| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608668
Identifier: 86608668
GI number: 86608668
Start: 1230694
End: 1231359
Strand: Reverse
Name: 86608668
Synonym: CYB_1192
Alternate gene names: NA
Gene position: 1231359-1230694 (Counterclockwise)
Preceding gene: 86608669
Following gene: 86608665
Centisome position: 40.42
GC content: 58.26
Gene sequence:
>666_bases ATGCAGAATGTTACCCTCAACCCCTTCTCCCTTTTGCAGCGCTCGCTGGAACTGGTAGGCCCTATCTATGGGCCGCTGCT GATCCTGGCTTCTCCTGGCTTTGTCATTCCCATCGTTGCGGAGCTGATCCCGCTTGCCGGGGGGATCCTCAACTTGGCCT ATGGCCTGATTGGTGCGCCCATCCTGGCCGGGGCAGCCTTCTGGTTGGTGGATCAGCACTTGAAGCAGCGAACTCCCCCG CTGGGCAACAGCCTGGATCGGGCTGTCTCTAGGGCAGTGCCTCTGGTATTCGGCAGCATTCTGCTGGTGTTGATTGTCTC GCTGGGGATGCTGTTGTTTGTGCTTCCCGGAATCTACTGGGGGGTGAGGCTAGCTTTTACCCTCTACGCGATTGTCCTGG AAGACAAAGGTGCCACGGAAGGGTTGGGCTACAGTTGGAACCTCGTCAGGGGCCGTTGGTGGGGGGTGTTTTGGGCATTT CTGGCCGTGGGTTTGATCTTCGGCATCGCGATCCTGATTTCGTTTTCTGTTGGGGGGATCCTGGGAGATACCCTAGGTGC GGCTGTGGTTGGGAATGCTGCCGCCACGGCAGTTGCGCCTATCCTCAATATCTATACAGTGCTCCTGTTCCGATCCCTGC AGCAGCTGCAAGCGCAAGCAGCGTAG
Upstream 100 bases:
>100_bases CAAAGCAATACAGACTTTCTTAAGCCTGCTCCCAGAACCAAAGCCGGGATCCCGTGGTATGAAGGGGGTGAACTTGGTCG CCCACGAGGATCCCTCTGTT
Downstream 100 bases:
>100_bases TTTGGCTTGCCCTCACCCCCAATCCTTCCCCCCTGGCGAGAGGGAAGTTGCAGTTGGCCTAGGGAGAAGGGCGCTCCAGG ATCCCTCCCCCCAGCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQNVTLNPFSLLQRSLELVGPIYGPLLILASPGFVIPIVAELIPLAGGILNLAYGLIGAPILAGAAFWLVDQHLKQRTPP LGNSLDRAVSRAVPLVFGSILLVLIVSLGMLLFVLPGIYWGVRLAFTLYAIVLEDKGATEGLGYSWNLVRGRWWGVFWAF LAVGLIFGIAILISFSVGGILGDTLGAAVVGNAAATAVAPILNIYTVLLFRSLQQLQAQAA
Sequences:
>Translated_221_residues MQNVTLNPFSLLQRSLELVGPIYGPLLILASPGFVIPIVAELIPLAGGILNLAYGLIGAPILAGAAFWLVDQHLKQRTPP LGNSLDRAVSRAVPLVFGSILLVLIVSLGMLLFVLPGIYWGVRLAFTLYAIVLEDKGATEGLGYSWNLVRGRWWGVFWAF LAVGLIFGIAILISFSVGGILGDTLGAAVVGNAAATAVAPILNIYTVLLFRSLQQLQAQAA >Mature_221_residues MQNVTLNPFSLLQRSLELVGPIYGPLLILASPGFVIPIVAELIPLAGGILNLAYGLIGAPILAGAAFWLVDQHLKQRTPP LGNSLDRAVSRAVPLVFGSILLVLIVSLGMLLFVLPGIYWGVRLAFTLYAIVLEDKGATEGLGYSWNLVRGRWWGVFWAF LAVGLIFGIAILISFSVGGILGDTLGAAVVGNAAATAVAPILNIYTVLLFRSLQQLQAQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23416; Mature: 23416
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNVTLNPFSLLQRSLELVGPIYGPLLILASPGFVIPIVAELIPLAGGILNLAYGLIGAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAGAAFWLVDQHLKQRTPPLGNSLDRAVSRAVPLVFGSILLVLIVSLGMLLFVLPGIYW HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVRLAFTLYAIVLEDKGATEGLGYSWNLVRGRWWGVFWAFLAVGLIFGIAILISFSVGGI HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDTLGAAVVGNAAATAVAPILNIYTVLLFRSLQQLQAQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQNVTLNPFSLLQRSLELVGPIYGPLLILASPGFVIPIVAELIPLAGGILNLAYGLIGAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAGAAFWLVDQHLKQRTPPLGNSLDRAVSRAVPLVFGSILLVLIVSLGMLLFVLPGIYW HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVRLAFTLYAIVLEDKGATEGLGYSWNLVRGRWWGVFWAFLAVGLIFGIAILISFSVGGI HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDTLGAAVVGNAAATAVAPILNIYTVLLFRSLQQLQAQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA