| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86607909
Identifier: 86607909
GI number: 86607909
Start: 423286
End: 423645
Strand: Reverse
Name: 86607909
Synonym: CYB_0412
Alternate gene names: NA
Gene position: 423645-423286 (Counterclockwise)
Preceding gene: 86607910
Following gene: 86607908
Centisome position: 13.91
GC content: 59.17
Gene sequence:
>360_bases ATGACTTATCCCTACCCTTCTCTTCCCTTTCCCAGAGTCGGCAACCCTTTGGGATGGCTCGGCCTGGTTTTGAACTCAAT TTTCAGATCCGCCCTGAAGTGGCCGCGCCGCTGGCTCAACAGCATTGAAATTCGGGGATCCCGGCAGGCCCGTTGGATTT GTCGTTTGATCCCGGCTTCCTGTCCCTTTGAGCGGGATATCCGACTGGGATCCCGCACCATCCACATTCCGGCCCTCTGT CGCATCAACCCCCTCTACGAGGAGATCATCGCCCTGCGGCTACGGGCGGCGGCTTATCTGGCCGAAGCTGCGGCTCAACC CCAGCCCCCCTCTTCTCAGGAGATCCCATCATGCCTTTGA
Upstream 100 bases:
>100_bases GCATTACGGGCTGATTTCTTTGGAGCAACTGGAGCAGATTTTTGAATGGTGTGCTCCCCCTCCTCTTGTTACCAATTCTA CCCATTCGGAGGTTTAAGCC
Downstream 100 bases:
>100_bases TCAGCCGGACTAAAGTGGCGGAGCTGCTCAACGAGACCGCCTGCGAGCACAACCACAAGAAAGACGGCAAAGGCAAAAAC AAAGTCTGTGCCGAGCAAGC
Product: molybdenum-dependent nitrogenase
Products: NA
Alternate protein names: Mo-Dependent Nitrogenase-Like Protein; Mo-Dependent Nitrogenase C-Terminal Domain Family Protein
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTYPYPSLPFPRVGNPLGWLGLVLNSIFRSALKWPRRWLNSIEIRGSRQARWICRLIPASCPFERDIRLGSRTIHIPALC RINPLYEEIIALRLRAAAYLAEAAAQPQPPSSQEIPSCL
Sequences:
>Translated_119_residues MTYPYPSLPFPRVGNPLGWLGLVLNSIFRSALKWPRRWLNSIEIRGSRQARWICRLIPASCPFERDIRLGSRTIHIPALC RINPLYEEIIALRLRAAAYLAEAAAQPQPPSSQEIPSCL >Mature_118_residues TYPYPSLPFPRVGNPLGWLGLVLNSIFRSALKWPRRWLNSIEIRGSRQARWICRLIPASCPFERDIRLGSRTIHIPALCR INPLYEEIIALRLRAAAYLAEAAAQPQPPSSQEIPSCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13536; Mature: 13405
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPYPSLPFPRVGNPLGWLGLVLNSIFRSALKWPRRWLNSIEIRGSRQARWICRLIPAS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC CPFERDIRLGSRTIHIPALCRINPLYEEIIALRLRAAAYLAEAAAQPQPPSSQEIPSCL CCCCCCCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TYPYPSLPFPRVGNPLGWLGLVLNSIFRSALKWPRRWLNSIEIRGSRQARWICRLIPAS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC CPFERDIRLGSRTIHIPALCRINPLYEEIIALRLRAAAYLAEAAAQPQPPSSQEIPSCL CCCCCCCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA