Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607838

Identifier: 86607838

GI number: 86607838

Start: 360079

End: 361053

Strand: Reverse

Name: 86607838

Synonym: CYB_0341

Alternate gene names: NA

Gene position: 361053-360079 (Counterclockwise)

Preceding gene: 86607839

Following gene: 86607837

Centisome position: 11.85

GC content: 60.72

Gene sequence:

>975_bases
ATGGGCCTTCTTTTGGGGCAGCGACTCCGCTCTTGGGGGCAACCGGCTCCTCTGCAGTGGTGGCGCGTTTTGCCGGTGAG
CAGTTCTGAGGGATCCCTGACTTTTGTCCAACCGGAACTGCCTCTCTACCACTCGTTCGCGTCAGTGGTGCGGAGCACTT
TTGCAGACGGGCTACTGCCCTGGTTGGCTCAGGGAACCGGGATCTCGGCTGAAGGGATCCTGCACATCTTCTCAGCTATG
GCCTGCTTGGCCATTCTGCTGTTGTGCTGGAGCTGGGGCAACTTCTGGAGTGCCGGTCTATGGGGACTCAGCCCCTGGGT
GTTGACCCAAGGGTTGGAGCCAGGCAGCGAGATTTTGGGCAGCCTGGTTTTGCTTTGCAGTTGTGGTGTTGGGCCGGGAT
CCACCTTGCGCTGGTGGGGTCTGGCCTTAGCTTGTGCCCTGTCTTATAAGGTTTGGCCCTTGGCTCTGCTCTGGGCGGGG
CTGTGGACGAGCCAGCAGTGGCCACGGCAACCGTTGCGTTCGCGTCAGCGGCTCGGAATATCAGGACTGCTTTTGCTGCT
GCTGGTGATGGGGCTTTCCTGGCTGGGACGGTTTAATTTGCCGGCTACCTCTGCTGAGGTGATTCCCCATCCTCTCAGCT
CCCAAGGTGGCTTGGCCGTTTTGGCTACTTTGATGCTGCCCTTGGGGTTGAGCTTGGTGCGGCTGGGCTGGCCTTGGGCG
GAACGGCAACAAGCCCTGCTCAGCTTGGCCGGCTTGGGCCATGTCCTCTGGGTGGGAGTGCTGGCAGCAGTGTTTTGGGA
TCCCCAAGTGAACACCCTGCAGCAAAGTGCTCGCTGGGGTTTGGTGGTGCTCCCCTTCCTATGCCTGAGCGCCGGCGGCG
TCTTGGCTGAGATCCCCTACCGGAGCTGGCGGCGGGTTTTGGGATCCCTACTCCTGGGCAGTTCTTTCTTGTTATCGTGG
CAGGCATTGGCCTAA

Upstream 100 bases:

>100_bases
CGGCTCATTTCCCCACCTGGGGTCGTCCAACAGGGACAACCATCGCCGTCGGCGTTTGGTTGGTTTTGGTTTCATGGGCC
ACTGGCTGCTATGGGGAGGG

Downstream 100 bases:

>100_bases
GGTATTCTTTCTCTTGCTTGCCATGACCCAGACCTCGTCCGCATCGGCACCGCGTAGCACTTCGCGGCCCTTGTTGCAAA
CCCTTTTTGCCCAACGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MGLLLGQRLRSWGQPAPLQWWRVLPVSSSEGSLTFVQPELPLYHSFASVVRSTFADGLLPWLAQGTGISAEGILHIFSAM
ACLAILLLCWSWGNFWSAGLWGLSPWVLTQGLEPGSEILGSLVLLCSCGVGPGSTLRWWGLALACALSYKVWPLALLWAG
LWTSQQWPRQPLRSRQRLGISGLLLLLLVMGLSWLGRFNLPATSAEVIPHPLSSQGGLAVLATLMLPLGLSLVRLGWPWA
ERQQALLSLAGLGHVLWVGVLAAVFWDPQVNTLQQSARWGLVVLPFLCLSAGGVLAEIPYRSWRRVLGSLLLGSSFLLSW
QALA

Sequences:

>Translated_324_residues
MGLLLGQRLRSWGQPAPLQWWRVLPVSSSEGSLTFVQPELPLYHSFASVVRSTFADGLLPWLAQGTGISAEGILHIFSAM
ACLAILLLCWSWGNFWSAGLWGLSPWVLTQGLEPGSEILGSLVLLCSCGVGPGSTLRWWGLALACALSYKVWPLALLWAG
LWTSQQWPRQPLRSRQRLGISGLLLLLLVMGLSWLGRFNLPATSAEVIPHPLSSQGGLAVLATLMLPLGLSLVRLGWPWA
ERQQALLSLAGLGHVLWVGVLAAVFWDPQVNTLQQSARWGLVVLPFLCLSAGGVLAEIPYRSWRRVLGSLLLGSSFLLSW
QALA
>Mature_323_residues
GLLLGQRLRSWGQPAPLQWWRVLPVSSSEGSLTFVQPELPLYHSFASVVRSTFADGLLPWLAQGTGISAEGILHIFSAMA
CLAILLLCWSWGNFWSAGLWGLSPWVLTQGLEPGSEILGSLVLLCSCGVGPGSTLRWWGLALACALSYKVWPLALLWAGL
WTSQQWPRQPLRSRQRLGISGLLLLLLVMGLSWLGRFNLPATSAEVIPHPLSSQGGLAVLATLMLPLGLSLVRLGWPWAE
RQQALLSLAGLGHVLWVGVLAAVFWDPQVNTLQQSARWGLVVLPFLCLSAGGVLAEIPYRSWRRVLGSLLLGSSFLLSWQ
ALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35252; Mature: 35121

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLLGQRLRSWGQPAPLQWWRVLPVSSSEGSLTFVQPELPLYHSFASVVRSTFADGLLP
CCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
WLAQGTGISAEGILHIFSAMACLAILLLCWSWGNFWSAGLWGLSPWVLTQGLEPGSEILG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHCCCCCHHHHHH
SLVLLCSCGVGPGSTLRWWGLALACALSYKVWPLALLWAGLWTSQQWPRQPLRSRQRLGI
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
SGLLLLLLVMGLSWLGRFNLPATSAEVIPHPLSSQGGLAVLATLMLPLGLSLVRLGWPWA
HHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
ERQQALLSLAGLGHVLWVGVLAAVFWDPQVNTLQQSARWGLVVLPFLCLSAGGVLAEIPY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCH
RSWRRVLGSLLLGSSFLLSWQALA
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLLLGQRLRSWGQPAPLQWWRVLPVSSSEGSLTFVQPELPLYHSFASVVRSTFADGLLP
CCHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA