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The map label for this gene is speA [H]

Identifier: 86607976

GI number: 86607976

Start: 493690

End: 495231

Strand: Reverse

Name: speA [H]

Synonym: CYB_0482

Alternate gene names: 86607976

Gene position: 495231-493690 (Counterclockwise)

Preceding gene: 86607978

Following gene: 86607973

Centisome position: 16.25

GC content: 59.92

Gene sequence:

>1542_bases
GTGGTTCTGTCCAATCTGTCCAAAACCTCTCGTTGCTTGCGCTCGCTGGATCGCAAAGCCCAGGAGCGAGCACCTCTATT
TGAGGCCATCCGCCACTATTGCAGCTTGGATAAGGCTCCTTTTCACACGCCAGGCCACAAACAGGGACGTGGGATCCCTG
CCGACTTGCGGACCTTTTTGGGAGAGAACGTCTTCCGGGCGGATCTGACCGAGTTGCCAGAGGTGGACAACCTCCACGAT
CCCGATGGCGTGATCCGAGAGGCCCAGGAGCTGGCGGCAGCAGCTTATGGAGCGGATCGCAGTTGGTTTTTGGTCAACGG
TTCCACCTGTGGCGTGGAAACACTGGTGATGGCGGTGTGCGATCCGGGAGACAAGATCCTCTTGCCGCGCAACTGCCACA
AATCCGCCATTGCCGGGGTGATCCTCTCTGGGGCGGTGCCGGCCTATATCGAGCCGGATTTTGACCCGGAGCTGGGCATT
GCCCACGGGATTACCCCAGCCGGTTTGGAGGGGGCCTTGGCGGAGCATCCCGATGCCAAAGGCGTTTTGGTAGTCAGCCC
CACCTACTACGGGGTTTGCTGCGACCTGGAATCTCTGGCAGCCATCGCCCATGCCCACGGCCTGCCGCTATTGGTGGACG
AGGCCCACGGGCCCCATTTTGGGTTTCATTCGGAATTGCCCATCTCGGCCCTGGAAGCCGGAGCCGATCTGGTGGTGCAG
TCCACCCACAAGGTGATCTCCGGCATGACGCAAGCCTCGCTGCTCCACCTGCAGGGATCCCGTATCGACCCCAACCGGGT
GCGCAACGTTCTGCAACTGCTGCAATCGACCAGTCCCAGCTATGTGCTGATGATGTCGCTGGATGTGGCGCGGCGGCAGA
TGGCACTGGAGGGAGAAGCCCTGCTGGGCCAAGCCTTGGCTTTGGCAGATCAAGCCCGCGCCCGTCTCAACCGCATCCCC
GGCTTGCGCTGTTTTGGCCCAGAGCGTATCGGCTCCACCCCTGGTTTTTTCGATTTCGACCGCACCCGTCTCACGGTAAC
GGTGACAGAGCTGGGGTTGTTCGGCTTCGATGCTCACGACTGGGTTAACGATCACTTCCACGTGCAGCCGGAGATGTCCA
CCCTGCACAATGTGGTCTTCATTGTCAGCATCGGCAATACCCAGCGAGACATTGACCGCCTGGTGGAAAGTTTCGCCGCC
CTGTCGCAACATTTTCAGGGATCCCGCCCATCCAGAGCGGCAATGGAAAAAATGCAGCGGCTGGCACAACTGCCCCGTCC
TTGCTTGCCACCACAACGGCTATCACCCCGGGAGGCTTTTTTTGCTCCCATTCAGCGGGTGCCTTTCCAAGAAGCAGTGG
GCCATATCTGCGCCGAGATCATCTCCCCCTATCCACCTGGGATCCCGATTTTGGTGCCGGGAGAAGAGGTGACTCAAGAG
GCGGTGAACTATCTGCTGTTGGTGCATGAGGCAGGCGGCTTTATCAACGGCCCAGAGGATGTGCGCCTACAAACCCTGAA
GGTGGTCAAAGCAACGGCCTAG

Upstream 100 bases:

>100_bases
CTGAAAACCCAGGCTAGCAGGAAAAGCGCCAGCGGTGGACTTAGCCTCCATTGGGATGGATAATCACAAAATGCCCACCT
GGTGTGTTGAGGAGTGGTCT

Downstream 100 bases:

>100_bases
TCCTCTCCAGCAGGTTTATGGACGGGTTTTTGCCGTTTGCGCCGGGGGGAGCAGCGGTAGGGAGTTTGCCGGAGTGCCGG
GGCGGCGGGCTACCTTCACC

Product: Orn/Lys/Arg decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MVLSNLSKTSRCLRSLDRKAQERAPLFEAIRHYCSLDKAPFHTPGHKQGRGIPADLRTFLGENVFRADLTELPEVDNLHD
PDGVIREAQELAAAAYGADRSWFLVNGSTCGVETLVMAVCDPGDKILLPRNCHKSAIAGVILSGAVPAYIEPDFDPELGI
AHGITPAGLEGALAEHPDAKGVLVVSPTYYGVCCDLESLAAIAHAHGLPLLVDEAHGPHFGFHSELPISALEAGADLVVQ
STHKVISGMTQASLLHLQGSRIDPNRVRNVLQLLQSTSPSYVLMMSLDVARRQMALEGEALLGQALALADQARARLNRIP
GLRCFGPERIGSTPGFFDFDRTRLTVTVTELGLFGFDAHDWVNDHFHVQPEMSTLHNVVFIVSIGNTQRDIDRLVESFAA
LSQHFQGSRPSRAAMEKMQRLAQLPRPCLPPQRLSPREAFFAPIQRVPFQEAVGHICAEIISPYPPGIPILVPGEEVTQE
AVNYLLLVHEAGGFINGPEDVRLQTLKVVKATA

Sequences:

>Translated_513_residues
MVLSNLSKTSRCLRSLDRKAQERAPLFEAIRHYCSLDKAPFHTPGHKQGRGIPADLRTFLGENVFRADLTELPEVDNLHD
PDGVIREAQELAAAAYGADRSWFLVNGSTCGVETLVMAVCDPGDKILLPRNCHKSAIAGVILSGAVPAYIEPDFDPELGI
AHGITPAGLEGALAEHPDAKGVLVVSPTYYGVCCDLESLAAIAHAHGLPLLVDEAHGPHFGFHSELPISALEAGADLVVQ
STHKVISGMTQASLLHLQGSRIDPNRVRNVLQLLQSTSPSYVLMMSLDVARRQMALEGEALLGQALALADQARARLNRIP
GLRCFGPERIGSTPGFFDFDRTRLTVTVTELGLFGFDAHDWVNDHFHVQPEMSTLHNVVFIVSIGNTQRDIDRLVESFAA
LSQHFQGSRPSRAAMEKMQRLAQLPRPCLPPQRLSPREAFFAPIQRVPFQEAVGHICAEIISPYPPGIPILVPGEEVTQE
AVNYLLLVHEAGGFINGPEDVRLQTLKVVKATA
>Mature_513_residues
MVLSNLSKTSRCLRSLDRKAQERAPLFEAIRHYCSLDKAPFHTPGHKQGRGIPADLRTFLGENVFRADLTELPEVDNLHD
PDGVIREAQELAAAAYGADRSWFLVNGSTCGVETLVMAVCDPGDKILLPRNCHKSAIAGVILSGAVPAYIEPDFDPELGI
AHGITPAGLEGALAEHPDAKGVLVVSPTYYGVCCDLESLAAIAHAHGLPLLVDEAHGPHFGFHSELPISALEAGADLVVQ
STHKVISGMTQASLLHLQGSRIDPNRVRNVLQLLQSTSPSYVLMMSLDVARRQMALEGEALLGQALALADQARARLNRIP
GLRCFGPERIGSTPGFFDFDRTRLTVTVTELGLFGFDAHDWVNDHFHVQPEMSTLHNVVFIVSIGNTQRDIDRLVESFAA
LSQHFQGSRPSRAAMEKMQRLAQLPRPCLPPQRLSPREAFFAPIQRVPFQEAVGHICAEIISPYPPGIPILVPGEEVTQE
AVNYLLLVHEAGGFINGPEDVRLQTLKVVKATA

Specific function: Catalyzes the formation of agmatine from arginine [H]

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

Organism=Escherichia coli, GI221142684, Length=593, Percent_Identity=25.6323777403035, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1790573, Length=568, Percent_Identity=23.5915492957746, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1786384, Length=579, Percent_Identity=23.6614853195164, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI87082193, Length=587, Percent_Identity=24.5315161839864, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1786909, Length=594, Percent_Identity=24.4107744107744, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 55809; Mature: 55809

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00703 OKR_DC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSNLSKTSRCLRSLDRKAQERAPLFEAIRHYCSLDKAPFHTPGHKQGRGIPADLRTFL
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
GENVFRADLTELPEVDNLHDPDGVIREAQELAAAAYGADRSWFLVNGSTCGVETLVMAVC
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHC
DPGDKILLPRNCHKSAIAGVILSGAVPAYIEPDFDPELGIAHGITPAGLEGALAEHPDAK
CCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHCCCCCC
GVLVVSPTYYGVCCDLESLAAIAHAHGLPLLVDEAHGPHFGFHSELPISALEAGADLVVQ
EEEEECCCCEEEEECHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHCCCHHHHH
STHKVISGMTQASLLHLQGSRIDPNRVRNVLQLLQSTSPSYVLMMSLDVARRQMALEGEA
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCHH
LLGQALALADQARARLNRIPGLRCFGPERIGSTPGFFDFDRTRLTVTVTELGLFGFDAHD
HHHHHHHHHHHHHHHHHHCCCCEECCHHHCCCCCCCCCCCCCEEEEEEEHHCEECCCHHH
WVNDHFHVQPEMSTLHNVVFIVSIGNTQRDIDRLVESFAALSQHFQGSRPSRAAMEKMQR
HCCCCEEECCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAQLPRPCLPPQRLSPREAFFAPIQRVPFQEAVGHICAEIISPYPPGIPILVPGEEVTQE
HHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHH
AVNYLLLVHEAGGFINGPEDVRLQTLKVVKATA
HHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLSNLSKTSRCLRSLDRKAQERAPLFEAIRHYCSLDKAPFHTPGHKQGRGIPADLRTFL
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
GENVFRADLTELPEVDNLHDPDGVIREAQELAAAAYGADRSWFLVNGSTCGVETLVMAVC
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHC
DPGDKILLPRNCHKSAIAGVILSGAVPAYIEPDFDPELGIAHGITPAGLEGALAEHPDAK
CCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHCCCCCC
GVLVVSPTYYGVCCDLESLAAIAHAHGLPLLVDEAHGPHFGFHSELPISALEAGADLVVQ
EEEEECCCCEEEEECHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHCCCHHHHH
STHKVISGMTQASLLHLQGSRIDPNRVRNVLQLLQSTSPSYVLMMSLDVARRQMALEGEA
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCHH
LLGQALALADQARARLNRIPGLRCFGPERIGSTPGFFDFDRTRLTVTVTELGLFGFDAHD
HHHHHHHHHHHHHHHHHHCCCCEECCHHHCCCCCCCCCCCCCEEEEEEEHHCEECCCHHH
WVNDHFHVQPEMSTLHNVVFIVSIGNTQRDIDRLVESFAALSQHFQGSRPSRAAMEKMQR
HCCCCEEECCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAQLPRPCLPPQRLSPREAFFAPIQRVPFQEAVGHICAEIISPYPPGIPILVPGEEVTQE
HHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHH
AVNYLLLVHEAGGFINGPEDVRLQTLKVVKATA
HHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969500; 9384377; 1697575; 1936936 [H]