| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ppsA [H]
Identifier: 86608593
GI number: 86608593
Start: 1151415
End: 1153880
Strand: Direct
Name: ppsA [H]
Synonym: CYB_1115
Alternate gene names: 86608593
Gene position: 1151415-1153880 (Clockwise)
Preceding gene: 86608592
Following gene: 86608594
Centisome position: 37.79
GC content: 62.29
Gene sequence:
>2466_bases ATGTCGGATGGAGCAACCAGGGGATCCCAGCTTCAGCAACCCTCTCAACCCCAGCTTGGCTCAGAGCCGCCTTTGGTCTT GCCCCTGACGGAGGTGGGGCTGCGGGACGTTGCCCAGGTGGGCGGGAAAAACGCCTCCTTGGGAGAAATGCTGCAGCAGC TCACCTCAAAGGGGATCCAGGTGCCGACAGGATTTGCCACCACCGCCCATGCGTATCGCCAGTTCATCGCCTCTGCGGGC CTAGAGGAGAAGTTGCAGGAGATTTTCAAAGACTTAGACATTGAGAATGTCCAAAATTTGCGCGAGCGGGGCAAGGCTGC CCGCACCTTGATCTTGCAAACTCCCTTCCCCCCTCAGCTAGAGCAGGCCATCGCCGAAGCCTACCAAAAGCTGTGCGAGC GCTACGGCCCCGACACCGATGTGGCGGTGCGCTCCAGTGCCACGGCAGAAGACTTGCCGGATGCCAGCTTTGCCGGCCAG CAGGAGACCTACCTGAACGTGCGTGGAGTGCGGGCGGTGCTCAACGCCTGCCACCACTGTTTTGCCAGCCTGTTTACCGA CCGGGCCATTTCCTACCGCCAAATCAAGGGCTTTGACCATTTTCAAGTAGCCCTCTCGGTGGGGGTGCAGAAGATGGTGC GCTCGGATCTGGCTTGCTCGGGGGTGATGTTCTCCATCGACCCAGAAACCGGCTTTAAAGATGCGGTGCTGATCACCGCC GCCTACGGCCTGGGGGAAAACGTGGTGCAAGGGATCGTCAACCCCGATGAGTACGTGGTCTTCAAACCCACCCTCAAGCA GGGACTGCGCCCCATCCTCTCCCGCAAGCTGGGCAGCAAGGCCCTGAAGCTGGTCTACGACGAGGGGGGATCCCGTTCCA CCAAAAACGTGGCTGTCCCCGAAAGCCTGCGCAAGCAATATGCCCTCAGGGATGAGGAAATCCTCAAATTGGCCCAGTGG GCCTGCTTGATCGAGGAGCACTACTCGGCACAGCGGGGCCGCTTCACCCCCATGGACATCGAGTGGGCCAAAGATGGGAT CACCGGCGAGCTGTTTATCGTCCAGGCCCGCCCCGAAACAGTGCAGTCGCAAAAAGGGGCCAACCAGCTGACCACCTATC GCTTCACCCAGCCTGGGGCGCAGCCCGAGCCTCTGGTGCGGGGACGGGCCGTAGGCGAGGCCATTGGCCAGGGCACAGCC CGCGTCATTTTGGATGTGCGCCGCTCGGATCAGTTTCAGGCCGGCGAGGTGCTGGTGACCGAGAAGACGGATCCCGACTG GGAGCCCATCATGAAGAAAGCCAGCGCCATCGTCACCAACCAGGGGGGCAGAACTTGCCATGCGGCCATCATCGCCCGCG AGCTGGGGATCCCGGCCATTGTTGGCTGCGGCAACGCCACGCAGGTGCTCCGTTCCGGCGATCCCATCACCGTCTCCTGC GCTGAAGGGGAAGAAGGGCGGGTCTACCCGGGCCTGTTGCCCTATGAGGTGACGGAGATCCCGCTGGAGGAGCTGCCCCG TCCCCGCACCCAGCTGATGATGAATGTGGGCAACCCAGAAAAAGCCTTCGGCCTCAGCGGGATCCCTTGCGATGGCGTGG GGCTGGCGCGGCTAGAGTTCATCATTGCCAACCACATTCAGGTCCACCCGCTGGCTTTGCTCAACTATGAGCAGGCGGTG AAAGAGGAGCCGCGCCTGGCAGAGCTCACCGCCCAGTATGCCGACAAGCCGGAGTACTTTGTGGACAAGCTGGCCCAGGG GGTGGCCACCATTGCTGCCGCCTTTTACCCCAAGCCGGTGATCGTGCGGCTGTCGGATTTCAAGAGCAACGAGTATGCCC ACCTGTTGGGGGGATCCCGCTACGAACCCCACGAGGAAAACCCCATGATTGGCTGGCGGGGGGCCTCCCGCTACACGGAT CCCCGCTACCGTGAGGGCTTTGCCTTGGAGTGTCGGGCCATGAAACGGGTGCGGGATGAGATGGGCCTGACCAACGTCAT CTTGATGATCCCCTTCTGCCGCACGCCGGAAGAGGGGCACAAGGTGCTGGAGGAGATGGCCCGCCATGGCCTGGTGCGGG GAGAAAACGGCCTGCAGGTGTACGTGATGTGCGAATTGCCCAGCAATGTTATCCTGGCCGACGAGTTCTGCCAGATCTTC GACGGCTTCTCCATCGGCTCCAACGACCTCACCCAGCTCACTCTGGGCCTGGATCGCGACTCAGCCCTGGTGGCCCACCT TTTTGACGAGCGCCACGAGGCCGTCAGGCGGATGATCGCCCAGGTAATCCAGACGGTGAAAAGCCATGGCCGCAAGATCG GCATCTGCGGGCAGGCCCCCAGCGACTACCCCGACTTCGCCCGCTTCCTGGTGCAAGCAGGGATCGATTCCATCAGCCTC AACCCCGATTCCCTGTTGAAAACCCTGCTGGTGGTGGCCGAAGCAGAAGCGGCTGGCGCCCGGTGA
Upstream 100 bases:
>100_bases TAGGAGAGCCGGGAGCGATCCCAAGCCGACAACACAGCACACCCCAGCAATTGGCGTTGGCTCAATGGATCGCTCAATGG ATCTAAGAAGGAGGTAAGGC
Downstream 100 bases:
>100_bases GCCCAAAGCCGGCCCAGGGACGTGCGCGGGGATCCCGTCTCCTGGGTTACAATCTCTTCTGCTGTGTTCCCATCCCCATC GATGATCCACGAACTCTCCA
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 821; Mature: 820
Protein sequence:
>821_residues MSDGATRGSQLQQPSQPQLGSEPPLVLPLTEVGLRDVAQVGGKNASLGEMLQQLTSKGIQVPTGFATTAHAYRQFIASAG LEEKLQEIFKDLDIENVQNLRERGKAARTLILQTPFPPQLEQAIAEAYQKLCERYGPDTDVAVRSSATAEDLPDASFAGQ QETYLNVRGVRAVLNACHHCFASLFTDRAISYRQIKGFDHFQVALSVGVQKMVRSDLACSGVMFSIDPETGFKDAVLITA AYGLGENVVQGIVNPDEYVVFKPTLKQGLRPILSRKLGSKALKLVYDEGGSRSTKNVAVPESLRKQYALRDEEILKLAQW ACLIEEHYSAQRGRFTPMDIEWAKDGITGELFIVQARPETVQSQKGANQLTTYRFTQPGAQPEPLVRGRAVGEAIGQGTA RVILDVRRSDQFQAGEVLVTEKTDPDWEPIMKKASAIVTNQGGRTCHAAIIARELGIPAIVGCGNATQVLRSGDPITVSC AEGEEGRVYPGLLPYEVTEIPLEELPRPRTQLMMNVGNPEKAFGLSGIPCDGVGLARLEFIIANHIQVHPLALLNYEQAV KEEPRLAELTAQYADKPEYFVDKLAQGVATIAAAFYPKPVIVRLSDFKSNEYAHLLGGSRYEPHEENPMIGWRGASRYTD PRYREGFALECRAMKRVRDEMGLTNVILMIPFCRTPEEGHKVLEEMARHGLVRGENGLQVYVMCELPSNVILADEFCQIF DGFSIGSNDLTQLTLGLDRDSALVAHLFDERHEAVRRMIAQVIQTVKSHGRKIGICGQAPSDYPDFARFLVQAGIDSISL NPDSLLKTLLVVAEAEAAGAR
Sequences:
>Translated_821_residues MSDGATRGSQLQQPSQPQLGSEPPLVLPLTEVGLRDVAQVGGKNASLGEMLQQLTSKGIQVPTGFATTAHAYRQFIASAG LEEKLQEIFKDLDIENVQNLRERGKAARTLILQTPFPPQLEQAIAEAYQKLCERYGPDTDVAVRSSATAEDLPDASFAGQ QETYLNVRGVRAVLNACHHCFASLFTDRAISYRQIKGFDHFQVALSVGVQKMVRSDLACSGVMFSIDPETGFKDAVLITA AYGLGENVVQGIVNPDEYVVFKPTLKQGLRPILSRKLGSKALKLVYDEGGSRSTKNVAVPESLRKQYALRDEEILKLAQW ACLIEEHYSAQRGRFTPMDIEWAKDGITGELFIVQARPETVQSQKGANQLTTYRFTQPGAQPEPLVRGRAVGEAIGQGTA RVILDVRRSDQFQAGEVLVTEKTDPDWEPIMKKASAIVTNQGGRTCHAAIIARELGIPAIVGCGNATQVLRSGDPITVSC AEGEEGRVYPGLLPYEVTEIPLEELPRPRTQLMMNVGNPEKAFGLSGIPCDGVGLARLEFIIANHIQVHPLALLNYEQAV KEEPRLAELTAQYADKPEYFVDKLAQGVATIAAAFYPKPVIVRLSDFKSNEYAHLLGGSRYEPHEENPMIGWRGASRYTD PRYREGFALECRAMKRVRDEMGLTNVILMIPFCRTPEEGHKVLEEMARHGLVRGENGLQVYVMCELPSNVILADEFCQIF DGFSIGSNDLTQLTLGLDRDSALVAHLFDERHEAVRRMIAQVIQTVKSHGRKIGICGQAPSDYPDFARFLVQAGIDSISL NPDSLLKTLLVVAEAEAAGAR >Mature_820_residues SDGATRGSQLQQPSQPQLGSEPPLVLPLTEVGLRDVAQVGGKNASLGEMLQQLTSKGIQVPTGFATTAHAYRQFIASAGL EEKLQEIFKDLDIENVQNLRERGKAARTLILQTPFPPQLEQAIAEAYQKLCERYGPDTDVAVRSSATAEDLPDASFAGQQ ETYLNVRGVRAVLNACHHCFASLFTDRAISYRQIKGFDHFQVALSVGVQKMVRSDLACSGVMFSIDPETGFKDAVLITAA YGLGENVVQGIVNPDEYVVFKPTLKQGLRPILSRKLGSKALKLVYDEGGSRSTKNVAVPESLRKQYALRDEEILKLAQWA CLIEEHYSAQRGRFTPMDIEWAKDGITGELFIVQARPETVQSQKGANQLTTYRFTQPGAQPEPLVRGRAVGEAIGQGTAR VILDVRRSDQFQAGEVLVTEKTDPDWEPIMKKASAIVTNQGGRTCHAAIIARELGIPAIVGCGNATQVLRSGDPITVSCA EGEEGRVYPGLLPYEVTEIPLEELPRPRTQLMMNVGNPEKAFGLSGIPCDGVGLARLEFIIANHIQVHPLALLNYEQAVK EEPRLAELTAQYADKPEYFVDKLAQGVATIAAAFYPKPVIVRLSDFKSNEYAHLLGGSRYEPHEENPMIGWRGASRYTDP RYREGFALECRAMKRVRDEMGLTNVILMIPFCRTPEEGHKVLEEMARHGLVRGENGLQVYVMCELPSNVILADEFCQIFD GFSIGSNDLTQLTLGLDRDSALVAHLFDERHEAVRRMIAQVIQTVKSHGRKIGICGQAPSDYPDFARFLVQAGIDSISLN PDSLLKTLLVVAEAEAAGAR
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=797, Percent_Identity=55.5834378920954, Blast_Score=888, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=403, Percent_Identity=26.0545905707196, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1789193, Length=423, Percent_Identity=26.7139479905437, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788726, Length=377, Percent_Identity=25.1989389920424, Blast_Score=100, Evalue=6e-22, Organism=Escherichia coli, GI48994992, Length=369, Percent_Identity=26.8292682926829, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17564524, Length=236, Percent_Identity=29.6610169491525, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 90169; Mature: 90038
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGATRGSQLQQPSQPQLGSEPPLVLPLTEVGLRDVAQVGGKNASLGEMLQQLTSKGIQ CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC VPTGFATTAHAYRQFIASAGLEEKLQEIFKDLDIENVQNLRERGKAARTLILQTPFPPQL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCHHHEEEEEECCCCHHH EQAIAEAYQKLCERYGPDTDVAVRSSATAEDLPDASFAGQQETYLNVRGVRAVLNACHHC HHHHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHH FASLFTDRAISYRQIKGFDHFQVALSVGVQKMVRSDLACSGVMFSIDPETGFKDAVLITA HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEE AYGLGENVVQGIVNPDEYVVFKPTLKQGLRPILSRKLGSKALKLVYDEGGSRSTKNVAVP ECCCCHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCCCC ESLRKQYALRDEEILKLAQWACLIEEHYSAQRGRFTPMDIEWAKDGITGELFIVQARPET HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEECCCHH VQSQKGANQLTTYRFTQPGAQPEPLVRGRAVGEAIGQGTARVILDVRRSDQFQAGEVLVT HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEE EKTDPDWEPIMKKASAIVTNQGGRTCHAAIIARELGIPAIVGCGNATQVLRSGDPITVSC CCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCEEEEE AEGEEGRVYPGLLPYEVTEIPLEELPRPRTQLMMNVGNPEKAFGLSGIPCDGVGLARLEF CCCCCCCCCCCCCCCHHHCCCHHHCCCCHHHHEEECCCCHHHCCCCCCCCCCCHHHHHHH IIANHIQVHPLALLNYEQAVKEEPRLAELTAQYADKPEYFVDKLAQGVATIAAAFYPKPV HHHCCCEECEEHHHCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE IVRLSDFKSNEYAHLLGGSRYEPHEENPMIGWRGASRYTDPRYREGFALECRAMKRVRDE EEEEECCCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH MGLTNVILMIPFCRTPEEGHKVLEEMARHGLVRGENGLQVYVMCELPSNVILADEFCQIF CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHH DGFSIGSNDLTQLTLGLDRDSALVAHLFDERHEAVRRMIAQVIQTVKSHGRKIGICGQAP CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC SDYPDFARFLVQAGIDSISLNPDSLLKTLLVVAEAEAAGAR CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure SDGATRGSQLQQPSQPQLGSEPPLVLPLTEVGLRDVAQVGGKNASLGEMLQQLTSKGIQ CCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC VPTGFATTAHAYRQFIASAGLEEKLQEIFKDLDIENVQNLRERGKAARTLILQTPFPPQL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCHHHEEEEEECCCCHHH EQAIAEAYQKLCERYGPDTDVAVRSSATAEDLPDASFAGQQETYLNVRGVRAVLNACHHC HHHHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHH FASLFTDRAISYRQIKGFDHFQVALSVGVQKMVRSDLACSGVMFSIDPETGFKDAVLITA HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEE AYGLGENVVQGIVNPDEYVVFKPTLKQGLRPILSRKLGSKALKLVYDEGGSRSTKNVAVP ECCCCHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCCCC ESLRKQYALRDEEILKLAQWACLIEEHYSAQRGRFTPMDIEWAKDGITGELFIVQARPET HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEECCCHH VQSQKGANQLTTYRFTQPGAQPEPLVRGRAVGEAIGQGTARVILDVRRSDQFQAGEVLVT HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEE EKTDPDWEPIMKKASAIVTNQGGRTCHAAIIARELGIPAIVGCGNATQVLRSGDPITVSC CCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCEEEEE AEGEEGRVYPGLLPYEVTEIPLEELPRPRTQLMMNVGNPEKAFGLSGIPCDGVGLARLEF CCCCCCCCCCCCCCCHHHCCCHHHCCCCHHHHEEECCCCHHHCCCCCCCCCCCHHHHHHH IIANHIQVHPLALLNYEQAVKEEPRLAELTAQYADKPEYFVDKLAQGVATIAAAFYPKPV HHHCCCEECEEHHHCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE IVRLSDFKSNEYAHLLGGSRYEPHEENPMIGWRGASRYTDPRYREGFALECRAMKRVRDE EEEEECCCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH MGLTNVILMIPFCRTPEEGHKVLEEMARHGLVRGENGLQVYVMCELPSNVILADEFCQIF CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHH DGFSIGSNDLTQLTLGLDRDSALVAHLFDERHEAVRRMIAQVIQTVKSHGRKIGICGQAP CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC SDYPDFARFLVQAGIDSISLNPDSLLKTLLVVAEAEAAGAR CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]