Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608681

Identifier: 86608681

GI number: 86608681

Start: 1248215

End: 1248994

Strand: Reverse

Name: 86608681

Synonym: CYB_1205

Alternate gene names: NA

Gene position: 1248994-1248215 (Counterclockwise)

Preceding gene: 86608682

Following gene: 86608679

Centisome position: 41.0

GC content: 60.13

Gene sequence:

>780_bases
ATGCCGGTGATACACCTGTTTTGGGCTGAACTAAAGCGGGCCTGGATCCAGTACATTCGCTATCCGGCGGAGGCCCTGGG
CGGGATCCTGATCACCACGTTCTTCTTCTATGCCCTCTTTGCCGGCGCCCAATATGTGGCAGGGCCTGCCTCCCAATTTG
GCAAACGGCTGGACGCGGTGGTGATCGGCTATGTGCTCTGGACGCTGGTCATTTTTGTGGTGAACGACATCGCCCTCAAC
CTGCAGGTGGAAGCCCAGACAGGCACCTTGGAGCAGGTGTTGCTCTCGCCATTTTCGGCAGCCACTCTCTTCTTGGCACG
GGCTTGTGCCAGCTTGGTGTTGCGCTTTTCCATTGTCGTCGTCATTCTGGGCGTCATCTTATTGCTGACGGGCAGCCGGT
TGCGGTTTCCCCCTGCTCTGGTGTTGCCTTTGGTGAGCGTGGTGCTGGGGGCCTACGGCTTCTCGTTTTTGCTGGGATCC
GCCGCTCTGATTTGGAAGCGAATTCAGCAGCTTTTGATCATCAGCCAATTCGGCCTGCTTTTCCTGTTGGCTGCTCCCAC
GGAAGAATGGCCGGGATCCCTGAGGTGGCTAGGGCAAAGTCTGCCCATGACGGCGGGGGCTGGGCTGCTGCGAGACGTGA
TGGTGCGGGAGGCGGGCTTGGATCCCGTGCGGCTGATCATGGCTCTGACCAGCGGCGTTTTCTACTTCGGCCTGGGCTTG
CTGACCTTTCGCCGGGCGGTTCGGGCAGCCAAGCGCCGAGGGATCCTGGGATCCCAGTAG

Upstream 100 bases:

>100_bases
AGATCTTGAAGCCTTTGCCCTTGCTCAGCCTCAAACGAGAGGAAGCCGATCTCACCCATATTTTCCTCGAGTTGTTGAAA
AGGGGAGAGGGGCAAGGATG

Downstream 100 bases:

>100_bases
AGGTCTGCAGGAGGGCATCTAGAGCGAACGTTGGTTGGGGGAGCGGTGCAGCAGGTGAGGGAAGTGGTATTCTACCGCTC
CAGTGACCGGGTTGTTTTCG

Product: ABC-2 type transporter, permease protein

Products: NA

Alternate protein names: ABC-2 Type Transporter Superfamily; ABC Polysaccharide/Polyol Phosphate Transporter; ABC Transporter Permease; ABC-2 Type Transporter Permease Protein; ABC-Type Transport System Permease Protein

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPVIHLFWAELKRAWIQYIRYPAEALGGILITTFFFYALFAGAQYVAGPASQFGKRLDAVVIGYVLWTLVIFVVNDIALN
LQVEAQTGTLEQVLLSPFSAATLFLARACASLVLRFSIVVVILGVILLLTGSRLRFPPALVLPLVSVVLGAYGFSFLLGS
AALIWKRIQQLLIISQFGLLFLLAAPTEEWPGSLRWLGQSLPMTAGAGLLRDVMVREAGLDPVRLIMALTSGVFYFGLGL
LTFRRAVRAAKRRGILGSQ

Sequences:

>Translated_259_residues
MPVIHLFWAELKRAWIQYIRYPAEALGGILITTFFFYALFAGAQYVAGPASQFGKRLDAVVIGYVLWTLVIFVVNDIALN
LQVEAQTGTLEQVLLSPFSAATLFLARACASLVLRFSIVVVILGVILLLTGSRLRFPPALVLPLVSVVLGAYGFSFLLGS
AALIWKRIQQLLIISQFGLLFLLAAPTEEWPGSLRWLGQSLPMTAGAGLLRDVMVREAGLDPVRLIMALTSGVFYFGLGL
LTFRRAVRAAKRRGILGSQ
>Mature_258_residues
PVIHLFWAELKRAWIQYIRYPAEALGGILITTFFFYALFAGAQYVAGPASQFGKRLDAVVIGYVLWTLVIFVVNDIALNL
QVEAQTGTLEQVLLSPFSAATLFLARACASLVLRFSIVVVILGVILLLTGSRLRFPPALVLPLVSVVLGAYGFSFLLGSA
ALIWKRIQQLLIISQFGLLFLLAAPTEEWPGSLRWLGQSLPMTAGAGLLRDVMVREAGLDPVRLIMALTSGVFYFGLGLL
TFRRAVRAAKRRGILGSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28327; Mature: 28196

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIHLFWAELKRAWIQYIRYPAEALGGILITTFFFYALFAGAQYVAGPASQFGKRLDAV
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH
VIGYVLWTLVIFVVNDIALNLQVEAQTGTLEQVLLSPFSAATLFLARACASLVLRFSIVV
HHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VILGVILLLTGSRLRFPPALVLPLVSVVLGAYGFSFLLGSAALIWKRIQQLLIISQFGLL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLAAPTEEWPGSLRWLGQSLPMTAGAGLLRDVMVREAGLDPVRLIMALTSGVFYFGLGL
HHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LTFRRAVRAAKRRGILGSQ
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PVIHLFWAELKRAWIQYIRYPAEALGGILITTFFFYALFAGAQYVAGPASQFGKRLDAV
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH
VIGYVLWTLVIFVVNDIALNLQVEAQTGTLEQVLLSPFSAATLFLARACASLVLRFSIVV
HHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VILGVILLLTGSRLRFPPALVLPLVSVVLGAYGFSFLLGSAALIWKRIQQLLIISQFGLL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLAAPTEEWPGSLRWLGQSLPMTAGAGLLRDVMVREAGLDPVRLIMALTSGVFYFGLGL
HHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LTFRRAVRAAKRRGILGSQ
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA