Click here to switch to the map view.

The map label for this gene is yhfK [H]

Identifier: 86608008

GI number: 86608008

Start: 527704

End: 528363

Strand: Reverse

Name: yhfK [H]

Synonym: CYB_0515

Alternate gene names: 86608008

Gene position: 528363-527704 (Counterclockwise)

Preceding gene: 86608010

Following gene: 86608001

Centisome position: 17.34

GC content: 57.42

Gene sequence:

>660_bases
ATGCAGGCTTTTGTTGCAGGGGCTACAGGAGAAACCGGACGCCGCATTGTCAAAGAGTTGGTGGGCCGCGACATCCCGGT
ACGGGCGCTGGTGCGCAGCCATGAGCTGGCCGCTCGGGTTTTGCCCCGCGAAGCGGAAGTGGTGGTGGGGGATGTGCTGG
ATCCGGCCACGCTGGAGACAGGCATGGAAGGATGCACGGTGGTGCTCTGTGCCACCGGGGCCAGGCCCAGTTGGGATCCC
TTTCAGCCCTACCGAGTGGATTATGAAGGCACCAAGAACCTGGTAGATGTGGCCAAAGCCAAAGGGATCCAACACTTTGT
TTTGATTTCTTCTCTGTGCGTGTCTCAGTTGTTCCACCCCCTCAATTTGTTTTGGCTGATTTTGGTGTGGAAAAAACGCG
CAGAAGAATACCTGCAAAAAAGCGGCCTCACCTACACCATCGTTCGACCGGGGGGCCTAAAAAACCAAGACAACGACGAT
GGCATTGTCCTATCCAAGGCGGATACCCTCTTTGACGGCAGCATCCCCCGCACGAAAGTAGCCCAAGTGGCCGTCGAAAG
TTTATTCCAGCCCGCCGCCCAAAATCGCATCCTTGAGATCATCGCCAAGCCGGGTGTGCCCAACCGCGACTGGAGCGCCC
TCTTTGCCATGGCAGGATAG

Upstream 100 bases:

>100_bases
AGGGAACCTGAGGCCGATTTTGGGAAGATAATGGCAGATGGGGCCACCGCAAATCCTCAAACAGCTACACCGGGTATAAA
CAGCTTTGCAGGAGAAACTT

Downstream 100 bases:

>100_bases
GATGTTCGCGCCAGGCTTGCCCTCAACTCTCCTCTGCCTTGGAATCAGCAGACTTCGCCAACTGCTGCAAGCGATCTAGG
ATCCGCGCCTCAGCGTTGGC

Product: 3-beta hydroxysteroid dehydrogenase/isomerase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MQAFVAGATGETGRRIVKELVGRDIPVRALVRSHELAARVLPREAEVVVGDVLDPATLETGMEGCTVVLCATGARPSWDP
FQPYRVDYEGTKNLVDVAKAKGIQHFVLISSLCVSQLFHPLNLFWLILVWKKRAEEYLQKSGLTYTIVRPGGLKNQDNDD
GIVLSKADTLFDGSIPRTKVAQVAVESLFQPAAQNRILEIIAKPGVPNRDWSALFAMAG

Sequences:

>Translated_219_residues
MQAFVAGATGETGRRIVKELVGRDIPVRALVRSHELAARVLPREAEVVVGDVLDPATLETGMEGCTVVLCATGARPSWDP
FQPYRVDYEGTKNLVDVAKAKGIQHFVLISSLCVSQLFHPLNLFWLILVWKKRAEEYLQKSGLTYTIVRPGGLKNQDNDD
GIVLSKADTLFDGSIPRTKVAQVAVESLFQPAAQNRILEIIAKPGVPNRDWSALFAMAG
>Mature_219_residues
MQAFVAGATGETGRRIVKELVGRDIPVRALVRSHELAARVLPREAEVVVGDVLDPATLETGMEGCTVVLCATGARPSWDP
FQPYRVDYEGTKNLVDVAKAKGIQHFVLISSLCVSQLFHPLNLFWLILVWKKRAEEYLQKSGLTYTIVRPGGLKNQDNDD
GIVLSKADTLFDGSIPRTKVAQVAVESLFQPAAQNRILEIIAKPGVPNRDWSALFAMAG

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 23981; Mature: 23981

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFVAGATGETGRRIVKELVGRDIPVRALVRSHELAARVLPREAEVVVGDVLDPATLET
CCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCHHHHC
GMEGCTVVLCATGARPSWDPFQPYRVDYEGTKNLVDVAKAKGIQHFVLISSLCVSQLFHP
CCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LNLFWLILVWKKRAEEYLQKSGLTYTIVRPGGLKNQDNDDGIVLSKADTLFDGSIPRTKV
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCHHCCCCCCHHHH
AQVAVESLFQPAAQNRILEIIAKPGVPNRDWSALFAMAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECC
>Mature Secondary Structure
MQAFVAGATGETGRRIVKELVGRDIPVRALVRSHELAARVLPREAEVVVGDVLDPATLET
CCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCHHHHC
GMEGCTVVLCATGARPSWDPFQPYRVDYEGTKNLVDVAKAKGIQHFVLISSLCVSQLFHP
CCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LNLFWLILVWKKRAEEYLQKSGLTYTIVRPGGLKNQDNDDGIVLSKADTLFDGSIPRTKV
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCHHCCCCCCHHHH
AQVAVESLFQPAAQNRILEIIAKPGVPNRDWSALFAMAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]