Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86607900

Identifier: 86607900

GI number: 86607900

Start: 417808

End: 418065

Strand: Reverse

Name: 86607900

Synonym: CYB_0403

Alternate gene names: NA

Gene position: 418065-417808 (Counterclockwise)

Preceding gene: 86607901

Following gene: 86607899

Centisome position: 13.72

GC content: 52.33

Gene sequence:

>258_bases
ATGAACACCTGTTTGTTGCACCTGGGCTCCATCCTTAAAGCTGCTGAAGAGCTTAGCCTTGTGGAAAAGCCATTTCCCAA
GTTGCAACACATTCAACTCTGCACAGGACTAAGCCCAGAGGAAATCGTGCGGGCGCTGGAGCTAGAACCCAATCCCTTGG
GTTGGCATCTAGAGCCAAGCCACAACCTTGCCGATGAATCGACGTATTGGGTGGGCGGACGACCTTGTGTCGGCTTGGTT
ATTGAGCGTTTTGCCTGA

Upstream 100 bases:

>100_bases
AAATGTAGTCTATTTACCCAATTTTTAACCTGTAATGAGGGACACTCAAAGTAAGGGAAGCTCATCTCTTCATAACCTAT
CTTGATTTGGGAGCAAAGCC

Downstream 100 bases:

>100_bases
CACTTGCTGCAGTTCGGATCCCCAAAAGGCTCTCAAGGGGGAGGAGTAGCCTGCAAAGCCATCTCAAAAGTTCACTGTAA
ACATTAGAAGTTAAGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MNTCLLHLGSILKAAEELSLVEKPFPKLQHIQLCTGLSPEEIVRALELEPNPLGWHLEPSHNLADESTYWVGGRPCVGLV
IERFA

Sequences:

>Translated_85_residues
MNTCLLHLGSILKAAEELSLVEKPFPKLQHIQLCTGLSPEEIVRALELEPNPLGWHLEPSHNLADESTYWVGGRPCVGLV
IERFA
>Mature_85_residues
MNTCLLHLGSILKAAEELSLVEKPFPKLQHIQLCTGLSPEEIVRALELEPNPLGWHLEPSHNLADESTYWVGGRPCVGLV
IERFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9457; Mature: 9457

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTCLLHLGSILKAAEELSLVEKPFPKLQHIQLCTGLSPEEIVRALELEPNPLGWHLEPS
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCC
HNLADESTYWVGGRPCVGLVIERFA
CCCCCCCEEEECCCCHHHHHHHHCC
>Mature Secondary Structure
MNTCLLHLGSILKAAEELSLVEKPFPKLQHIQLCTGLSPEEIVRALELEPNPLGWHLEPS
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCC
HNLADESTYWVGGRPCVGLVIERFA
CCCCCCCEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA