| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is prmA [H]
Identifier: 86608182
GI number: 86608182
Start: 714107
End: 715048
Strand: Reverse
Name: prmA [H]
Synonym: CYB_0696
Alternate gene names: 86608182
Gene position: 715048-714107 (Counterclockwise)
Preceding gene: 86608185
Following gene: 86608181
Centisome position: 23.47
GC content: 62.42
Gene sequence:
>942_bases GTGAGCAGAACTGTTGCCAATCCCACTCCGTTTTCGCCCGCACAAGCGCCGGATCCCGGTGGAGCCTGGTGGGATATCAG TCTCATCGCCTCCCCTGCCCAAGAAGACCTGATCTTTTGGCGGCTGGAGAATTTTGGCTGTCGGGGCATGACCAGCCAAG CCTATGGCGAAGATCAGATTTGCATTCACGCCTATCTGCCTTGGCCTCACGTCAGCCTCTTGGATTTGGCAGCCCTCTCC CTGCGCCTGCAGCAGGATGCCCTCATTGCCGGTCAGCGGGTTCCCAAGCTGCGCTGGGAACGCATAGAGGCGGAAGATTG GAGCAGCAGTTGGAAGCAGCACTGGCAGCCCCAACCCATCGGGGATAAGTTGCTCATTTGTCCGGCCTGGCTGGATCCGC CCCCTCACCCCGGTCGGCACCTGTTGCGGCTGGATCCCGGTATGGCCTTCGGCACGGGCACTCACCCCACCACGCAGCTC TGTCTGGAGTCGCTGGAGATGCGCCTGGAGAGCTGGGGAGGGGATCCCCCGGCGGCGACGCTGGCGGATGTGGGCTGTGG ATCCGGCATTTTGTCGTTGGCGGCGGCCCTGTTGGGGGTGAAGCGGGTGTTTGCGGTGGACATCGACCCCCTGGCGGTGC AAGCCACGATGCACAACCGCGATCTCAACGGCCTGACGGATCGCATTGTGGTCGCTCAGGGCAGCCTGGAGCAGATTCCC GAAATGGTGGATGGGCTGGTGTGCAACATCCTGGCAGATGTGATCCTGGATATGATCCCGGAGTTTCGGCTGGTGGTGAA GGAGGGGGGATGGCTGATCCTCAGCGGCATCCTCATCGAGCAGGCCAAGTTGGTGGCGGAGATGCTGGAGGCCAACGAAT GGGTGGTGGCAGCCCTCTGGCGACGGGGGGAATGGTGTTGTCTGAACGCACGCATGACCTGA
Upstream 100 bases:
>100_bases GATATAAAGTACCGCATTGTGTGTAGCTGGCTTGGCGACTTGGAGCGCCATCTTGTTAGCCATCACTTTGGTTTTCCTTT AGGTTTGTGAAGGGATCCCT
Downstream 100 bases:
>100_bases GCGCTTTGCCCCGGTTGGCGATTGACCCGGCGCAGCGGGATCCGAGTGGTGTTCTCCGTTTAACCGGCCCGCAACAGCAC TACTTGCAGCGGGTGCGCCG
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQICIHAYLPWPHVSLLDLAALS LRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPIGDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQL CLESLEMRLESWGGDPPAATLADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALWRRGEWCCLNARMT
Sequences:
>Translated_313_residues MSRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQICIHAYLPWPHVSLLDLAALS LRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPIGDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQL CLESLEMRLESWGGDPPAATLADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALWRRGEWCCLNARMT >Mature_312_residues SRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQICIHAYLPWPHVSLLDLAALSL RLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPIGDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQLC LESLEMRLESWGGDPPAATLADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIPE MVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALWRRGEWCCLNARMT
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=214, Percent_Identity=38.3177570093458, Blast_Score=118, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 34526; Mature: 34395
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQI CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCE CIHAYLPWPHVSLLDLAALSLRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPI EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC GDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQLCLESLEMRLESWGGDPPAAT CCEEEEEECCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHH LADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP HHHCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHH EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALW HHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEHH RRGEWCCLNARMT HCCCEEEECCCCC >Mature Secondary Structure SRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQI CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCE CIHAYLPWPHVSLLDLAALSLRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPI EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC GDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQLCLESLEMRLESWGGDPPAAT CCEEEEEECCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHH LADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP HHHCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHH EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALW HHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEHH RRGEWCCLNARMT HCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA