Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608007

Identifier: 86608007

GI number: 86608007

Start: 527385

End: 527681

Strand: Direct

Name: 86608007

Synonym: CYB_0514

Alternate gene names: NA

Gene position: 527385-527681 (Clockwise)

Preceding gene: 86608006

Following gene: 86608009

Centisome position: 17.31

GC content: 63.3

Gene sequence:

>297_bases
ATGCAGGTGCGTATCCTCAGGCGGCGGGAGTGTGGAGCGGGGTGGGCCACTGACCTGCTGCTGCCGCGCTGCCTTGCCTG
GTCGGAGGTAGAGGTTCTGGCCCAGGAATGGAGGGCTGCCTGTCGCTGTTTTCAAGGGCAACTGGTGTGGCTGGATCTGC
CCTCAGGCCGGATTACGGCTTCACTGCGGGTGCCCCGCCTGACGTTGCGACTCCACGATGCCAACGCTGAGGCGCGGATC
CTAGATCGCTTGCAGCAGTTGGCGAAGTCTGCTGATTCCAAGGCAGAGGAGAGTTGA

Upstream 100 bases:

>100_bases
CCACGGCCAGGAGACCAAGGCCAGAGAGAAGGGGGATCCCTGGTGCGAGTTCTACGCCGCTCGCGTCAGCGGGACGGAGT
CCTTGCGGATGTAGGGATCC

Downstream 100 bases:

>100_bases
GGGCAAGCCTGGCGCGAACATCCTATCCTGCCATGGCAAAGAGGGCGCTCCAGTCGCGGTTGGGCACACCCGGCTTGGCG
ATGATCTCAAGGATGCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MQVRILRRRECGAGWATDLLLPRCLAWSEVEVLAQEWRAACRCFQGQLVWLDLPSGRITASLRVPRLTLRLHDANAEARI
LDRLQQLAKSADSKAEES

Sequences:

>Translated_98_residues
MQVRILRRRECGAGWATDLLLPRCLAWSEVEVLAQEWRAACRCFQGQLVWLDLPSGRITASLRVPRLTLRLHDANAEARI
LDRLQQLAKSADSKAEES
>Mature_98_residues
MQVRILRRRECGAGWATDLLLPRCLAWSEVEVLAQEWRAACRCFQGQLVWLDLPSGRITASLRVPRLTLRLHDANAEARI
LDRLQQLAKSADSKAEES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11155; Mature: 11155

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVRILRRRECGAGWATDLLLPRCLAWSEVEVLAQEWRAACRCFQGQLVWLDLPSGRITA
CCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEE
SLRVPRLTLRLHDANAEARILDRLQQLAKSADSKAEES
EEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQVRILRRRECGAGWATDLLLPRCLAWSEVEVLAQEWRAACRCFQGQLVWLDLPSGRITA
CCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEE
SLRVPRLTLRLHDANAEARILDRLQQLAKSADSKAEES
EEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA