| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is crm2-1
Identifier: 86608086
GI number: 86608086
Start: 600444
End: 602654
Strand: Reverse
Name: crm2-1
Synonym: CYB_0595
Alternate gene names: NA
Gene position: 602654-600444 (Counterclockwise)
Preceding gene: 86608089
Following gene: 86608085
Centisome position: 19.78
GC content: 60.88
Gene sequence:
>2211_bases ATGCGGGCCGCCGTTCGCGCCGACAACGAGGCCGGGATCCCAGAAGAGCTACGGCCCATTTTGGCTCAGGTGCGCCAATT TCAGGAGAGCATGGCGGCGAAGACCTTTCCCAGAACCCCGGCGGAGCTGCAATCCCGCTACCCGGAGCTGTGGCAGCAGA CAACCCGCATCGGCTTGGTTTACGGGGGGGCCACCAAGATCAAGAGCTATGTCTTCGAGTCGGCCAAGCTGTCGGAAATC CGCGGGGCCTCCGCTTTGTTGGATCGCATTAACCTGGTGGATCTGCCCGCCTTTTTCGGGGATCCCGAGCAAACCTACCT GGGATGGGAAGGTTTGGGGAAAGAGTCTCAAGCAGAGCTGAGGGCCTATGTGGCCGAGCAGATCCGGCCTTGGCTGCAGC AGCACTACCCGGCTTTGGCGCAAGCCCTGATCCCGGAGCTCATCATCTACTCCACCGGGGGCAATCTCCTGGCCTTTTGC CCGGCGGCCCATGTGGACGATCTCTGTGAGGCCATCGAGCGGCGCTACACCGAAGAAACCCTCACCGCTAACGCCTGCGC CGTGGGATCCGCCTTTCGGCTGCTGGAACTGCGCTACGGCCTGTTGCGGGATCCCATCGAACGCACCCCCTGGCTGGATT GGCTGGCGCAACACAAAACCCATCCCCTGGTGAGAGCCTATTTTGGGGATGGCAGCGAAGCCAGATTTCAAGACCGCAAA AGTTTCAACGAGTTGGTGGGTTACCTGGCCGCCCGCTTCAACCACCGCCGCAACGGCAATCCGGATCCCGGTCGCCCCAG CCGCGCCCATCCCGCCTTTTTTGAAACCCATCCCTACCTGCGCCGCGACAGCACCGACCGTCGCCCTGCCATCGCCAAAG CCGACCTGGTCGATCAGCCCTGGCTCTCGGAAGCCACCGCTCGCAAAGCCCTGGTGGGTCGCCAGGCCAAGCGCATTGAA ACAGGCAAGCAAGGGTGGTTCCGCAAGTTCCCCACCTGGGATCCCGGCTTTGTGGAAAGCTGGGTAACGCGATTTGCCCG CTTTCTCAACTCTCCCGCCGGCGAGCCCTACCGGGAGCGCTATTTGCAGCCCCATCAGGGATCTGTCCAGGGGATCGGCG AGGCCCAATCTCTACGGGAAGTGGCCAACGCCAGCCTGGGCAGCCAGGGCTTTGTGGCTTACCTTTACGCCGATGGCAAC GACATGGGGGGCTATGTGCAGCAGATCCAAACCCCAGAAGCCTACCGACAATTTAGCCGGGATGTTTCCGAGGCAACGGA AAAAGCCGTTTACCACGCCCTCGCCCAGCACCTGCAGGCCCATCGGCTGCACGGCCTATCCCCAGATCCGGAAACCGGCA GAGACCGCAACGGCGAGTGGATCCACCCCTTCGAGATCCTGACCATCGGCGGAGACGATGTGTTGGTGGTGGTGCCTGCC CACAAAGCCCTGGAAATTGCCGCCACCTTCTGTGAGCAGTTTGAGCAGCTCCTGCTGGACACCTCGGCAACCTATGCAGC TCAATCTTCCGGCAAGGTGCCTCACCGCTACCCGGCGGCAGATCGGAAGCTCTGTCGGCTCTCCGCCTCGGTGGGGGTGC TGATCGCCTCGGAAGACACCCCCATTTACTACGCCGAAAAGCTCACCGAACAACTGTTGAAATCCGCCAAGAGCTACGCG AAAAAGCTGAAGCCCAAAGACAAGGACTGCTCTGTGGCCACCATCGACTTTCTCTCGTTGAAGTCGGTCGCCCTGGTTGT CTCCAGCATCCAGGATTTTCGTCGGGAAGCTCTGGAGATCCGCCAGAACAGCCACACCCTCAAGCTCTACGCCGGCCCCT ATACCGTCCCGGAAATCCACGGGTTGCTGAGAACGGTACAAGCCCTGCAGGAGGCCAATTTTCCTCGCTCCCAGCTTTAT CAGATTCGCAGCTTCTTGGAAAAAGGCAAACGCACCGCCACCCTCAACTATCTCTATTTCCGCAGCCGCCTGGGCAAAAA GGGGCAGCCGCTGATGGAGGCTTTTGAGCGCACCTGGTGCAAGGCCAAAACCAACGACGGCCACCTTCCCCCCTGGATGT ATGTTGAGCCACAGGTATCCTCGTCAACGCCAACCTATGAAACCATCTGGCGGGATCTGGTGGATTTGTACGCCTTTGTG CAAAAACAGCCCCAGGCCGAGGGTCGGCCCGTTCTGGCGGAGGTGGAGTGA
Upstream 100 bases:
>100_bases CCCTACTTCCGCTCCCTCTCCCGTTCCTGTTGCCTTGGCCTGGTGCCTGGCGTGGGGAGACCAGCGGGATCCCCAGTTTG CCCTGGAGACCTTGCAGCAG
Downstream 100 bases:
>100_bases TGGTGAGACTGGCAGAGCTGCCCCAAGCGGGGCGAACGATCACCTCTATCCCTTTGAGGGCCACCCTCGCCTCTGCCCTG GCGGTGGGAGCCGGCGGCTC
Product: CRISPR-associated RAMP Crm2 family protein
Products: NA
Alternate protein names: Hydrolase; CRISPR-Associated Protein Crm2 Family; Crm2 Family CRISPR-Associated Protein
Number of amino acids: Translated: 736; Mature: 736
Protein sequence:
>736_residues MRAAVRADNEAGIPEELRPILAQVRQFQESMAAKTFPRTPAELQSRYPELWQQTTRIGLVYGGATKIKSYVFESAKLSEI RGASALLDRINLVDLPAFFGDPEQTYLGWEGLGKESQAELRAYVAEQIRPWLQQHYPALAQALIPELIIYSTGGNLLAFC PAAHVDDLCEAIERRYTEETLTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHKTHPLVRAYFGDGSEARFQDRK SFNELVGYLAARFNHRRNGNPDPGRPSRAHPAFFETHPYLRRDSTDRRPAIAKADLVDQPWLSEATARKALVGRQAKRIE TGKQGWFRKFPTWDPGFVESWVTRFARFLNSPAGEPYRERYLQPHQGSVQGIGEAQSLREVANASLGSQGFVAYLYADGN DMGGYVQQIQTPEAYRQFSRDVSEATEKAVYHALAQHLQAHRLHGLSPDPETGRDRNGEWIHPFEILTIGGDDVLVVVPA HKALEIAATFCEQFEQLLLDTSATYAAQSSGKVPHRYPAADRKLCRLSASVGVLIASEDTPIYYAEKLTEQLLKSAKSYA KKLKPKDKDCSVATIDFLSLKSVALVVSSIQDFRREALEIRQNSHTLKLYAGPYTVPEIHGLLRTVQALQEANFPRSQLY QIRSFLEKGKRTATLNYLYFRSRLGKKGQPLMEAFERTWCKAKTNDGHLPPWMYVEPQVSSSTPTYETIWRDLVDLYAFV QKQPQAEGRPVLAEVE
Sequences:
>Translated_736_residues MRAAVRADNEAGIPEELRPILAQVRQFQESMAAKTFPRTPAELQSRYPELWQQTTRIGLVYGGATKIKSYVFESAKLSEI RGASALLDRINLVDLPAFFGDPEQTYLGWEGLGKESQAELRAYVAEQIRPWLQQHYPALAQALIPELIIYSTGGNLLAFC PAAHVDDLCEAIERRYTEETLTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHKTHPLVRAYFGDGSEARFQDRK SFNELVGYLAARFNHRRNGNPDPGRPSRAHPAFFETHPYLRRDSTDRRPAIAKADLVDQPWLSEATARKALVGRQAKRIE TGKQGWFRKFPTWDPGFVESWVTRFARFLNSPAGEPYRERYLQPHQGSVQGIGEAQSLREVANASLGSQGFVAYLYADGN DMGGYVQQIQTPEAYRQFSRDVSEATEKAVYHALAQHLQAHRLHGLSPDPETGRDRNGEWIHPFEILTIGGDDVLVVVPA HKALEIAATFCEQFEQLLLDTSATYAAQSSGKVPHRYPAADRKLCRLSASVGVLIASEDTPIYYAEKLTEQLLKSAKSYA KKLKPKDKDCSVATIDFLSLKSVALVVSSIQDFRREALEIRQNSHTLKLYAGPYTVPEIHGLLRTVQALQEANFPRSQLY QIRSFLEKGKRTATLNYLYFRSRLGKKGQPLMEAFERTWCKAKTNDGHLPPWMYVEPQVSSSTPTYETIWRDLVDLYAFV QKQPQAEGRPVLAEVE >Mature_736_residues MRAAVRADNEAGIPEELRPILAQVRQFQESMAAKTFPRTPAELQSRYPELWQQTTRIGLVYGGATKIKSYVFESAKLSEI RGASALLDRINLVDLPAFFGDPEQTYLGWEGLGKESQAELRAYVAEQIRPWLQQHYPALAQALIPELIIYSTGGNLLAFC PAAHVDDLCEAIERRYTEETLTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHKTHPLVRAYFGDGSEARFQDRK SFNELVGYLAARFNHRRNGNPDPGRPSRAHPAFFETHPYLRRDSTDRRPAIAKADLVDQPWLSEATARKALVGRQAKRIE TGKQGWFRKFPTWDPGFVESWVTRFARFLNSPAGEPYRERYLQPHQGSVQGIGEAQSLREVANASLGSQGFVAYLYADGN DMGGYVQQIQTPEAYRQFSRDVSEATEKAVYHALAQHLQAHRLHGLSPDPETGRDRNGEWIHPFEILTIGGDDVLVVVPA HKALEIAATFCEQFEQLLLDTSATYAAQSSGKVPHRYPAADRKLCRLSASVGVLIASEDTPIYYAEKLTEQLLKSAKSYA KKLKPKDKDCSVATIDFLSLKSVALVVSSIQDFRREALEIRQNSHTLKLYAGPYTVPEIHGLLRTVQALQEANFPRSQLY QIRSFLEKGKRTATLNYLYFRSRLGKKGQPLMEAFERTWCKAKTNDGHLPPWMYVEPQVSSSTPTYETIWRDLVDLYAFV QKQPQAEGRPVLAEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83162; Mature: 83162
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAVRADNEAGIPEELRPILAQVRQFQESMAAKTFPRTPAELQSRYPELWQQTTRIGLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEE YGGATKIKSYVFESAKLSEIRGASALLDRINLVDLPAFFGDPEQTYLGWEGLGKESQAEL ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHCCCCCCCEECCCCCCCHHHHHH RAYVAEQIRPWLQQHYPALAQALIPELIIYSTGGNLLAFCPAAHVDDLCEAIERRYTEET HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHH LTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHKTHPLVRAYFGDGSEARFQDRK HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH SFNELVGYLAARFNHRRNGNPDPGRPSRAHPAFFETHPYLRRDSTDRRPAIAKADLVDQP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCHHHHCCCCCC WLSEATARKALVGRQAKRIETGKQGWFRKFPTWDPGFVESWVTRFARFLNSPAGEPYRER CHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH YLQPHQGSVQGIGEAQSLREVANASLGSQGFVAYLYADGNDMGGYVQQIQTPEAYRQFSR CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHHH DVSEATEKAVYHALAQHLQAHRLHGLSPDPETGRDRNGEWIHPFEILTIGGDDVLVVVPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECC HKALEIAATFCEQFEQLLLDTSATYAAQSSGKVPHRYPAADRKLCRLSASVGVLIASEDT HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC PIYYAEKLTEQLLKSAKSYAKKLKPKDKDCSVATIDFLSLKSVALVVSSIQDFRREALEI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH RQNSHTLKLYAGPYTVPEIHGLLRTVQALQEANFPRSQLYQIRSFLEKGKRTATLNYLYF HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHH RSRLGKKGQPLMEAFERTWCKAKTNDGHLPPWMYVEPQVSSSTPTYETIWRDLVDLYAFV HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH QKQPQAEGRPVLAEVE HCCCCCCCCCEEEECC >Mature Secondary Structure MRAAVRADNEAGIPEELRPILAQVRQFQESMAAKTFPRTPAELQSRYPELWQQTTRIGLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEE YGGATKIKSYVFESAKLSEIRGASALLDRINLVDLPAFFGDPEQTYLGWEGLGKESQAEL ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHCCCCCCCEECCCCCCCHHHHHH RAYVAEQIRPWLQQHYPALAQALIPELIIYSTGGNLLAFCPAAHVDDLCEAIERRYTEET HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHH LTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHKTHPLVRAYFGDGSEARFQDRK HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH SFNELVGYLAARFNHRRNGNPDPGRPSRAHPAFFETHPYLRRDSTDRRPAIAKADLVDQP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCHHHHCCCCCC WLSEATARKALVGRQAKRIETGKQGWFRKFPTWDPGFVESWVTRFARFLNSPAGEPYRER CHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH YLQPHQGSVQGIGEAQSLREVANASLGSQGFVAYLYADGNDMGGYVQQIQTPEAYRQFSR CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHHH DVSEATEKAVYHALAQHLQAHRLHGLSPDPETGRDRNGEWIHPFEILTIGGDDVLVVVPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECC HKALEIAATFCEQFEQLLLDTSATYAAQSSGKVPHRYPAADRKLCRLSASVGVLIASEDT HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC PIYYAEKLTEQLLKSAKSYAKKLKPKDKDCSVATIDFLSLKSVALVVSSIQDFRREALEI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH RQNSHTLKLYAGPYTVPEIHGLLRTVQALQEANFPRSQLYQIRSFLEKGKRTATLNYLYF HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHH RSRLGKKGQPLMEAFERTWCKAKTNDGHLPPWMYVEPQVSSSTPTYETIWRDLVDLYAFV HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH QKQPQAEGRPVLAEVE HCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA