Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608024

Identifier: 86608024

GI number: 86608024

Start: 546440

End: 546901

Strand: Reverse

Name: 86608024

Synonym: CYB_0532

Alternate gene names: NA

Gene position: 546901-546440 (Counterclockwise)

Preceding gene: 86608025

Following gene: 86608022

Centisome position: 17.95

GC content: 59.31

Gene sequence:

>462_bases
ATGAACCCGCTTTTCCCCTTCAAACTCGGCCTGAGCCTGGTTTTGCTCTTGGGCCCGTTGGCCATCTCTCCCGCCCAAGC
GCAGCGGATTGTCATCGACGGGCGAGGGATCGTTGTAGAACCCAGCACAGGTGGCTCGGTGATCCTCAATCCCGACCAGC
CGGTCTTTTCTCCAATCTTGCCCTCTGCAGTTCCTTTTTCCATCGATGAAGAAGGCAAGATCGTCTCTGCCCCTGGCTAC
CGCTGCAGTGCGGCTACTGCTGCCGACAACTCCCCCATCATCTGTCGCTCCCGGTTCAACCGCAACGACGTGGTAGTGTA
TGAGCGGGACGGCCAATCCAACACCTTCTTCGTAAATGCTGACAACACAGTGATCCGGCCCTCCGGCAGTGGGCTGCGGA
TTGTGCCCAACCCTGAACCGGCGACTCCCTCGGGTAGCGGCCTGCGCATCATCCTAGACTGA

Upstream 100 bases:

>100_bases
GGCCAAGATCAAGTTAAGTTGAGCCAGGGATCCATCCCCTGCAAGGATCGTTGGCGGATCCCTGGAAGCTGTCATGGCCC
TTGGCAAAAGGAGATGTCCG

Downstream 100 bases:

>100_bases
GGGCAGGGATCCCTTCACCTCTTGTCCAGTTGCAACCGCAGCATTTGCTCTGCATCCTAGAGAGGTTTGGCGAAGAAATA
GCCCTGGCCATACTCGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNPLFPFKLGLSLVLLLGPLAISPAQAQRIVIDGRGIVVEPSTGGSVILNPDQPVFSPILPSAVPFSIDEEGKIVSAPGY
RCSAATAADNSPIICRSRFNRNDVVVYERDGQSNTFFVNADNTVIRPSGSGLRIVPNPEPATPSGSGLRIILD

Sequences:

>Translated_153_residues
MNPLFPFKLGLSLVLLLGPLAISPAQAQRIVIDGRGIVVEPSTGGSVILNPDQPVFSPILPSAVPFSIDEEGKIVSAPGY
RCSAATAADNSPIICRSRFNRNDVVVYERDGQSNTFFVNADNTVIRPSGSGLRIVPNPEPATPSGSGLRIILD
>Mature_153_residues
MNPLFPFKLGLSLVLLLGPLAISPAQAQRIVIDGRGIVVEPSTGGSVILNPDQPVFSPILPSAVPFSIDEEGKIVSAPGY
RCSAATAADNSPIICRSRFNRNDVVVYERDGQSNTFFVNADNTVIRPSGSGLRIVPNPEPATPSGSGLRIILD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16153; Mature: 16153

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLFPFKLGLSLVLLLGPLAISPAQAQRIVIDGRGIVVEPSTGGSVILNPDQPVFSPIL
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCCCCCC
PSAVPFSIDEEGKIVSAPGYRCSAATAADNSPIICRSRFNRNDVVVYERDGQSNTFFVNA
CCCCCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC
DNTVIRPSGSGLRIVPNPEPATPSGSGLRIILD
CCEEEEECCCCEEEECCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MNPLFPFKLGLSLVLLLGPLAISPAQAQRIVIDGRGIVVEPSTGGSVILNPDQPVFSPIL
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCCCCCC
PSAVPFSIDEEGKIVSAPGYRCSAATAADNSPIICRSRFNRNDVVVYERDGQSNTFFVNA
CCCCCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC
DNTVIRPSGSGLRIVPNPEPATPSGSGLRIILD
CCEEEEECCCCEEEECCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA