| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607858
Identifier: 86607858
GI number: 86607858
Start: 377266
End: 378450
Strand: Direct
Name: 86607858
Synonym: CYB_0361
Alternate gene names: NA
Gene position: 377266-378450 (Clockwise)
Preceding gene: 86607855
Following gene: 86607859
Centisome position: 12.38
GC content: 54.51
Gene sequence:
>1185_bases ATGGGTAGAGGCTCGCCCCTTCTTCTTCCTGCTTGTTCTCCGGCGAGGTATCTTGGGATGCCCAGGCCACCGGATCTCCT AACCCTGGCCCGAGCTGGACACGCCCAGTCGATTGTGCAGGTTGTGCGGATGGAGCTGCTGCGGCGTCGCTGGTGTGCCC GAGTAGACTTTGCCGACGAGACCCTGCACGTCCACCTGCTGGGATCCCTGTACCAGCCTGCGCTCTCCCCCCAAGTTGCT GCTGCCCAACTGTTTCTGATCTTGAAGCAACTGCGGATCCCACGGCTGGATCAAGTGGAGATTTGCGCTTTCCGCGGCTC ACGCTTGCTCTGGCGGCAGAGCCTAAAGCTGGGATCCCGGCAGCGTTGGGATCGGTTTTCCTTCGATAACTGGGCAGTCA ACGCCTGGGCTTACCCGGCTGCGTTTGCGGTGGCCCTGATGGTGAACAACATAGGCTTGTTGCAGTTGTTGCATTTGCCT CTTCACATTTGGATCCACGAATTTGGCCATGCCACCGTCGCCTGGTGGAGCGGGTATCGGGCTTTGCCTCTGCCCATCGG CTGGACAAGCGTTAGCTCGCAGAGGGATCCCTTTGTGTATTTTGGAATCCTCTTTTTACTGATTCTACTCTTCTGGTCAG CCCGCAAGGAGCGGATTGGGTGGCTGCAGGTGCTGGCCATCTTTCTTGCTCTATTGCAGTTTTACATGACCTGGCTGATG CCCAATCGCACCTGGGAGATGTTGTTTGTCTTTAGCGGCGTTGGAGGAGAATTTTATCTCAGCACCTTTTTGATGGCCAG CTTTTATTTTCCCCTGCCAGATCGTTGGCGATGGGACTCTTTGCGATTTGTCGTGCTGGGGATCGCGAGCAGCAACCTGT GGAGAAGCTTTTGGGAATGGCACAGCATCAGACTGGGATTGGCCGAGGTTCCCTGGGGAACTTTGTTGGGCGGCCAAGGA GATGCCAGGGGGGATATGAACCGCCTAAACTACGACTTTGGCTGGAGCACCGATCAAATCATCCAAACCTACACTTTTTT AGGAAACCTGTGTGTCTTATTCGCATTGAGCCTATACGTCCTATTCCTGTTGCGAGCAAACGATGAGACTTGGCTGTATC TGCGAGCAAGGTTTATTCTTTGGATGAATGGTTTGATAAGCTCCAGTTCAAGCAAACCTCCTTAA
Upstream 100 bases:
>100_bases ACCTTCCATCCACTCCCCACACCTGCAACTATACCAACCTGCTTTCGGAGCAGCCTGGGAAGGAGCGCAATTCCGCTCTT GCCTGCAGGGCTGGGGGATG
Downstream 100 bases:
>100_bases GATCCTCCTATAGCGATCATTATCCCAACCACAGCTTTTTTCGGCAGCGCCAGCTACATCCAGTGCAAAACTAGCTCTCG GGTAACAGGGATCCCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MGRGSPLLLPACSPARYLGMPRPPDLLTLARAGHAQSIVQVVRMELLRRRWCARVDFADETLHVHLLGSLYQPALSPQVA AAQLFLILKQLRIPRLDQVEICAFRGSRLLWRQSLKLGSRQRWDRFSFDNWAVNAWAYPAAFAVALMVNNIGLLQLLHLP LHIWIHEFGHATVAWWSGYRALPLPIGWTSVSSQRDPFVYFGILFLLILLFWSARKERIGWLQVLAIFLALLQFYMTWLM PNRTWEMLFVFSGVGGEFYLSTFLMASFYFPLPDRWRWDSLRFVVLGIASSNLWRSFWEWHSIRLGLAEVPWGTLLGGQG DARGDMNRLNYDFGWSTDQIIQTYTFLGNLCVLFALSLYVLFLLRANDETWLYLRARFILWMNGLISSSSSKPP
Sequences:
>Translated_394_residues MGRGSPLLLPACSPARYLGMPRPPDLLTLARAGHAQSIVQVVRMELLRRRWCARVDFADETLHVHLLGSLYQPALSPQVA AAQLFLILKQLRIPRLDQVEICAFRGSRLLWRQSLKLGSRQRWDRFSFDNWAVNAWAYPAAFAVALMVNNIGLLQLLHLP LHIWIHEFGHATVAWWSGYRALPLPIGWTSVSSQRDPFVYFGILFLLILLFWSARKERIGWLQVLAIFLALLQFYMTWLM PNRTWEMLFVFSGVGGEFYLSTFLMASFYFPLPDRWRWDSLRFVVLGIASSNLWRSFWEWHSIRLGLAEVPWGTLLGGQG DARGDMNRLNYDFGWSTDQIIQTYTFLGNLCVLFALSLYVLFLLRANDETWLYLRARFILWMNGLISSSSSKPP >Mature_393_residues GRGSPLLLPACSPARYLGMPRPPDLLTLARAGHAQSIVQVVRMELLRRRWCARVDFADETLHVHLLGSLYQPALSPQVAA AQLFLILKQLRIPRLDQVEICAFRGSRLLWRQSLKLGSRQRWDRFSFDNWAVNAWAYPAAFAVALMVNNIGLLQLLHLPL HIWIHEFGHATVAWWSGYRALPLPIGWTSVSSQRDPFVYFGILFLLILLFWSARKERIGWLQVLAIFLALLQFYMTWLMP NRTWEMLFVFSGVGGEFYLSTFLMASFYFPLPDRWRWDSLRFVVLGIASSNLWRSFWEWHSIRLGLAEVPWGTLLGGQGD ARGDMNRLNYDFGWSTDQIIQTYTFLGNLCVLFALSLYVLFLLRANDETWLYLRARFILWMNGLISSSSSKPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45579; Mature: 45448
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGSPLLLPACSPARYLGMPRPPDLLTLARAGHAQSIVQVVRMELLRRRWCARVDFADE CCCCCCEEEECCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TLHVHLLGSLYQPALSPQVAAAQLFLILKQLRIPRLDQVEICAFRGSRLLWRQSLKLGSR EEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCC QRWDRFSFDNWAVNAWAYPAAFAVALMVNNIGLLQLLHLPLHIWIHEFGHATVAWWSGYR CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECCCE ALPLPIGWTSVSSQRDPFVYFGILFLLILLFWSARKERIGWLQVLAIFLALLQFYMTWLM EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNRTWEMLFVFSGVGGEFYLSTFLMASFYFPLPDRWRWDSLRFVVLGIASSNLWRSFWEW CCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHH HSIRLGLAEVPWGTLLGGQGDARGDMNRLNYDFGWSTDQIIQTYTFLGNLCVLFALSLYV HHHEEEHHHCCCHHEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFLLRANDETWLYLRARFILWMNGLISSSSSKPP HHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GRGSPLLLPACSPARYLGMPRPPDLLTLARAGHAQSIVQVVRMELLRRRWCARVDFADE CCCCCEEEECCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TLHVHLLGSLYQPALSPQVAAAQLFLILKQLRIPRLDQVEICAFRGSRLLWRQSLKLGSR EEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCC QRWDRFSFDNWAVNAWAYPAAFAVALMVNNIGLLQLLHLPLHIWIHEFGHATVAWWSGYR CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECCCE ALPLPIGWTSVSSQRDPFVYFGILFLLILLFWSARKERIGWLQVLAIFLALLQFYMTWLM EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNRTWEMLFVFSGVGGEFYLSTFLMASFYFPLPDRWRWDSLRFVVLGIASSNLWRSFWEW CCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHH HSIRLGLAEVPWGTLLGGQGDARGDMNRLNYDFGWSTDQIIQTYTFLGNLCVLFALSLYV HHHEEEHHHCCCHHEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFLLRANDETWLYLRARFILWMNGLISSSSSKPP HHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA