AGAGTCCTCGCGGGCAGGCCCACCCAGCCTAAATGCCACCGCCGATCCGGATTGGGGAGACTACTTGGCTCAATTCCAAG AAAGGGTTCGCCAACACTGGATGGTACGGCGGGCATCCGGCTCCTACGTAACAGTGGTGCAGGTGCGTCTGGATCGACAG GGATCCCTGCGGGAACTGCGCCTGCAAACCCCCTCAGAAGATCCCCTGTTGGATGCAGCCGTGCTCAGTGCCATCCAGCG CTCAGCCCCCTTTGCTCCTTTGCCCGAGAGCTATGTTGGCGAAGAACTGATGCTGGAAATTAACGTGTTGAGCGGATCCC TGCAGGCTGGCTCAACCCAGAATCCGAGAAACTAA
Upstream 100 bases:
>100_bases GTATAAGCCAACACAGCTTTGCCCTGGGCGCGTTTGTGCATCGATGGCTACCCCCCTGCCCGGGGATGGGCTATTGATCG AAGGAAGCAGAGAAGCGTCG
Downstream 100 bases:
>100_bases CGTCAGAACCTCAGGCAAGGCCACAAGCCCTGTTCAGAGGGGTTCAGATTTCCGAGTGTCGGCAATGGCCTAGGCCATAG ATTTGCGGCGGTTGCGCCGG
Product: TonB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MGFCWHVAVRKGGKVQNELNPARDPCSAGIPAQPTAESTSPKPEPAAESRPNQLTDPDPRLSCSQQKREQERRSLPWRLG LANVLSAGLHFIAMSWVGWQPRIREEEEIISFQWVEMADEPPPEPQWIAPVSARESGVSEPRDHVSVRQSQVPSPSEEAT SAAAQPLVASAAGSPVPGILPPSPRELEMPQPNRDSASPQQQPKARLENLSAGLAALEQAVADHNWAEALHLTEEWLDHW PLSSPQRQQLQDYRQHLQSLLATSSAAAVETKSAQISPAQSLKPQPERAASSPEVLPQPYLSAPADPHPTLPSPEPIAAP LEEPSPTLPPTFPTRSHSSSLGRTSGIESSRAGPPSLNATADPDWGDYLAQFQERVRQHWMVRRASGSYVTVVQVRLDRQ GSLRELRLQTPSEDPLLDAAVLSAIQRSAPFAPLPESYVGEELMLEINVLSGSLQAGSTQNPRN
Sequences:
>Translated_464_residues MGFCWHVAVRKGGKVQNELNPARDPCSAGIPAQPTAESTSPKPEPAAESRPNQLTDPDPRLSCSQQKREQERRSLPWRLG LANVLSAGLHFIAMSWVGWQPRIREEEEIISFQWVEMADEPPPEPQWIAPVSARESGVSEPRDHVSVRQSQVPSPSEEAT SAAAQPLVASAAGSPVPGILPPSPRELEMPQPNRDSASPQQQPKARLENLSAGLAALEQAVADHNWAEALHLTEEWLDHW PLSSPQRQQLQDYRQHLQSLLATSSAAAVETKSAQISPAQSLKPQPERAASSPEVLPQPYLSAPADPHPTLPSPEPIAAP LEEPSPTLPPTFPTRSHSSSLGRTSGIESSRAGPPSLNATADPDWGDYLAQFQERVRQHWMVRRASGSYVTVVQVRLDRQ GSLRELRLQTPSEDPLLDAAVLSAIQRSAPFAPLPESYVGEELMLEINVLSGSLQAGSTQNPRN >Mature_463_residues GFCWHVAVRKGGKVQNELNPARDPCSAGIPAQPTAESTSPKPEPAAESRPNQLTDPDPRLSCSQQKREQERRSLPWRLGL ANVLSAGLHFIAMSWVGWQPRIREEEEIISFQWVEMADEPPPEPQWIAPVSARESGVSEPRDHVSVRQSQVPSPSEEATS AAAQPLVASAAGSPVPGILPPSPRELEMPQPNRDSASPQQQPKARLENLSAGLAALEQAVADHNWAEALHLTEEWLDHWP LSSPQRQQLQDYRQHLQSLLATSSAAAVETKSAQISPAQSLKPQPERAASSPEVLPQPYLSAPADPHPTLPSPEPIAAPL EEPSPTLPPTFPTRSHSSSLGRTSGIESSRAGPPSLNATADPDWGDYLAQFQERVRQHWMVRRASGSYVTVVQVRLDRQG SLRELRLQTPSEDPLLDAAVLSAIQRSAPFAPLPESYVGEELMLEINVLSGSLQAGSTQNPRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50534; Mature: 50402
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFCWHVAVRKGGKVQNELNPARDPCSAGIPAQPTAESTSPKPEPAAESRPNQLTDPDPR CCEEEEEHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LSCSQQKREQERRSLPWRLGLANVLSAGLHFIAMSWVGWQPRIREEEEIISFQWVEMADE CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC PPPEPQWIAPVSARESGVSEPRDHVSVRQSQVPSPSEEATSAAAQPLVASAAGSPVPGIL CCCCCCEECCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC PPSPRELEMPQPNRDSASPQQQPKARLENLSAGLAALEQAVADHNWAEALHLTEEWLDHW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC PLSSPQRQQLQDYRQHLQSLLATSSAAAVETKSAQISPAQSLKPQPERAASSPEVLPQPY CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCC LSAPADPHPTLPSPEPIAAPLEEPSPTLPPTFPTRSHSSSLGRTSGIESSRAGPPSLNAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPDWGDYLAQFQERVRQHWMVRRASGSYVTVVQVRLDRQGSLRELRLQTPSEDPLLDAA CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCHHHHH VLSAIQRSAPFAPLPESYVGEELMLEINVLSGSLQAGSTQNPRN HHHHHHHCCCCCCCCHHHCCCEEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure GFCWHVAVRKGGKVQNELNPARDPCSAGIPAQPTAESTSPKPEPAAESRPNQLTDPDPR CEEEEEHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LSCSQQKREQERRSLPWRLGLANVLSAGLHFIAMSWVGWQPRIREEEEIISFQWVEMADE CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC PPPEPQWIAPVSARESGVSEPRDHVSVRQSQVPSPSEEATSAAAQPLVASAAGSPVPGIL CCCCCCEECCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC PPSPRELEMPQPNRDSASPQQQPKARLENLSAGLAALEQAVADHNWAEALHLTEEWLDHW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC PLSSPQRQQLQDYRQHLQSLLATSSAAAVETKSAQISPAQSLKPQPERAASSPEVLPQPY CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCC LSAPADPHPTLPSPEPIAAPLEEPSPTLPPTFPTRSHSSSLGRTSGIESSRAGPPSLNAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPDWGDYLAQFQERVRQHWMVRRASGSYVTVVQVRLDRQGSLRELRLQTPSEDPLLDAA CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCHHHHH VLSAIQRSAPFAPLPESYVGEELMLEINVLSGSLQAGSTQNPRN HHHHHHHCCCCCCCCHHHCCCEEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA