Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608665

Identifier: 86608665

GI number: 86608665

Start: 1227223

End: 1228095

Strand: Reverse

Name: 86608665

Synonym: CYB_1189

Alternate gene names: NA

Gene position: 1228095-1227223 (Counterclockwise)

Preceding gene: 86608668

Following gene: 86608663

Centisome position: 40.31

GC content: 64.72

Gene sequence:

>873_bases
TTGGCCCCCCGTTGGTTCCCGGCTCTGGCCAACGAACAGGCTGTTCCTGAGGCCGAACTGGCGCTTCGGCCCCTCTTGCC
TCCGGGATCCCGGATCCTCAGCTCGCGGCGATTGAGCGACACAGAAGCGGAAATTTGGGTGGAGTCTCGGGGGGGAACCA
GCCCTGTGATCATGCGGCTGAATGCTGCAGGGACTTGGGAACAGGATATGAGCGCCACCTTGGCCCGCGGAGCCAGCCAG
ATGCAAGCTCTCGCCCGGCAACAAACGGTGAACTTGCCTGCCGGTTTTGGCCAGACCGCCCCCGATCAACCCCCGCCGCC
GGTGCCCTCCCTTCTGCAGTCCCTCCCCCGGCTCCTCAGGCCCCTCCCCGATCAACCCCCGCCGCCGGTGCCCTCCCTTC
TGCAGGCTACCCAAGCTGCCTCTAGCCTGATCCCGCCAGTGGATCGAGAGCAGGAAACCCAGCGGGCCTTGAGTGGGGCT
GGCCGTGTGGATCCCTTTGTGCCTCAAAACGTGCGTGCTCCTGAACCGCAGATTGTCCTGCCGCCCCTGCCTCCACCTCC
GGTTTTGCCCCCTCCTGGCGACGGCAATGGAGCGCCTGTAGCAGTGGCCACCCCGATCCCAACGCCTACCCCCGACCCGG
CTGCCTTTGCCCGCAGTGTACAGGTTTCCGGGATGATACAGATCGGCGGCGAGTCCTTTGCTCTGGTTTCTGGCCCAGGT
GTCATTCCCGCTGTGGTGCAGGCCGGGCAAAACTACCAAACCGCCAAGGTGGCCGGAGTATCGGTGCCAGAGCGACGGGT
TGTGCTCTCGGAAGGGGGAGAAACGGTCGTGAAGCAAATGGAAGACACCAGCGTGATTGTAGGTGCGCCCTAG

Upstream 100 bases:

>100_bases
TCATGCTCTCCCGGTGGTCTCTATGCTGAAATCGCTGCCTGCTCGCCCATTGTCCTGCTTTCTTGTAGCCGGCCTGCTGT
TGGCAGGGGGCGTTGCGTTT

Downstream 100 bases:

>100_bases
CTTCAGCAGCAGCAAGACACCGACGGTAGAACGGGCTTATTCCAAGTAGCAGCCAACTAGCAGTAAAACAGTTGGCTGGC
TTGATTCCCAACTCCCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAPRWFPALANEQAVPEAELALRPLLPPGSRILSSRRLSDTEAEIWVESRGGTSPVIMRLNAAGTWEQDMSATLARGASQ
MQALARQQTVNLPAGFGQTAPDQPPPPVPSLLQSLPRLLRPLPDQPPPPVPSLLQATQAASSLIPPVDREQETQRALSGA
GRVDPFVPQNVRAPEPQIVLPPLPPPPVLPPPGDGNGAPVAVATPIPTPTPDPAAFARSVQVSGMIQIGGESFALVSGPG
VIPAVVQAGQNYQTAKVAGVSVPERRVVLSEGGETVVKQMEDTSVIVGAP

Sequences:

>Translated_290_residues
MAPRWFPALANEQAVPEAELALRPLLPPGSRILSSRRLSDTEAEIWVESRGGTSPVIMRLNAAGTWEQDMSATLARGASQ
MQALARQQTVNLPAGFGQTAPDQPPPPVPSLLQSLPRLLRPLPDQPPPPVPSLLQATQAASSLIPPVDREQETQRALSGA
GRVDPFVPQNVRAPEPQIVLPPLPPPPVLPPPGDGNGAPVAVATPIPTPTPDPAAFARSVQVSGMIQIGGESFALVSGPG
VIPAVVQAGQNYQTAKVAGVSVPERRVVLSEGGETVVKQMEDTSVIVGAP
>Mature_289_residues
APRWFPALANEQAVPEAELALRPLLPPGSRILSSRRLSDTEAEIWVESRGGTSPVIMRLNAAGTWEQDMSATLARGASQM
QALARQQTVNLPAGFGQTAPDQPPPPVPSLLQSLPRLLRPLPDQPPPPVPSLLQATQAASSLIPPVDREQETQRALSGAG
RVDPFVPQNVRAPEPQIVLPPLPPPPVLPPPGDGNGAPVAVATPIPTPTPDPAAFARSVQVSGMIQIGGESFALVSGPGV
IPAVVQAGQNYQTAKVAGVSVPERRVVLSEGGETVVKQMEDTSVIVGAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30236; Mature: 30105

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRWFPALANEQAVPEAELALRPLLPPGSRILSSRRLSDTEAEIWVESRGGTSPVIMRL
CCCCCCCHHCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEE
NAAGTWEQDMSATLARGASQMQALARQQTVNLPAGFGQTAPDQPPPPVPSLLQSLPRLLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
PLPDQPPPPVPSLLQATQAASSLIPPVDREQETQRALSGAGRVDPFVPQNVRAPEPQIVL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
PPLPPPPVLPPPGDGNGAPVAVATPIPTPTPDPAAFARSVQVSGMIQIGGESFALVSGPG
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHEEEEEEEECCCEEEEEECCC
VIPAVVQAGQNYQTAKVAGVSVPERRVVLSEGGETVVKQMEDTSVIVGAP
HHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
APRWFPALANEQAVPEAELALRPLLPPGSRILSSRRLSDTEAEIWVESRGGTSPVIMRL
CCCCCCHHCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEE
NAAGTWEQDMSATLARGASQMQALARQQTVNLPAGFGQTAPDQPPPPVPSLLQSLPRLLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
PLPDQPPPPVPSLLQATQAASSLIPPVDREQETQRALSGAGRVDPFVPQNVRAPEPQIVL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
PPLPPPPVLPPPGDGNGAPVAVATPIPTPTPDPAAFARSVQVSGMIQIGGESFALVSGPG
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHEEEEEEEECCCEEEEEECCC
VIPAVVQAGQNYQTAKVAGVSVPERRVVLSEGGETVVKQMEDTSVIVGAP
HHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA