Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608005

Identifier: 86608005

GI number: 86608005

Start: 525407

End: 526018

Strand: Direct

Name: 86608005

Synonym: CYB_0512

Alternate gene names: NA

Gene position: 525407-526018 (Clockwise)

Preceding gene: 86608004

Following gene: 86608006

Centisome position: 17.25

GC content: 56.37

Gene sequence:

>612_bases
ATGGCTATCCGAACCCTCAGCAGCGTGATTGAACAGCACATCGCCGGCCTTCCGGGCTTGATTGCTGTTTTGATAGGGCG
GGCCACTGATGGTGCTACAGTAGCCAAAGTAACCTACGTCAGCGATTCCCAAGAGGAGCAAGCCCTAGAACGTTTGGGCA
CCTACGCCGGCGACCTGTTGCAGGCCAATAGCCGCCTTTGTCAAACCGTCAGCCCCGACCAAGAGGCGGACTACCTCTTG
GCAGGTACTCCGGCGCTGCGGGTTGTCATCAAAGCGTTTCCCAAAAGCCCCTACTTTGTCTTGTTTCTGACCCGTTCCAT
CACCGACCTCAGAGCCATTTCAGAGCGCATCAAAGCCATTCTGATTGACGGAAAGCCGCTACTGCCCCCTGTGCAGGACA
GCACCATGTCTTTGGCTCAGGCTCTGATGGACTATGCCAAGCGCTACGCTCCGGATCCCAACTTTGTGGCCCTGCGCCTG
TCTTTGAAAACAGGTCTAGACCGCAACCGCCTTGAAAAAGGCACCCTGACCCGACAGGAGCTGCGCATTCTTTACAAAGC
GGTAGCAGATCTTTTGGGCCGAGAGCGGCTGCCTATTGCCATGCCGGTTTGA

Upstream 100 bases:

>100_bases
TGGAAATATCCGATCCATCCTAGTTCACTAGATACTCCAATATCCCGTGTATATACTTATACTTAAATTATCCCATGTAG
CCGCAGGAAGGAGTCAGATC

Downstream 100 bases:

>100_bases
GTAGTCGAGAATGGCTGGCGAGCTTTGCCTGAGGGCAGTTGCCGCGCTCAGGGGCCTGCTTTGAGCACTATCATTCATCT
CAACCCACTTGTCCATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAIRTLSSVIEQHIAGLPGLIAVLIGRATDGATVAKVTYVSDSQEEQALERLGTYAGDLLQANSRLCQTVSPDQEADYLL
AGTPALRVVIKAFPKSPYFVLFLTRSITDLRAISERIKAILIDGKPLLPPVQDSTMSLAQALMDYAKRYAPDPNFVALRL
SLKTGLDRNRLEKGTLTRQELRILYKAVADLLGRERLPIAMPV

Sequences:

>Translated_203_residues
MAIRTLSSVIEQHIAGLPGLIAVLIGRATDGATVAKVTYVSDSQEEQALERLGTYAGDLLQANSRLCQTVSPDQEADYLL
AGTPALRVVIKAFPKSPYFVLFLTRSITDLRAISERIKAILIDGKPLLPPVQDSTMSLAQALMDYAKRYAPDPNFVALRL
SLKTGLDRNRLEKGTLTRQELRILYKAVADLLGRERLPIAMPV
>Mature_202_residues
AIRTLSSVIEQHIAGLPGLIAVLIGRATDGATVAKVTYVSDSQEEQALERLGTYAGDLLQANSRLCQTVSPDQEADYLLA
GTPALRVVIKAFPKSPYFVLFLTRSITDLRAISERIKAILIDGKPLLPPVQDSTMSLAQALMDYAKRYAPDPNFVALRLS
LKTGLDRNRLEKGTLTRQELRILYKAVADLLGRERLPIAMPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22260; Mature: 22129

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRTLSSVIEQHIAGLPGLIAVLIGRATDGATVAKVTYVSDSQEEQALERLGTYAGDLL
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
QANSRLCQTVSPDQEADYLLAGTPALRVVIKAFPKSPYFVLFLTRSITDLRAISERIKAI
HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEE
LIDGKPLLPPVQDSTMSLAQALMDYAKRYAPDPNFVALRLSLKTGLDRNRLEKGTLTRQE
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHHHCCCCHHH
LRILYKAVADLLGRERLPIAMPV
HHHHHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure 
AIRTLSSVIEQHIAGLPGLIAVLIGRATDGATVAKVTYVSDSQEEQALERLGTYAGDLL
CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
QANSRLCQTVSPDQEADYLLAGTPALRVVIKAFPKSPYFVLFLTRSITDLRAISERIKAI
HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEE
LIDGKPLLPPVQDSTMSLAQALMDYAKRYAPDPNFVALRLSLKTGLDRNRLEKGTLTRQE
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHHHCCCCHHH
LRILYKAVADLLGRERLPIAMPV
HHHHHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA