| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607942
Identifier: 86607942
GI number: 86607942
Start: 455204
End: 455479
Strand: Reverse
Name: 86607942
Synonym: CYB_0447
Alternate gene names: NA
Gene position: 455479-455204 (Counterclockwise)
Preceding gene: 86607943
Following gene: 86607941
Centisome position: 14.95
GC content: 60.14
Gene sequence:
>276_bases ATGCCAGACTACAAGGCTCTCGCCCATCTTTTGATCGAACCGCTGCTCAGCAGCGCCTCTCTTCAAATGGATGTGGAAAC CACCTGTGGCGGGCGAAAGGTATGGCTGCGGCTGGCCTTTGACCCGAAGGATCGGGGGCGGGTATTCGGGCGGGGCGGGC GCACCCTGCAAGCGATTCGACAGGTGATGATGGCCGCAGCTCAGTTGGCAGGTCAATCTCTGTACATCGATATCTACGGA GAGGCGGGAGAGCGGAATCGGGAGGAGCGGGAATGA
Upstream 100 bases:
>100_bases GAAGCTGAAGTTGAAAAGCCTCAGGTTGAGGAAGCGGTTGAGGCCTAGGGTCGGCTAAGCTTGGCTTGGCCAGTTGTTCC CTCCTGTCGTCTAGCTCTCT
Downstream 100 bases:
>100_bases GCCAAATTCTCACCTTTCTGGGCAAGGGGGGCACAGGTCGGAGCACCTTGGCCGTGGCGGCAGCTCGGGCCGCAGCCCAG CAGGGGCGGCGGGTGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MPDYKALAHLLIEPLLSSASLQMDVETTCGGRKVWLRLAFDPKDRGRVFGRGGRTLQAIRQVMMAAAQLAGQSLYIDIYG EAGERNREERE
Sequences:
>Translated_91_residues MPDYKALAHLLIEPLLSSASLQMDVETTCGGRKVWLRLAFDPKDRGRVFGRGGRTLQAIRQVMMAAAQLAGQSLYIDIYG EAGERNREERE >Mature_90_residues PDYKALAHLLIEPLLSSASLQMDVETTCGGRKVWLRLAFDPKDRGRVFGRGGRTLQAIRQVMMAAAQLAGQSLYIDIYGE AGERNREERE
Specific function: Unknown
COG id: COG1837
COG function: function code R; Predicted RNA-binding protein (contains KH domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10195; Mature: 10064
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDYKALAHLLIEPLLSSASLQMDVETTCGGRKVWLRLAFDPKDRGRVFGRGGRTLQAIR CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCCCCCEECCCCCHHHHHH QVMMAAAQLAGQSLYIDIYGEAGERNREERE HHHHHHHHHCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure PDYKALAHLLIEPLLSSASLQMDVETTCGGRKVWLRLAFDPKDRGRVFGRGGRTLQAIR CCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCCCCCEECCCCCHHHHHH QVMMAAAQLAGQSLYIDIYGEAGERNREERE HHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA