Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607841

Identifier: 86607841

GI number: 86607841

Start: 362824

End: 363420

Strand: Reverse

Name: 86607841

Synonym: CYB_0344

Alternate gene names: NA

Gene position: 363420-362824 (Counterclockwise)

Preceding gene: 86607842

Following gene: 86607840

Centisome position: 11.93

GC content: 56.28

Gene sequence:

>597_bases
GTGGCATATTCGCGCCAATGTCTGCACCGGAAACCTCTCCACAGAAGAACTGGCGGAGCTGTTTCCATTGGTGAATCAAG
CTCTAGTGGATGCCGTTTGCCGGGGAGGAAGTTAAAGGTTGCCCAGGCTGGCGGTAAGGTGAAGAAGGAGCCTCTAGGTC
GCTGCTGCATGGATTTTGAGAAACTTTTGGAGGAATGGGTTGCAGCCTTTGCCCAAGTGGCCGAAGAAAGTTTGGCCTCT
TTGGAGACTGCCCTGATGGAGCTGGCAGAGCACTTGGCTGTGCCTTTACAGGAAACCCTTAGGCAGTGGGAAGCCCTCTG
GAATCTGGAGGAGGAAGTGGAGCTGGAGCCTGAGCCAGAACCCTTTGAGGAAACCCTCAACCCTTCTGGCGAATCTTTCA
CCACCAGTCGTTTCTTCGTCAGCCCGATAGGATTTGGGGGTGTGGTTGTTTACACTTACGTGGCTTCGCCGCCAGAATAC
ATCGGGGATCCCACCTGCCGCTACAATGCCCATTCTCCAGAGTTGCGCTGCGCCGTCAACCCCTGCGGCCCCTGTGAGGG
CTGTCCCCACTACGAGCCTCGGAATGAGCCCCGATGA

Upstream 100 bases:

>100_bases
ACCTTGGGTCGGGACGCAGCCTCCCTCGGGTACCTGTGGGCGGTTCAGGTTCTGAGGAGGGCCGGGATCCTGCTGCTCCT
TCGGCGCAAATGTGGGCAGA

Downstream 100 bases:

>100_bases
AGGGTGACCGCCTGATTGTTGCGCTGGATACTCCTTCTCAAGAGCAGGCTTTGGAGTGGGTGGACTCCTTGCCGCAGGTG
CTGTGGTGGAAGGTGGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAYSRQCLHRKPLHRRTGGAVSIGESSSSGCRLPGRKLKVAQAGGKVKKEPLGRCCMDFEKLLEEWVAAFAQVAEESLAS
LETALMELAEHLAVPLQETLRQWEALWNLEEEVELEPEPEPFEETLNPSGESFTTSRFFVSPIGFGGVVVYTYVASPPEY
IGDPTCRYNAHSPELRCAVNPCGPCEGCPHYEPRNEPR

Sequences:

>Translated_198_residues
MAYSRQCLHRKPLHRRTGGAVSIGESSSSGCRLPGRKLKVAQAGGKVKKEPLGRCCMDFEKLLEEWVAAFAQVAEESLAS
LETALMELAEHLAVPLQETLRQWEALWNLEEEVELEPEPEPFEETLNPSGESFTTSRFFVSPIGFGGVVVYTYVASPPEY
IGDPTCRYNAHSPELRCAVNPCGPCEGCPHYEPRNEPR
>Mature_197_residues
AYSRQCLHRKPLHRRTGGAVSIGESSSSGCRLPGRKLKVAQAGGKVKKEPLGRCCMDFEKLLEEWVAAFAQVAEESLASL
ETALMELAEHLAVPLQETLRQWEALWNLEEEVELEPEPEPFEETLNPSGESFTTSRFFVSPIGFGGVVVYTYVASPPEYI
GDPTCRYNAHSPELRCAVNPCGPCEGCPHYEPRNEPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21996; Mature: 21865

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSRQCLHRKPLHRRTGGAVSIGESSSSGCRLPGRKLKVAQAGGKVKKEPLGRCCMDFE
CCCCHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCCEEEHHHCCCCCCHHHHHHHHHHHH
KLLEEWVAAFAQVAEESLASLETALMELAEHLAVPLQETLRQWEALWNLEEEVELEPEPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCC
PFEETLNPSGESFTTSRFFVSPIGFGGVVVYTYVASPPEYIGDPTCRYNAHSPELRCAVN
HHHHHCCCCCCCEECCCEEECCCCCCCEEEEEEECCCHHHHCCCCEEECCCCCCEEEECC
PCGPCEGCPHYEPRNEPR
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AYSRQCLHRKPLHRRTGGAVSIGESSSSGCRLPGRKLKVAQAGGKVKKEPLGRCCMDFE
CCCHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCCEEEHHHCCCCCCHHHHHHHHHHHH
KLLEEWVAAFAQVAEESLASLETALMELAEHLAVPLQETLRQWEALWNLEEEVELEPEPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCC
PFEETLNPSGESFTTSRFFVSPIGFGGVVVYTYVASPPEYIGDPTCRYNAHSPELRCAVN
HHHHHCCCCCCCEECCCEEECCCCCCCEEEEEEECCCHHHHCCCCEEECCCCCCEEEECC
PCGPCEGCPHYEPRNEPR
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA