Click here to switch to the map view.

The map label for this gene is ppdD [C]

Identifier: 86607969

GI number: 86607969

Start: 484805

End: 485320

Strand: Reverse

Name: ppdD [C]

Synonym: CYB_0475

Alternate gene names: 86607969

Gene position: 485320-484805 (Counterclockwise)

Preceding gene: 86607972

Following gene: 86607964

Centisome position: 15.93

GC content: 52.33

Gene sequence:

>516_bases
ATGAGTGCAAAGTCTCGTCAGTCTCTGTTGCGGGCCAAACTGGCTCAGCAAATTCTCTCCAAAGCCAAGGGCTTCACCCT
GATTGAGCTGTTGGTGGTGATTGTAATTGTGGGTGTGCTGTCTGCAGTGGCAATCCCGCAGTTCTTAAACCAAGTGCGCC
GCTCCCGTACAGCCGAAGCTCAAGCGGCTCTCACTGAAGTAGGCCGTGCCTCTGAAGTCTACCGACTCGACTTCGGCGTC
TATCCTGACAAGTATGTTAGGATCAAGTACGCTGGAGACTATACTGACAAGTACATGAACGATCCGTGGAGGGCTCCCAA
CTACCAAGATCCAGTGCCTACTGAACGTTCGACCACTGCTCCTCACGCACTAAGGTGGGACACAACATCCAACGGTGCTC
CATACATCACCAGGTCTGGCAGCAAAATTCAATGCACCATTGGGCTGGGAGCGCAGGAGGCAGCTGTGACTTCTCTGGAT
ACCTTCGTTGGTAAGAGCTGTAACGTCTTTCAATAA

Upstream 100 bases:

>100_bases
AGGGAGCAGGCTGTTATGAATCGCCCTTGAGCGGGGTAAGTTAGCACTAGCAGGTGAGCTGCACAGTTAACTCTCTAGTT
TGCTAAAGGATCTGGTACTC

Downstream 100 bases:

>100_bases
TTTCTCTTTTCACTTCAAGTACTCCATGGCTCCCTATAGGGAGCCTTTTTCTTACCCTGACTAGTCTCGCACTGGAGAGC
GGATAAGAGCTCAGACTAAA

Product: general secretion pathway protein G

Products: NA

Alternate protein names: Pilin Domain-Containing Protein; General Secretion Pathway Protein G

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSAKSRQSLLRAKLAQQILSKAKGFTLIELLVVIVIVGVLSAVAIPQFLNQVRRSRTAEAQAALTEVGRASEVYRLDFGV
YPDKYVRIKYAGDYTDKYMNDPWRAPNYQDPVPTERSTTAPHALRWDTTSNGAPYITRSGSKIQCTIGLGAQEAAVTSLD
TFVGKSCNVFQ

Sequences:

>Translated_171_residues
MSAKSRQSLLRAKLAQQILSKAKGFTLIELLVVIVIVGVLSAVAIPQFLNQVRRSRTAEAQAALTEVGRASEVYRLDFGV
YPDKYVRIKYAGDYTDKYMNDPWRAPNYQDPVPTERSTTAPHALRWDTTSNGAPYITRSGSKIQCTIGLGAQEAAVTSLD
TFVGKSCNVFQ
>Mature_170_residues
SAKSRQSLLRAKLAQQILSKAKGFTLIELLVVIVIVGVLSAVAIPQFLNQVRRSRTAEAQAALTEVGRASEVYRLDFGVY
PDKYVRIKYAGDYTDKYMNDPWRAPNYQDPVPTERSTTAPHALRWDTTSNGAPYITRSGSKIQCTIGLGAQEAAVTSLDT
FVGKSCNVFQ

Specific function: Not Yet Known. [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18847; Mature: 18716

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKSRQSLLRAKLAQQILSKAKGFTLIELLVVIVIVGVLSAVAIPQFLNQVRRSRTAEA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAALTEVGRASEVYRLDFGVYPDKYVRIKYAGDYTDKYMNDPWRAPNYQDPVPTERSTTA
HHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PHALRWDTTSNGAPYITRSGSKIQCTIGLGAQEAAVTSLDTFVGKSCNVFQ
CCEEEECCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAKSRQSLLRAKLAQQILSKAKGFTLIELLVVIVIVGVLSAVAIPQFLNQVRRSRTAEA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAALTEVGRASEVYRLDFGVYPDKYVRIKYAGDYTDKYMNDPWRAPNYQDPVPTERSTTA
HHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PHALRWDTTSNGAPYITRSGSKIQCTIGLGAQEAAVTSLDTFVGKSCNVFQ
CCEEEECCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA