Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608617

Identifier: 86608617

GI number: 86608617

Start: 1175391

End: 1176530

Strand: Direct

Name: 86608617

Synonym: CYB_1139

Alternate gene names: NA

Gene position: 1175391-1176530 (Clockwise)

Preceding gene: 86608614

Following gene: 86608619

Centisome position: 38.58

GC content: 63.95

Gene sequence:

>1140_bases
ATGACCAGCATCTGGATTGAGCAGCGCCGCCGCGAGGATGAATCTCGCAACTTTTTTTGGATGGTGGCGCTGTCGCTGCT
GCTGCACGTGCTGGTGCTGCTGGGATTGCTCCACTTGGGGCGGCTTTGGCTCACTCGCGAGCCAGAACAAGAAGCCATTG
AGTTTATCCTTCTGGATCCAGAAGATCTGCAGCCCCCAGAGGAAGCAGATCTGGTTTCAGAAGTTGATTCCCGCGATGGG
GGTGAGCGGGTAGAAGCCCCTCCGTCTCAAGGCAGTCCACCTCAATCTCAGGCCGCCCCTCCCCAGGAGGCCCCTCCGCC
GCCGCCGCCAAGACCCCAACCACCGCCACCGCCTGCCCCTGTTCCACCACCACCTGCCCCGGCTGCAGTTGCCCTGGCAA
CCCCAACTCCAACCCCTCCACCCAAGCCCACGCCTACCCCAACCCCCGCTCCCCCTCAGCCCACCGCGACCCCGACTGCG
GCACCGCCCCCTCCCACGCCTGTCCCCAGACCTACTCCGACCCAAACTCCACCGCCTGTGGCGGCTGCTCCCTCCCCAAG
GCCCACTCCCCCGCCAACTGCGGAGCCCTTGCCCATACAGCCAAGCGAGCGGGTTTCGGATCCCAGCCAATTGGCTCCCG
TTCCGCCCGCTCCGCAACCGGTGACAGAGGTTCTTCCCGCCCAGCGGCCCTCTGATTCTTCCCAGTTGGGACCTCCGGTC
AGTGCTTCTGCTCCCAGCAATGGAGCCGGGATCCAGGGCAGTGGAGCCAGTGGATTGGCCAACCCCACCCAATCCGCTCC
CAATCCCCCCAGTGTGGCAGCGCGGGCCGATGTGGATTGGGGCCCCTGGCTGGCCGCTTTGCAGCGGAAAGTGGAGCAAA
ATTGGATCCCTGGGCAGACCGGTACCTCGCGCCGCACAGTGGTGATCTTTACAGTGGGTCGAGCTGGCGATCTGCAGAGC
ATTCGCCTGGGGCGCACGTCCGGCAGCCAACAAACAGACGATGCGGCGCTGACGGCTATCCAGAGGGCAGCTCCCTTCCT
GCCCCTGCCTGAGGCTTATGAGGGCAACTCGGTGACAATTAATTTCACCTTTGATATCAACGTGCTGGGCCAGTTGACTG
TAGGGGGATCCGCCAAGTAA

Upstream 100 bases:

>100_bases
ATGCTATAACACTAGCTGGGGTGTTACCCCCGTGGCCCAGTCTGCAACAGACAACTCGGTGTGTTGAGAGCGTTGAAGAA
AGGAAAGGGCAATCTTGGCT

Downstream 100 bases:

>100_bases
ACTACCCGACCCTGACTGCTTCGCGGTACAGAGTAGGCTTTTAGTAGCCCTGCAGTTAGTAAACTAACCACGGACCTCTG
GGATGGTTTACGACACCCCC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTSIWIEQRRREDESRNFFWMVALSLLLHVLVLLGLLHLGRLWLTREPEQEAIEFILLDPEDLQPPEEADLVSEVDSRDG
GERVEAPPSQGSPPQSQAAPPQEAPPPPPPRPQPPPPPAPVPPPPAPAAVALATPTPTPPPKPTPTPTPAPPQPTATPTA
APPPPTPVPRPTPTQTPPPVAAAPSPRPTPPPTAEPLPIQPSERVSDPSQLAPVPPAPQPVTEVLPAQRPSDSSQLGPPV
SASAPSNGAGIQGSGASGLANPTQSAPNPPSVAARADVDWGPWLAALQRKVEQNWIPGQTGTSRRTVVIFTVGRAGDLQS
IRLGRTSGSQQTDDAALTAIQRAAPFLPLPEAYEGNSVTINFTFDINVLGQLTVGGSAK

Sequences:

>Translated_379_residues
MTSIWIEQRRREDESRNFFWMVALSLLLHVLVLLGLLHLGRLWLTREPEQEAIEFILLDPEDLQPPEEADLVSEVDSRDG
GERVEAPPSQGSPPQSQAAPPQEAPPPPPPRPQPPPPPAPVPPPPAPAAVALATPTPTPPPKPTPTPTPAPPQPTATPTA
APPPPTPVPRPTPTQTPPPVAAAPSPRPTPPPTAEPLPIQPSERVSDPSQLAPVPPAPQPVTEVLPAQRPSDSSQLGPPV
SASAPSNGAGIQGSGASGLANPTQSAPNPPSVAARADVDWGPWLAALQRKVEQNWIPGQTGTSRRTVVIFTVGRAGDLQS
IRLGRTSGSQQTDDAALTAIQRAAPFLPLPEAYEGNSVTINFTFDINVLGQLTVGGSAK
>Mature_378_residues
TSIWIEQRRREDESRNFFWMVALSLLLHVLVLLGLLHLGRLWLTREPEQEAIEFILLDPEDLQPPEEADLVSEVDSRDGG
ERVEAPPSQGSPPQSQAAPPQEAPPPPPPRPQPPPPPAPVPPPPAPAAVALATPTPTPPPKPTPTPTPAPPQPTATPTAA
PPPPTPVPRPTPTQTPPPVAAAPSPRPTPPPTAEPLPIQPSERVSDPSQLAPVPPAPQPVTEVLPAQRPSDSSQLGPPVS
ASAPSNGAGIQGSGASGLANPTQSAPNPPSVAARADVDWGPWLAALQRKVEQNWIPGQTGTSRRTVVIFTVGRAGDLQSI
RLGRTSGSQQTDDAALTAIQRAAPFLPLPEAYEGNSVTINFTFDINVLGQLTVGGSAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39633; Mature: 39502

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIWIEQRRREDESRNFFWMVALSLLLHVLVLLGLLHLGRLWLTREPEQEAIEFILLDP
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECC
EDLQPPEEADLVSEVDSRDGGERVEAPPSQGSPPQSQAAPPQEAPPPPPPRPQPPPPPAP
HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPPPPAPAAVALATPTPTPPPKPTPTPTPAPPQPTATPTAAPPPPTPVPRPTPTQTPPPV
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAPSPRPTPPPTAEPLPIQPSERVSDPSQLAPVPPAPQPVTEVLPAQRPSDSSQLGPPV
CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
SASAPSNGAGIQGSGASGLANPTQSAPNPPSVAARADVDWGPWLAALQRKVEQNWIPGQT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC
GTSRRTVVIFTVGRAGDLQSIRLGRTSGSQQTDDAALTAIQRAAPFLPLPEAYEGNSVTI
CCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
NFTFDINVLGQLTVGGSAK
EEEEEEEEEEEEECCCCCC
>Mature Secondary Structure 
TSIWIEQRRREDESRNFFWMVALSLLLHVLVLLGLLHLGRLWLTREPEQEAIEFILLDP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECC
EDLQPPEEADLVSEVDSRDGGERVEAPPSQGSPPQSQAAPPQEAPPPPPPRPQPPPPPAP
HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPPPPAPAAVALATPTPTPPPKPTPTPTPAPPQPTATPTAAPPPPTPVPRPTPTQTPPPV
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAPSPRPTPPPTAEPLPIQPSERVSDPSQLAPVPPAPQPVTEVLPAQRPSDSSQLGPPV
CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
SASAPSNGAGIQGSGASGLANPTQSAPNPPSVAARADVDWGPWLAALQRKVEQNWIPGQT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC
GTSRRTVVIFTVGRAGDLQSIRLGRTSGSQQTDDAALTAIQRAAPFLPLPEAYEGNSVTI
CCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
NFTFDINVLGQLTVGGSAK
EEEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA