Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608000

Identifier: 86608000

GI number: 86608000

Start: 518074

End: 518244

Strand: Direct

Name: 86608000

Synonym: CYB_0506

Alternate gene names: NA

Gene position: 518074-518244 (Clockwise)

Preceding gene: 86607999

Following gene: 86608002

Centisome position: 17.0

GC content: 50.29

Gene sequence:

>171_bases
ATGTCACCCGTTGATGGAGCTAGAACCATGGAAAACCAAGAAGCTAAGTTTGGCTTTACCACCTTCGCCGAAAAATGGAA
TGGCCGTTTGGCAATGTTGGGCTTTGTGATTGGCGTTGCGACCGAGTTGCTGACCGGCCAAGGGATCCTCTCTCAAATCG
GCCTGATGTAA

Upstream 100 bases:

>100_bases
TCATCGACGCCCTCTGGACAACCGTGAAAAGCAGCTAGGGATCCCTTGTTAGCTCTCGACATAAAACTTGACACTTTTTA
ATATCTGAGCCACATTAAAG

Downstream 100 bases:

>100_bases
TCCCGGTGGGCCTACGACACTGCTGTAGATCCTTGCTTGCCTGGCTGTAGTTTCCACCCTCTGCAAAGCAGCCAGGCTTT
CGCATTGCCCTCGATTCTGG

Product: CAB/ELIP/HLIP family protein

Products: NA

Alternate protein names: High Light Inducible Protein; Lhc-Like; CAB/ELIP/HLIP Superfamily Protein; Ferrochelatase; High Light Inducible Polypeptide HliC; Conserved Domain Protein

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MSPVDGARTMENQEAKFGFTTFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM

Sequences:

>Translated_56_residues
MSPVDGARTMENQEAKFGFTTFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM
>Mature_55_residues
SPVDGARTMENQEAKFGFTTFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6035; Mature: 5904

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVDGARTMENQEAKFGFTTFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure 
SPVDGARTMENQEAKFGFTTFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM
CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA