| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608010
Identifier: 86608010
GI number: 86608010
Start: 531483
End: 532535
Strand: Reverse
Name: 86608010
Synonym: CYB_0517
Alternate gene names: NA
Gene position: 532535-531483 (Counterclockwise)
Preceding gene: 86608011
Following gene: 86608008
Centisome position: 17.48
GC content: 61.25
Gene sequence:
>1053_bases ATGCGCAACCTCTCTTCCGTTTTGCTGTTCGGGATCCCTTTGGTAAGCCTAGGCTGGACAGGGATCCCGGTGGTGGCCCA ATCCGCCAATCCAGCCCTCTGCCAGCAATTTCCCCAAGACATTCGCTGCACCCTCTCTGCCCCCAGACAGGTGGGACAAG CGCCGCAACCCACATCCCGTCCTCGGATTGCAGTCTTGGACTTTGATTTCAGCAGCCTCAGCAATCCCTACAGCTTCCGC GAGGCTTCTCGGGGGGTGAGCGACCTGTTGGTGGATCGGCTGGTGAGAGATGGCACCTTTTCCGTCATCGAGCGCTCGCG GCTGGACGCGATCTTGGCCGAGCAGAACCTGGGTCTATCCGGTCGACTGGATGCCAACACCGCTGCTCAGGTAGGCCGGA TCCTAGGGGTCGATGCGGTGATCCTCGGCAGTGTGACCCAGTTTGATGTGTCTGTGCGCCGTTCTGGGGGTGGGGCACCG GTCTTAACTCCCTTCGGCAGCTTCCCGCTGGCGGTGGGCGCTGAGTCAGTGGATGCCGATGCCAACGTGCAGCTGAATGC CCGCTTGGTGAGCACCAGTACTGCCGAGATCTTGGCCGTGGTCGAGGGCAAAGGCAACGCCAGCCAGTCGGATAGCACGG TCACGGTTGCCGGCTTTGGCGGGGGATCCGCCACCAGCAACGAAGAGAAGCTGTTGGTATTGGCAAGCCAACAAGCGGTG GAGCAAATTGCCCAGCAGTTGGCCGGTTTTGCCGGGCGCTTGGCAGCTCAGCCTCGCTCTCTGCCAACGGTTGACGCCTT GGTGGCGGATGTCTACGGCAACCAGGTGATCCTGAACAAGGGCAGCCGCGATGGCTATCGGGTGGGATTGATTCTTTCTG TGGAGCGCGTCGTCCGCGAGGTGAAGGATCCGGCCACGGGGACAGTCTTGCGCAAATTGACTGAGCCAGCCGGACAGGTC CAACTGACGGAGGTGGATGACAGCTCCAGTGTGGGACGCATTCTCAGCGGGGCAGGCTTCAAGGTTGGGGATGTAGCCAA GCCTGTCCAATGA
Upstream 100 bases:
>100_bases CCTTAGCTGCCAGGTGATACCGGTCACCGCCCTGAAGCTCTTTTGGGTGCAAGCTGAGAGTAACTGTGGCCACTTCCCAG ATCTAGGAGATCGTTTAACC
Downstream 100 bases:
>100_bases GCTTTCCCAAGCCCTATCCTCAGGATCCCTCGATGGGAGCAAAGCCCTGCCGTTGCGTGTTTTCGGTTACGGTGCGCGGC TCTAAAAATTGCAGCAGGTA
Product: CsgG family protein
Products: NA
Alternate protein names: CsgG Family Protein; Curli Production Assembly/Transport Component
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRNLSSVLLFGIPLVSLGWTGIPVVAQSANPALCQQFPQDIRCTLSAPRQVGQAPQPTSRPRIAVLDFDFSSLSNPYSFR EASRGVSDLLVDRLVRDGTFSVIERSRLDAILAEQNLGLSGRLDANTAAQVGRILGVDAVILGSVTQFDVSVRRSGGGAP VLTPFGSFPLAVGAESVDADANVQLNARLVSTSTAEILAVVEGKGNASQSDSTVTVAGFGGGSATSNEEKLLVLASQQAV EQIAQQLAGFAGRLAAQPRSLPTVDALVADVYGNQVILNKGSRDGYRVGLILSVERVVREVKDPATGTVLRKLTEPAGQV QLTEVDDSSSVGRILSGAGFKVGDVAKPVQ
Sequences:
>Translated_350_residues MRNLSSVLLFGIPLVSLGWTGIPVVAQSANPALCQQFPQDIRCTLSAPRQVGQAPQPTSRPRIAVLDFDFSSLSNPYSFR EASRGVSDLLVDRLVRDGTFSVIERSRLDAILAEQNLGLSGRLDANTAAQVGRILGVDAVILGSVTQFDVSVRRSGGGAP VLTPFGSFPLAVGAESVDADANVQLNARLVSTSTAEILAVVEGKGNASQSDSTVTVAGFGGGSATSNEEKLLVLASQQAV EQIAQQLAGFAGRLAAQPRSLPTVDALVADVYGNQVILNKGSRDGYRVGLILSVERVVREVKDPATGTVLRKLTEPAGQV QLTEVDDSSSVGRILSGAGFKVGDVAKPVQ >Mature_350_residues MRNLSSVLLFGIPLVSLGWTGIPVVAQSANPALCQQFPQDIRCTLSAPRQVGQAPQPTSRPRIAVLDFDFSSLSNPYSFR EASRGVSDLLVDRLVRDGTFSVIERSRLDAILAEQNLGLSGRLDANTAAQVGRILGVDAVILGSVTQFDVSVRRSGGGAP VLTPFGSFPLAVGAESVDADANVQLNARLVSTSTAEILAVVEGKGNASQSDSTVTVAGFGGGSATSNEEKLLVLASQQAV EQIAQQLAGFAGRLAAQPRSLPTVDALVADVYGNQVILNKGSRDGYRVGLILSVERVVREVKDPATGTVLRKLTEPAGQV QLTEVDDSSSVGRILSGAGFKVGDVAKPVQ
Specific function: Unknown
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36519; Mature: 36519
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLSSVLLFGIPLVSLGWTGIPVVAQSANPALCQQFPQDIRCTLSAPRQVGQAPQPTSR CCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCHHHEEEECCCHHHCCCCCCCCC PRIAVLDFDFSSLSNPYSFREASRGVSDLLVDRLVRDGTFSVIERSRLDAILAEQNLGLS CEEEEEECCHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC GRLDANTAAQVGRILGVDAVILGSVTQFDVSVRRSGGGAPVLTPFGSFPLAVGAESVDAD CCCCCCHHHHHHHHHCCCHHHHCCCEEEEEEEEECCCCCEEECCCCCCCEEECCCCCCCC ANVQLNARLVSTSTAEILAVVEGKGNASQSDSTVTVAGFGGGSATSNEEKLLVLASQQAV CCEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHH EQIAQQLAGFAGRLAAQPRSLPTVDALVADVYGNQVILNKGSRDGYRVGLILSVERVVRE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEHHHHHHH VKDPATGTVLRKLTEPAGQVQLTEVDDSSSVGRILSGAGFKVGDVAKPVQ HCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRNLSSVLLFGIPLVSLGWTGIPVVAQSANPALCQQFPQDIRCTLSAPRQVGQAPQPTSR CCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCHHHEEEECCCHHHCCCCCCCCC PRIAVLDFDFSSLSNPYSFREASRGVSDLLVDRLVRDGTFSVIERSRLDAILAEQNLGLS CEEEEEECCHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC GRLDANTAAQVGRILGVDAVILGSVTQFDVSVRRSGGGAPVLTPFGSFPLAVGAESVDAD CCCCCCHHHHHHHHHCCCHHHHCCCEEEEEEEEECCCCCEEECCCCCCCEEECCCCCCCC ANVQLNARLVSTSTAEILAVVEGKGNASQSDSTVTVAGFGGGSATSNEEKLLVLASQQAV CCEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHH EQIAQQLAGFAGRLAAQPRSLPTVDALVADVYGNQVILNKGSRDGYRVGLILSVERVVRE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEHHHHHHH VKDPATGTVLRKLTEPAGQVQLTEVDDSSSVGRILSGAGFKVGDVAKPVQ HCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA