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The map label for this gene is nifN [H]

Identifier: 86607907

GI number: 86607907

Start: 420564

End: 421901

Strand: Reverse

Name: nifN [H]

Synonym: CYB_0410

Alternate gene names: 86607907

Gene position: 421901-420564 (Counterclockwise)

Preceding gene: 86607908

Following gene: 86607906

Centisome position: 13.85

GC content: 64.05

Gene sequence:

>1338_bases
ATGGCCCAGCTCATCCAAGAACGCAAGCCTCTCAGCGTCAACCCCCTCAAACTCAGCGCTCCGCTGGGAGCGGCCCTGGC
CTTTCTGGGGATCAAGGGCTGTCTGCCCCTCTTCCACGGTTCCCAAGGCTGTACGGCCTTTGCCAAAGCGCTGCTGGTAC
GTCATTTCCGCGAGGCCATTCCCATGTCCACCACTGCCATGTCCGAAGTGGACACCATCTTGGGGGGGGAGGAGAATGTC
GAAGCTGCCATCCTCACCTTGGTGGAGAAGGCCCAGCCGGAGCTGATTGGTCTTCTGACCACCGGCCTCACGGAAACCCG
CGGGGACGATATGCCGCGCATCCTGCGGGAGCTGCGCCGACGCCAGCCGCAATTGCAGGATCTGCCCATCGTCTTGGCCT
CCACGCCTGACTTTAAAGGATCCCTGCAAGACGGCTATGCCATCGCCGTCAACAGCTTGGTCAGCACCCTGCCGGAATCG
CCGTCGGGATCCGTCCGCCCTGCCCAGGTAACGGTGCTGTGCGGGCCTGCCCTCACCCCTGCCGACGCCCAGGAGATCAA
AGAAATGGCGGAGGCTTTTGGCCTAGAGCCGATCCTGGTGCCGGATCCCGCGGGTTCCCTGGACGGACACTTGGGCACCG
GCTTTAGGGCGACCCCAGACGGCGGCACCACCCTTGAGCAATTGCGCCAGCTCGGGCGTTCCGGCCTCACCATAGCTGTC
GGCGAGAGCATGCGCCCTGCCGCTCAGATCCTGGCCCAGCGCTTTGGCACCCCCTATCGGGTTTTCCCCCACCTGACCGG
TCTCAAGGCTGTGGATCCCTTTTTGGCAACCTTGGCCGATCACAGCCAGCAGCCGGTGCCCTCTCGCTACCGCCGCCAGC
GCAGCCAAGTCCAGGATGCCCTCCTGGATTGCCACTTTTTCTTCGGCAACCAGCGGATTGCCTTGGCCCTAGAAGCCGAT
CTGCTCTGGGGGTGGGTGGACTGGCTGCTGGATATGGGCTGTCAGATCCAGGCGGCCATCAGTCCCACACCGGATCCCCA
CTTGACCACCCTTCCCATTGAGGCAGTGCGGGTGGGAGATCTGGGGGATCTGGAGGAGCTAGCACCCGGGGCTGACCTGC
TGGTGGGCAACTCCCACGTGGCGCGCCTGGGCAAGCGGCTGGGGATCCCGGTGCATCGGATGGGGATCCCCATCTTCGAC
CGGCTGGGGGCCAACCACCTCTGTCAGGTGGGCTATCGCGGCACCCTATCCCAACTGTTTGCTGTCGGCAACCTGCTGAT
GGAGCAGGAGGAAGCCCGTCACCCCAGCCCACCCCAGGTTTCTGGGCATGGATTCTAA

Upstream 100 bases:

>100_bases
ACTTGGCGCGGGAGATCGATGCCGCCCTCCACAGCCCCATCTGGGAGCAGTTGCGACGGCCTGCCCCCTGGGAGACTCCA
GCCGAAGAGGAGGTGGGATG

Downstream 100 bases:

>100_bases
GGGATCCAGAGCTTCGAAGGGCAGCCCAAGTGCCCCTAGCTCCCCCAAACCCTCAAGTTCACGTTTCTAAGGAGAACGCC
TATGCAAGTGGCCTTTACAA

Product: nitrogenase molybdenum-cofactor biosynthesis protein NifN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MAQLIQERKPLSVNPLKLSAPLGAALAFLGIKGCLPLFHGSQGCTAFAKALLVRHFREAIPMSTTAMSEVDTILGGEENV
EAAILTLVEKAQPELIGLLTTGLTETRGDDMPRILRELRRRQPQLQDLPIVLASTPDFKGSLQDGYAIAVNSLVSTLPES
PSGSVRPAQVTVLCGPALTPADAQEIKEMAEAFGLEPILVPDPAGSLDGHLGTGFRATPDGGTTLEQLRQLGRSGLTIAV
GESMRPAAQILAQRFGTPYRVFPHLTGLKAVDPFLATLADHSQQPVPSRYRRQRSQVQDALLDCHFFFGNQRIALALEAD
LLWGWVDWLLDMGCQIQAAISPTPDPHLTTLPIEAVRVGDLGDLEELAPGADLLVGNSHVARLGKRLGIPVHRMGIPIFD
RLGANHLCQVGYRGTLSQLFAVGNLLMEQEEARHPSPPQVSGHGF

Sequences:

>Translated_445_residues
MAQLIQERKPLSVNPLKLSAPLGAALAFLGIKGCLPLFHGSQGCTAFAKALLVRHFREAIPMSTTAMSEVDTILGGEENV
EAAILTLVEKAQPELIGLLTTGLTETRGDDMPRILRELRRRQPQLQDLPIVLASTPDFKGSLQDGYAIAVNSLVSTLPES
PSGSVRPAQVTVLCGPALTPADAQEIKEMAEAFGLEPILVPDPAGSLDGHLGTGFRATPDGGTTLEQLRQLGRSGLTIAV
GESMRPAAQILAQRFGTPYRVFPHLTGLKAVDPFLATLADHSQQPVPSRYRRQRSQVQDALLDCHFFFGNQRIALALEAD
LLWGWVDWLLDMGCQIQAAISPTPDPHLTTLPIEAVRVGDLGDLEELAPGADLLVGNSHVARLGKRLGIPVHRMGIPIFD
RLGANHLCQVGYRGTLSQLFAVGNLLMEQEEARHPSPPQVSGHGF
>Mature_444_residues
AQLIQERKPLSVNPLKLSAPLGAALAFLGIKGCLPLFHGSQGCTAFAKALLVRHFREAIPMSTTAMSEVDTILGGEENVE
AAILTLVEKAQPELIGLLTTGLTETRGDDMPRILRELRRRQPQLQDLPIVLASTPDFKGSLQDGYAIAVNSLVSTLPESP
SGSVRPAQVTVLCGPALTPADAQEIKEMAEAFGLEPILVPDPAGSLDGHLGTGFRATPDGGTTLEQLRQLGRSGLTIAVG
ESMRPAAQILAQRFGTPYRVFPHLTGLKAVDPFLATLADHSQQPVPSRYRRQRSQVQDALLDCHFFFGNQRIALALEADL
LWGWVDWLLDMGCQIQAAISPTPDPHLTTLPIEAVRVGDLGDLEELAPGADLLVGNSHVARLGKRLGIPVHRMGIPIFDR
LGANHLCQVGYRGTLSQLFAVGNLLMEQEEARHPSPPQVSGHGF

Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000510
- InterPro:   IPR000318
- InterPro:   IPR005975 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 47854; Mature: 47723

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00699 NITROGENASE_1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLIQERKPLSVNPLKLSAPLGAALAFLGIKGCLPLFHGSQGCTAFAKALLVRHFREAI
CCCHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
PMSTTAMSEVDTILGGEENVEAAILTLVEKAQPELIGLLTTGLTETRGDDMPRILRELRR
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
RQPQLQDLPIVLASTPDFKGSLQDGYAIAVNSLVSTLPESPSGSVRPAQVTVLCGPALTP
CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
ADAQEIKEMAEAFGLEPILVPDPAGSLDGHLGTGFRATPDGGTTLEQLRQLGRSGLTIAV
CCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEE
GESMRPAAQILAQRFGTPYRVFPHLTGLKAVDPFLATLADHSQQPVPSRYRRQRSQVQDA
CCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LLDCHFFFGNQRIALALEADLLWGWVDWLLDMGCQIQAAISPTPDPHLTTLPIEAVRVGD
HHHHHHEECCCEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCHHEEEECC
LGDLEELAPGADLLVGNSHVARLGKRLGIPVHRMGIPIFDRLGANHLCQVGYRGTLSQLF
CCCHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHCCCCHHHHHHH
AVGNLLMEQEEARHPSPPQVSGHGF
HHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AQLIQERKPLSVNPLKLSAPLGAALAFLGIKGCLPLFHGSQGCTAFAKALLVRHFREAI
CCHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
PMSTTAMSEVDTILGGEENVEAAILTLVEKAQPELIGLLTTGLTETRGDDMPRILRELRR
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
RQPQLQDLPIVLASTPDFKGSLQDGYAIAVNSLVSTLPESPSGSVRPAQVTVLCGPALTP
CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
ADAQEIKEMAEAFGLEPILVPDPAGSLDGHLGTGFRATPDGGTTLEQLRQLGRSGLTIAV
CCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEE
GESMRPAAQILAQRFGTPYRVFPHLTGLKAVDPFLATLADHSQQPVPSRYRRQRSQVQDA
CCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LLDCHFFFGNQRIALALEADLLWGWVDWLLDMGCQIQAAISPTPDPHLTTLPIEAVRVGD
HHHHHHEECCCEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCHHEEEECC
LGDLEELAPGADLLVGNSHVARLGKRLGIPVHRMGIPIFDRLGANHLCQVGYRGTLSQLF
CCCHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHCCCCHHHHHHH
AVGNLLMEQEEARHPSPPQVSGHGF
HHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]