Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is prmA [H]

Identifier: 86608182

GI number: 86608182

Start: 714107

End: 715048

Strand: Reverse

Name: prmA [H]

Synonym: CYB_0696

Alternate gene names: 86608182

Gene position: 715048-714107 (Counterclockwise)

Preceding gene: 86608185

Following gene: 86608181

Centisome position: 23.47

GC content: 62.42

Gene sequence:

>942_bases
GTGAGCAGAACTGTTGCCAATCCCACTCCGTTTTCGCCCGCACAAGCGCCGGATCCCGGTGGAGCCTGGTGGGATATCAG
TCTCATCGCCTCCCCTGCCCAAGAAGACCTGATCTTTTGGCGGCTGGAGAATTTTGGCTGTCGGGGCATGACCAGCCAAG
CCTATGGCGAAGATCAGATTTGCATTCACGCCTATCTGCCTTGGCCTCACGTCAGCCTCTTGGATTTGGCAGCCCTCTCC
CTGCGCCTGCAGCAGGATGCCCTCATTGCCGGTCAGCGGGTTCCCAAGCTGCGCTGGGAACGCATAGAGGCGGAAGATTG
GAGCAGCAGTTGGAAGCAGCACTGGCAGCCCCAACCCATCGGGGATAAGTTGCTCATTTGTCCGGCCTGGCTGGATCCGC
CCCCTCACCCCGGTCGGCACCTGTTGCGGCTGGATCCCGGTATGGCCTTCGGCACGGGCACTCACCCCACCACGCAGCTC
TGTCTGGAGTCGCTGGAGATGCGCCTGGAGAGCTGGGGAGGGGATCCCCCGGCGGCGACGCTGGCGGATGTGGGCTGTGG
ATCCGGCATTTTGTCGTTGGCGGCGGCCCTGTTGGGGGTGAAGCGGGTGTTTGCGGTGGACATCGACCCCCTGGCGGTGC
AAGCCACGATGCACAACCGCGATCTCAACGGCCTGACGGATCGCATTGTGGTCGCTCAGGGCAGCCTGGAGCAGATTCCC
GAAATGGTGGATGGGCTGGTGTGCAACATCCTGGCAGATGTGATCCTGGATATGATCCCGGAGTTTCGGCTGGTGGTGAA
GGAGGGGGGATGGCTGATCCTCAGCGGCATCCTCATCGAGCAGGCCAAGTTGGTGGCGGAGATGCTGGAGGCCAACGAAT
GGGTGGTGGCAGCCCTCTGGCGACGGGGGGAATGGTGTTGTCTGAACGCACGCATGACCTGA

Upstream 100 bases:

>100_bases
GATATAAAGTACCGCATTGTGTGTAGCTGGCTTGGCGACTTGGAGCGCCATCTTGTTAGCCATCACTTTGGTTTTCCTTT
AGGTTTGTGAAGGGATCCCT

Downstream 100 bases:

>100_bases
GCGCTTTGCCCCGGTTGGCGATTGACCCGGCGCAGCGGGATCCGAGTGGTGTTCTCCGTTTAACCGGCCCGCAACAGCAC
TACTTGCAGCGGGTGCGCCG

Product: ribosomal protein L11 methyltransferase

Products: NA

Alternate protein names: L11 Mtase [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQICIHAYLPWPHVSLLDLAALS
LRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPIGDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQL
CLESLEMRLESWGGDPPAATLADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP
EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALWRRGEWCCLNARMT

Sequences:

>Translated_313_residues
MSRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQICIHAYLPWPHVSLLDLAALS
LRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPIGDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQL
CLESLEMRLESWGGDPPAATLADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP
EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALWRRGEWCCLNARMT
>Mature_312_residues
SRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQICIHAYLPWPHVSLLDLAALSL
RLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPIGDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQLC
LESLEMRLESWGGDPPAATLADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIPE
MVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALWRRGEWCCLNARMT

Specific function: Methylates ribosomal protein L11 [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]

Homologues:

Organism=Escherichia coli, GI2367208, Length=214, Percent_Identity=38.3177570093458, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010456
- InterPro:   IPR004498 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 34526; Mature: 34395

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQI
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCE
CIHAYLPWPHVSLLDLAALSLRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPI
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC
GDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQLCLESLEMRLESWGGDPPAAT
CCEEEEEECCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP
HHHCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHH
EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALW
HHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEHH
RRGEWCCLNARMT
HCCCEEEECCCCC
>Mature Secondary Structure 
SRTVANPTPFSPAQAPDPGGAWWDISLIASPAQEDLIFWRLENFGCRGMTSQAYGEDQI
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCE
CIHAYLPWPHVSLLDLAALSLRLQQDALIAGQRVPKLRWERIEAEDWSSSWKQHWQPQPI
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC
GDKLLICPAWLDPPPHPGRHLLRLDPGMAFGTGTHPTTQLCLESLEMRLESWGGDPPAAT
CCEEEEEECCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LADVGCGSGILSLAAALLGVKRVFAVDIDPLAVQATMHNRDLNGLTDRIVVAQGSLEQIP
HHHCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHH
EMVDGLVCNILADVILDMIPEFRLVVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALW
HHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEHH
RRGEWCCLNARMT
HCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]

General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA