| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is menC [H]
Identifier: 86608214
GI number: 86608214
Start: 749863
End: 750927
Strand: Reverse
Name: menC [H]
Synonym: CYB_0729
Alternate gene names: 86608214
Gene position: 750927-749863 (Counterclockwise)
Preceding gene: 86608215
Following gene: 86608213
Centisome position: 24.65
GC content: 60.94
Gene sequence:
>1065_bases GTGCCGCTTGGGCGGCTGGAAAAGCGGTTTTCCTTTGCGTTTTGCTCCTACTGGCGTCCCTTTCGGCGGCCCCTGCGTAC CCACCACGGACTGTGGTCCGTGCGCGAAGGGATCCTGATCCGACTTACAGATCGGGAGACAGGCTGTCAGGGATATGGGG AAATTGCTCCCATCCCTTGGTTTGGCAGCGAAACCCTGGAGCAGGCTCTGGCGTTTTGTCGGCAGCTGCCCCCTCTTTTG TCGGAGGCGTATATTTTGGGGATCCCAGAAGCACTGCCGGCCTGCCGGTTTGGGTTGGAAGGCGCTTGGCTGGCCTGTCG GGATCCCGATTGGTTGAACAAGGATCTCTCTCTACTCTCTTTCTGTGAACTTTTGGGGGAGACCCTGCCGCCGGAATCTT ACAAGGACTCCTACAAGGACTCCGTCCCACTCACGCGGTCGGTGTACAAGCTCAAGGTGGGGAGGGATCCCATGCAGCAG GAGTTGGAGAAGCTGGAGCAATGGCTGGAGCGCTTGCCGCCGGGATCCCGTCTGCGTTTGGATGCCAATGGGGGATTATC GCTTGCGGAGGCCCACCGGTGGCTGATGGTTTGTGATCGGCTTAACCAGGACTCGCCGGGCAAGATCGAGTTTTTGGAGC AGCCTCTGCCGCCGGATCAGCACTCCCATCTGGTGGAGCTCAGCCGCCAGTACCAGACCCCCATTGCTTTGGATGAATCG GTGGCCTGTTTGGAACAGTTGCAAGCCGTCCATCGCTCAGGATGGACAGGGATCCTGGTGGTGAAGCCATCTTTGGTGGG CTCCTGCATCGCGCTGCGGGAGTATCTCAGCCGACATCCCGGCCTGGATCTGGTTTTTTCTTCTGCGCTGGAGACTGCCA TCGGCGCTTGGCATGGACTGGCCTGGGCGGGATCCCTGCAAGCCAAAACCGCCTCTCCCCGGGCCGTGGGATGGGGGGTA GGGGAGTTTTTCCAGGAAGGGGATCCCCTGACCTTGACCCAGCTCTCAGCCCAGGAGCGGGCTGCCCTCATGCAGGCGGT GTGGGAGCGCTACAGCCGGCCCTAG
Upstream 100 bases:
>100_bases TGAGAAAACTGGCGTTTTTCCTTTCTTTATCTTGCTTGAGCTTTTTGTGGCTGGTAGGCACAGCAGATCATCTGCAGGGG ATACCCAAAAAGAGGGATCC
Downstream 100 bases:
>100_bases ACTGCGGCGGCCTGTTGTTTGGCGTATTCCTGCCGCAGATAGGCCTGGATAAAATGCATCAGCTCCTCCGGCTCGCCGTT CATAAAGGCCTCGACATTGT
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPLGRLEKRFSFAFCSYWRPFRRPLRTHHGLWSVREGILIRLTDRETGCQGYGEIAPIPWFGSETLEQALAFCRQLPPLL SEAYILGIPEALPACRFGLEGAWLACRDPDWLNKDLSLLSFCELLGETLPPESYKDSYKDSVPLTRSVYKLKVGRDPMQQ ELEKLEQWLERLPPGSRLRLDANGGLSLAEAHRWLMVCDRLNQDSPGKIEFLEQPLPPDQHSHLVELSRQYQTPIALDES VACLEQLQAVHRSGWTGILVVKPSLVGSCIALREYLSRHPGLDLVFSSALETAIGAWHGLAWAGSLQAKTASPRAVGWGV GEFFQEGDPLTLTQLSAQERAALMQAVWERYSRP
Sequences:
>Translated_354_residues MPLGRLEKRFSFAFCSYWRPFRRPLRTHHGLWSVREGILIRLTDRETGCQGYGEIAPIPWFGSETLEQALAFCRQLPPLL SEAYILGIPEALPACRFGLEGAWLACRDPDWLNKDLSLLSFCELLGETLPPESYKDSYKDSVPLTRSVYKLKVGRDPMQQ ELEKLEQWLERLPPGSRLRLDANGGLSLAEAHRWLMVCDRLNQDSPGKIEFLEQPLPPDQHSHLVELSRQYQTPIALDES VACLEQLQAVHRSGWTGILVVKPSLVGSCIALREYLSRHPGLDLVFSSALETAIGAWHGLAWAGSLQAKTASPRAVGWGV GEFFQEGDPLTLTQLSAQERAALMQAVWERYSRP >Mature_353_residues PLGRLEKRFSFAFCSYWRPFRRPLRTHHGLWSVREGILIRLTDRETGCQGYGEIAPIPWFGSETLEQALAFCRQLPPLLS EAYILGIPEALPACRFGLEGAWLACRDPDWLNKDLSLLSFCELLGETLPPESYKDSYKDSVPLTRSVYKLKVGRDPMQQE LEKLEQWLERLPPGSRLRLDANGGLSLAEAHRWLMVCDRLNQDSPGKIEFLEQPLPPDQHSHLVELSRQYQTPIALDESV ACLEQLQAVHRSGWTGILVVKPSLVGSCIALREYLSRHPGLDLVFSSALETAIGAWHGLAWAGSLQAKTASPRAVGWGVG EFFQEGDPLTLTQLSAQERAALMQAVWERYSRP
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR001354 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 39874; Mature: 39743
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLGRLEKRFSFAFCSYWRPFRRPLRTHHGLWSVREGILIRLTDRETGCQGYGEIAPIPW CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCC FGSETLEQALAFCRQLPPLLSEAYILGIPEALPACRFGLEGAWLACRDPDWLNKDLSLLS CCHHHHHHHHHHHHHCCHHHHCHHEEECCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH FCELLGETLPPESYKDSYKDSVPLTRSVYKLKVGRDPMQQELEKLEQWLERLPPGSRLRL HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEEE DANGGLSLAEAHRWLMVCDRLNQDSPGKIEFLEQPLPPDQHSHLVELSRQYQTPIALDES ECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHH VACLEQLQAVHRSGWTGILVVKPSLVGSCIALREYLSRHPGLDLVFSSALETAIGAWHGL HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AWAGSLQAKTASPRAVGWGVGEFFQEGDPLTLTQLSAQERAALMQAVWERYSRP HHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLGRLEKRFSFAFCSYWRPFRRPLRTHHGLWSVREGILIRLTDRETGCQGYGEIAPIPW CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCC FGSETLEQALAFCRQLPPLLSEAYILGIPEALPACRFGLEGAWLACRDPDWLNKDLSLLS CCHHHHHHHHHHHHHCCHHHHCHHEEECCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH FCELLGETLPPESYKDSYKDSVPLTRSVYKLKVGRDPMQQELEKLEQWLERLPPGSRLRL HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCEEEE DANGGLSLAEAHRWLMVCDRLNQDSPGKIEFLEQPLPPDQHSHLVELSRQYQTPIALDES ECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHH VACLEQLQAVHRSGWTGILVVKPSLVGSCIALREYLSRHPGLDLVFSSALETAIGAWHGL HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AWAGSLQAKTASPRAVGWGVGEFFQEGDPLTLTQLSAQERAALMQAVWERYSRP HHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]